RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 GAGE2AQ6NT46 116 aa5.67□□□□□ -1.5
CLSTN3-203ENST00000534830 Q6ZRX8 168 aa5.67□□□□□ -1.5
CLSTN3-203ENST00000534830 SSBP3-AS1Q7Z2R9 100 aa5.67□□□□□ -1.5
CLSTN3-203ENST00000534830 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
CLSTN3-203ENST00000534830 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
CLSTN3-203ENST00000534830 LITAFQ99732 161 aa5.65□□□□□ -1.5
CLSTN3-203ENST00000534830 MIEN1Q9BRT3 115 aa5.65□□□□□ -1.5
CLSTN3-203ENST00000534830 TRAV23DV6A0A075B6W5 121 aa5.64□□□□□ -1.51
CLSTN3-203ENST00000534830 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.64□□□□□ -1.51
CLSTN3-203ENST00000534830 SYS1-DBNDD2H3BUS1 97 aa5.64□□□□□ -1.51
CLSTN3-203ENST00000534830 MOBPQ13875 183 aa5.64□□□□□ -1.51
CLSTN3-203ENST00000534830 S100A7L2Q5SY68 101 aa5.64□□□□□ -1.51
CLSTN3-203ENST00000534830 Q8N377 158 aa5.64□□□□□ -1.51
CLSTN3-203ENST00000534830 IGLV9-49A0A0B4J1Y8 123 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 C5orf52A6NGY3 159 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 ZNF73O43830 326 aaPredicted RBP5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST1H2BKO60814 126 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST1H2BJP06899 126 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST1H2BOP23527 126 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST1H2BBP33778 126 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST1H2BDP58876 126 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST1H2BCP62807 126 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 JOSD1Q15040 202 aaPredicted RBP5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST2H2BEQ16778 126 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 LINC01545Q5VT33 79 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST1H2BHQ93079 126 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST1H2BNQ99877 126 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 HIST1H2BMQ99879 126 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 KRTAP4-1Q9BYQ7 146 aa5.63□□□□□ -1.51
CLSTN3-203ENST00000534830 TIMM17BO60830 172 aa5.62□□□□□ -1.51
CLSTN3-203ENST00000534830 NPC2P61916 151 aa5.62□□□□□ -1.51
CLSTN3-203ENST00000534830 ASB16-AS1Q495Z4 193 aa5.62□□□□□ -1.51
CLSTN3-203ENST00000534830 LINC00308Q8TCZ7 52 aa5.61□□□□□ -1.51
CLSTN3-203ENST00000534830 SPANXCQ9NY87 97 aa5.61□□□□□ -1.51
CLSTN3-203ENST00000534830 PET117Q6UWS5 81 aa5.6□□□□□ -1.51
CLSTN3-203ENST00000534830 ST20-AS1Q8NBB2 130 aa5.6□□□□□ -1.51
CLSTN3-203ENST00000534830 SLC25A20O43772 301 aa5.59□□□□□ -1.51
CLSTN3-203ENST00000534830 SPRR1BP22528 89 aa5.59□□□□□ -1.51
CLSTN3-203ENST00000534830 CBY1Q9Y3M2 126 aa5.59□□□□□ -1.51
CLSTN3-203ENST00000534830 C3orf79P0CE67 100 aa5.58□□□□□ -1.52
CLSTN3-203ENST00000534830 SEC61BP60468 96 aaKnown RBP5.58□□□□□ -1.52
CLSTN3-203ENST00000534830 TTTY13Q9BZ97 58 aa5.58□□□□□ -1.52
CLSTN3-203ENST00000534830 ZNF815PA8K554 130 aa5.57□□□□□ -1.52
CLSTN3-203ENST00000534830 CFC1BP0CG36 223 aa5.57□□□□□ -1.52
CLSTN3-203ENST00000534830 HINT1P49773 126 aaPredicted RBP5.57□□□□□ -1.52
CLSTN3-203ENST00000534830 COA6Q5JTJ3 125 aaKnown RBP5.57□□□□□ -1.52
CLSTN3-203ENST00000534830 ELOF1P60002 83 aaKnown RBP5.56□□□□□ -1.52
CLSTN3-203ENST00000534830 XP32Q5T750 250 aa5.56□□□□□ -1.52
CLSTN3-203ENST00000534830 LCE2CQ5TA81 110 aa5.56□□□□□ -1.52
CLSTN3-203ENST00000534830 C9orf153Q5TBE3 101 aa5.56□□□□□ -1.52
CLSTN3-203ENST00000534830 SPANXDQ9BXN6 97 aa5.56□□□□□ -1.52
CLSTN3-203ENST00000534830 DHRS4-AS1Q9P1J3 65 aa5.56□□□□□ -1.52
CLSTN3-203ENST00000534830 LINC00518Q8N0U6 118 aa5.55□□□□□ -1.52
CLSTN3-203ENST00000534830 OR13C6PQ8NH95 151 aa5.55□□□□□ -1.52
CLSTN3-203ENST00000534830 MT1HP80294 61 aa5.54□□□□□ -1.52
CLSTN3-203ENST00000534830 C6orf99Q4VX62 202 aa5.53□□□□□ -1.52
CLSTN3-203ENST00000534830 SLC25A34Q6PIV7 304 aa5.53□□□□□ -1.52
CLSTN3-203ENST00000534830 TRBV7-6A0A0J9YX20 115 aa5.52□□□□□ -1.53
CLSTN3-203ENST00000534830 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
CLSTN3-203ENST00000534830 COX7BP24311 80 aa5.52□□□□□ -1.53
CLSTN3-203ENST00000534830 ANKRD39Q53RE8 183 aa5.52□□□□□ -1.53
CLSTN3-203ENST00000534830 IFITM1P13164 125 aa5.51□□□□□ -1.53
CLSTN3-203ENST00000534830 KRTAP10-6P60371 365 aaPredicted RBP5.51□□□□□ -1.53
CLSTN3-203ENST00000534830 KRTDAPP60985 99 aa5.51□□□□□ -1.53
CLSTN3-203ENST00000534830 SMIM29Q86T20 159 aa5.51□□□□□ -1.53
CLSTN3-203ENST00000534830 LAMTOR3Q9UHA4 124 aa5.51□□□□□ -1.53
CLSTN3-203ENST00000534830 CD164Q04900 197 aa5.5□□□□□ -1.53
CLSTN3-203ENST00000534830 Q6ZVH6 145 aa5.5□□□□□ -1.53
CLSTN3-203ENST00000534830 IGLV5-48A0A075B6I7 105 aa5.49□□□□□ -1.53
CLSTN3-203ENST00000534830 TEX49A0A1B0GTD5 131 aa5.49□□□□□ -1.53
CLSTN3-203ENST00000534830 A0A1B0GWB2 263 aa5.49□□□□□ -1.53
CLSTN3-203ENST00000534830 Q5XG85 94 aa5.49□□□□□ -1.53
CLSTN3-203ENST00000534830 HRCT1Q6UXD1 115 aa5.49□□□□□ -1.53
CLSTN3-203ENST00000534830 SCGB1D4Q6XE38 83 aa5.49□□□□□ -1.53
CLSTN3-203ENST00000534830 MUSTN1Q8IVN3 82 aa5.49□□□□□ -1.53
CLSTN3-203ENST00000534830 LIMD2Q9BT23 127 aa5.49□□□□□ -1.53
CLSTN3-203ENST00000534830 TAL2Q16559 108 aa5.48□□□□□ -1.53
CLSTN3-203ENST00000534830 KRTAP19-2Q3LHN2 52 aa5.48□□□□□ -1.53
CLSTN3-203ENST00000534830 PCP2Q8IVA1 136 aa5.48□□□□□ -1.53
CLSTN3-203ENST00000534830 COPS9Q8WXC6 57 aa5.48□□□□□ -1.53
CLSTN3-203ENST00000534830 C20orf202A1L168 122 aa5.47□□□□□ -1.53
CLSTN3-203ENST00000534830 Q1RN00 199 aa5.47□□□□□ -1.53
CLSTN3-203ENST00000534830 ATOH7Q8N100 152 aa5.47□□□□□ -1.53
CLSTN3-203ENST00000534830 DEFB105AQ8NG35 78 aa5.47□□□□□ -1.53
CLSTN3-203ENST00000534830 PRO1933Q9H354 126 aa5.47□□□□□ -1.53
CLSTN3-203ENST00000534830 M0R2T5 61 aa5.46□□□□□ -1.54
CLSTN3-203ENST00000534830 AKR1D1P51857 326 aa5.46□□□□□ -1.54
CLSTN3-203ENST00000534830 HIST3H2BBQ8N257 126 aa5.46□□□□□ -1.54
CLSTN3-203ENST00000534830 TMA7Q9Y2S6 64 aaKnown RBP5.46□□□□□ -1.54
CLSTN3-203ENST00000534830 A4D1N5 150 aa5.45□□□□□ -1.54
CLSTN3-203ENST00000534830 SNRPEP62304 92 aaKnown RBP5.45□□□□□ -1.54
CLSTN3-203ENST00000534830 SMIM11BQ8TCY0 68 aa5.45□□□□□ -1.54
CLSTN3-203ENST00000534830 TRAV13-2A0A0B4J235 113 aa5.44□□□□□ -1.54
CLSTN3-203ENST00000534830 A6NDN8 102 aa5.44□□□□□ -1.54
CLSTN3-203ENST00000534830 H7C2G1 150 aa5.44□□□□□ -1.54
CLSTN3-203ENST00000534830 C1orf195Q5TG92 126 aa5.44□□□□□ -1.54
CLSTN3-203ENST00000534830 HIST1H2BLQ99880 126 aa5.44□□□□□ -1.54
CLSTN3-203ENST00000534830 A0A0G2JQZ4 141 aa5.43□□□□□ -1.54
CLSTN3-203ENST00000534830 C9orf92A6NGG3 77 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms