RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 FAM168BA1KXE4 195 aa4.72□□□□□ -1.65
CASP4-212ENST00000533730 LINC00158P58513 81 aa4.72□□□□□ -1.65
CASP4-212ENST00000533730 PRR3P79522 188 aaKnown RBP4.72□□□□□ -1.65
CASP4-212ENST00000533730 MEIG1Q5JSS6 88 aa4.72□□□□□ -1.65
CASP4-212ENST00000533730 MRPL55Q7Z7F7 128 aaKnown RBP4.72□□□□□ -1.65
CASP4-212ENST00000533730 HIST3H2BBQ8N257 126 aa4.72□□□□□ -1.65
CASP4-212ENST00000533730 APOBP04114 4563 aaKnown RBP4.71□□□□□ -1.66
CASP4-212ENST00000533730 A6NDN8 102 aa4.71□□□□□ -1.66
CASP4-212ENST00000533730 KRTAP16-1A8MUX0 517 aa4.71□□□□□ -1.66
CASP4-212ENST00000533730 UBE2BP63146 152 aa4.71□□□□□ -1.66
CASP4-212ENST00000533730 TAL2Q16559 108 aa4.71□□□□□ -1.66
CASP4-212ENST00000533730 PHF5AQ7RTV0 110 aaKnown RBP4.71□□□□□ -1.66
CASP4-212ENST00000533730 SND1-IT1Q9HBX3 110 aa4.71□□□□□ -1.66
CASP4-212ENST00000533730 HSPG2P98160 4391 aa4.71□□□□□ -1.66
CASP4-212ENST00000533730 TSPEAR-AS2P59090 65 aa4.7□□□□□ -1.66
CASP4-212ENST00000533730 KRTAP7-1Q8IUC3 87 aa4.7□□□□□ -1.66
CASP4-212ENST00000533730 HIST1H2BLQ99880 126 aa4.7□□□□□ -1.66
CASP4-212ENST00000533730 C22orf24Q9Y442 160 aa4.7□□□□□ -1.66
CASP4-212ENST00000533730 SMIM13P0DJ93 91 aa4.69□□□□□ -1.66
CASP4-212ENST00000533730 PSORS1C2Q9UIG4 136 aa4.69□□□□□ -1.66
CASP4-212ENST00000533730 KRTAP4-16G5E9R7 235 aaPredicted RBP4.68□□□□□ -1.66
CASP4-212ENST00000533730 C1orf137Q5JT78 98 aa4.68□□□□□ -1.66
CASP4-212ENST00000533730 SPINK6Q6UWN8 80 aa4.68□□□□□ -1.66
CASP4-212ENST00000533730 MIR7-3HGQ8N6C7 128 aa4.68□□□□□ -1.66
CASP4-212ENST00000533730 TYMSOSQ8TAI1 123 aa4.68□□□□□ -1.66
CASP4-212ENST00000533730 MIEN1Q9BRT3 115 aa4.67□□□□□ -1.66
CASP4-212ENST00000533730 IGKV2D-26A0A0A0MRZ7 120 aa4.66□□□□□ -1.66
CASP4-212ENST00000533730 LOC107984156A0A0G2JMH3 177 aa4.66□□□□□ -1.66
CASP4-212ENST00000533730 ZNF815PA8K554 130 aa4.66□□□□□ -1.66
CASP4-212ENST00000533730 TIMM17BO60830 172 aa4.66□□□□□ -1.66
CASP4-212ENST00000533730 IGLV7-43P04211 117 aa4.66□□□□□ -1.66
CASP4-212ENST00000533730 ARL17AQ8IVW1 177 aa4.66□□□□□ -1.66
CASP4-212ENST00000533730 BOD1L2Q8IYS8 172 aa4.66□□□□□ -1.66
CASP4-212ENST00000533730 CEND1Q8N111 149 aa4.66□□□□□ -1.66
CASP4-212ENST00000533730 LINC00167Q96N53 147 aa4.66□□□□□ -1.66
CASP4-212ENST00000533730 DNAH8Q96JB1 4490 aa4.65□□□□□ -1.66
CASP4-212ENST00000533730 M0R378 163 aa4.65□□□□□ -1.67
CASP4-212ENST00000533730 ATOH7Q8N100 152 aa4.65□□□□□ -1.67
CASP4-212ENST00000533730 DIRC1Q969H9 104 aa4.65□□□□□ -1.67
CASP4-212ENST00000533730 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.67
CASP4-212ENST00000533730 IGLV1-50A0A075B6I6 118 aa4.64□□□□□ -1.67
CASP4-212ENST00000533730 TMEM238C9JI98 176 aa4.64□□□□□ -1.67
CASP4-212ENST00000533730 BCE1O60756 84 aa4.64□□□□□ -1.67
CASP4-212ENST00000533730 S100A12P80511 92 aa4.64□□□□□ -1.67
CASP4-212ENST00000533730 C5orf47Q569G3 176 aa4.64□□□□□ -1.67
CASP4-212ENST00000533730 SCGB1D4Q6XE38 83 aa4.64□□□□□ -1.67
CASP4-212ENST00000533730 KRTAP11-1Q8IUC1 163 aa4.64□□□□□ -1.67
CASP4-212ENST00000533730 COPS9Q8WXC6 57 aa4.64□□□□□ -1.67
CASP4-212ENST00000533730 IGKV2-28A0A075B6P5 120 aa4.63□□□□□ -1.67
CASP4-212ENST00000533730 TRBV10-2A0A0K0K1G8 114 aa4.63□□□□□ -1.67
CASP4-212ENST00000533730 NDUFC2O95298 119 aa4.63□□□□□ -1.67
CASP4-212ENST00000533730 IGKV2D-28P01615 120 aa4.63□□□□□ -1.67
CASP4-212ENST00000533730 RPL28P46779 137 aaKnown RBP4.63□□□□□ -1.67
CASP4-212ENST00000533730 DAND5Q8N907 189 aa4.63□□□□□ -1.67
CASP4-212ENST00000533730 SPANXB1Q9NS25 103 aaPredicted RBP4.63□□□□□ -1.67
CASP4-212ENST00000533730 FLG2Q5D862 2391 aaPredicted RBP4.62□□□□□ -1.67
CASP4-212ENST00000533730 H0Y9J4 135 aa4.62□□□□□ -1.67
CASP4-212ENST00000533730 ZNF861PO60384 105 aa4.62□□□□□ -1.67
CASP4-212ENST00000533730 Q6ZVH6 145 aa4.62□□□□□ -1.67
CASP4-212ENST00000533730 Q8NDZ9 215 aa4.62□□□□□ -1.67
CASP4-212ENST00000533730 TMEM126AQ9H061 195 aa4.62□□□□□ -1.67
CASP4-212ENST00000533730 CBY1Q9Y3M2 126 aa4.62□□□□□ -1.67
CASP4-212ENST00000533730 NCR3O14931 201 aa4.61□□□□□ -1.67
CASP4-212ENST00000533730 IFITM1P13164 125 aa4.61□□□□□ -1.67
CASP4-212ENST00000533730 UBE2AP49459 152 aa4.61□□□□□ -1.67
CASP4-212ENST00000533730 LINC00308Q8TCZ7 52 aa4.61□□□□□ -1.67
CASP4-212ENST00000533730 SPANXDQ9BXN6 97 aa4.61□□□□□ -1.67
CASP4-212ENST00000533730 TTTY13Q9BZ97 58 aa4.61□□□□□ -1.67
CASP4-212ENST00000533730 SPANXCQ9NY87 97 aa4.61□□□□□ -1.67
CASP4-212ENST00000533730 FAT1Q14517 4588 aa4.6□□□□□ -1.67
CASP4-212ENST00000533730 MT3P25713 68 aa4.6□□□□□ -1.67
CASP4-212ENST00000533730 DDTP30046 118 aa4.6□□□□□ -1.67
CASP4-212ENST00000533730 S100A7L2Q5SY68 101 aa4.6□□□□□ -1.67
CASP4-212ENST00000533730 FAM19A1Q7Z5A9 133 aa4.6□□□□□ -1.67
CASP4-212ENST00000533730 PCP2Q8IVA1 136 aa4.6□□□□□ -1.67
CASP4-212ENST00000533730 LINC01600Q96MT4 127 aa4.6□□□□□ -1.67
CASP4-212ENST00000533730 KCNQ1DNQ9H478 68 aa4.6□□□□□ -1.67
CASP4-212ENST00000533730 VPS13BQ7Z7G8 4022 aa4.59□□□□□ -1.67
CASP4-212ENST00000533730 TRBV10-3A0A0K0K1G6 114 aa4.59□□□□□ -1.67
CASP4-212ENST00000533730 NPC2P61916 151 aa4.59□□□□□ -1.67
CASP4-212ENST00000533730 JOSD1Q15040 202 aaPredicted RBP4.59□□□□□ -1.67
CASP4-212ENST00000533730 SOSTDC1Q6X4U4 206 aa4.59□□□□□ -1.67
CASP4-212ENST00000533730 LINC00337Q8N6G1 96 aa4.59□□□□□ -1.67
CASP4-212ENST00000533730 ETDCA0A1B0GVM5 59 aa4.58□□□□□ -1.68
CASP4-212ENST00000533730 SPRR1AP35321 89 aa4.58□□□□□ -1.68
CASP4-212ENST00000533730 KRTAP13-1Q8IUC0 172 aa4.58□□□□□ -1.68
CASP4-212ENST00000533730 VAMP8Q9BV40 100 aa4.58□□□□□ -1.68
CASP4-212ENST00000533730 DLEU1O43261 78 aa4.57□□□□□ -1.68
CASP4-212ENST00000533730 IGLV6-57P01721 117 aa4.57□□□□□ -1.68
CASP4-212ENST00000533730 COX8AP10176 69 aa4.57□□□□□ -1.68
CASP4-212ENST00000533730 ABCA13Q86UQ4 5058 aa4.56□□□□□ -1.68
CASP4-212ENST00000533730 PCLOQ9Y6V0 5065 aa4.56□□□□□ -1.68
CASP4-212ENST00000533730 TRAV23DV6A0A075B6W5 121 aa4.56□□□□□ -1.68
CASP4-212ENST00000533730 MT1HL1P0DM35 61 aa4.56□□□□□ -1.68
CASP4-212ENST00000533730 HINT1P49773 126 aaPredicted RBP4.56□□□□□ -1.68
CASP4-212ENST00000533730 PRLHP81277 87 aa4.56□□□□□ -1.68
CASP4-212ENST00000533730 SPATA45Q537H7 98 aa4.56□□□□□ -1.68
CASP4-212ENST00000533730 OR13C6PQ8NH95 151 aa4.56□□□□□ -1.68
CASP4-212ENST00000533730 DMBT1Q9UGM3 2413 aaPredicted RBP4.56□□□□□ -1.68
CASP4-212ENST00000533730 FAM240AA0A1B0GVK7 77 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms