RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 PPP3R2Q96LZ3 170 aa-0.57□□□□□ -2.5
ATM-220ENST00000533526 SPANXA1Q9NS26 97 aa-0.57□□□□□ -2.5
ATM-220ENST00000533526 PSENENQ9NZ42 101 aa-0.57□□□□□ -2.5
ATM-220ENST00000533526 PRO1854Q9UHT4 67 aa-0.57□□□□□ -2.5
ATM-220ENST00000533526 MAGI2Q86UL8 1455 aa-0.57□□□□□ -2.5
ATM-220ENST00000533526 DDX60LQ5H9U9 1706 aaKnown RBP-0.58□□□□□ -2.5
ATM-220ENST00000533526 PARP4Q9UKK3 1724 aaKnown RBP-0.58□□□□□ -2.5
ATM-220ENST00000533526 CELSR3Q9NYQ7 3312 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 NBEAQ8NFP9 2946 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 F6UZH7 168 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 NDUFA3O95167 84 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 APOC3P02656 99 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 SMIM6P0DI80 62 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 CCDC58Q4VC31 144 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 C8orf59Q8N0T1 100 aaPredicted RBP-0.58□□□□□ -2.5
ATM-220ENST00000533526 C2orf88Q9BSF0 95 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 LINC00846Q9NV44 126 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 SPANXCQ9NY87 97 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 HIGD1BQ9P298 99 aa-0.58□□□□□ -2.5
ATM-220ENST00000533526 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.58□□□□□ -2.5
ATM-220ENST00000533526 NEXMIFQ5QGS0 1516 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 ITSN2Q9NZM3 1697 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 EYSQ5T1H1 3165 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 ABCC10Q5T3U5 1492 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 ABCA13Q86UQ4 5058 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 RGPD8O14715 1765 aaPredicted RBP-0.59□□□□□ -2.5
ATM-220ENST00000533526 RGPD5Q99666 1765 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 TRBV25-1A0A075B6N4 114 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 A0A1B0GWA3 101 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 CRYM-AS1A6NIL9 109 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 H0Y9P7 68 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 H0YAA0 97 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 SYS1-DBNDD2H3BUS1 97 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 SPINK4O60575 86 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 HMGN1P05114 100 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 IGLC2P0DOY2 106 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 IGLC3P0DOY3 106 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 S100A1P23297 94 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 PPP3R1P63098 170 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 RPL13AP3Q6NVV1 102 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 C14orf144Q96I85 54 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 MGAM2Q2M2H8 2515 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 NWD1Q149M9 1564 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 KTN1Q86UP2 1357 aaKnown RBP-0.59□□□□□ -2.5
ATM-220ENST00000533526 FAM135AQ9P2D6 1515 aa-0.59□□□□□ -2.5
ATM-220ENST00000533526 PPLO60437 1756 aa-0.6□□□□□ -2.5
ATM-220ENST00000533526 RNF17Q9BXT8 1623 aaKnown RBP-0.6□□□□□ -2.5
ATM-220ENST00000533526 DIP2BQ9P265 1576 aa-0.6□□□□□ -2.51
ATM-220ENST00000533526 LOC285095A0A1B0GVY8 99 aa-0.6□□□□□ -2.51
ATM-220ENST00000533526 F8WEM9 126 aa-0.6□□□□□ -2.51
ATM-220ENST00000533526 ARMS2P0C7Q2 107 aa-0.6□□□□□ -2.51
ATM-220ENST00000533526 SAA2P0DJI9 122 aaPredicted RBP-0.6□□□□□ -2.51
ATM-220ENST00000533526 S100A12P80511 92 aa-0.6□□□□□ -2.51
ATM-220ENST00000533526 TMEM203Q969S6 136 aa-0.6□□□□□ -2.51
ATM-220ENST00000533526 TRGV9Q99603 122 aa-0.6□□□□□ -2.51
ATM-220ENST00000533526 FAIMQ9NVQ4 179 aa-0.6□□□□□ -2.51
ATM-220ENST00000533526 IER3IP1Q9Y5U9 82 aa-0.6□□□□□ -2.51
ATM-220ENST00000533526 ZC3H13Q5T200 1668 aaKnown RBP-0.6□□□□□ -2.51
ATM-220ENST00000533526 CFAP43Q8NDM7 1665 aa-0.6□□□□□ -2.51
ATM-220ENST00000533526 MTORP42345 2549 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 TLN2Q9Y4G6 2542 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 ITSN1Q15811 1721 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 ATP6V1G2-DDX39BF2Z307 99 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 H3BNG1 76 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 GNGT2O14610 69 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 TRAPPC2P0DI81 140 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 TRAPPC2BP0DI82 140 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 GNG4P50150 75 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 C20orf78Q9BR46 151 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 PRO1933Q9H354 126 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 UQCR10Q9UDW1 63 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 UTP20O75691 2785 aaKnown RBP-0.61□□□□□ -2.51
ATM-220ENST00000533526 PIK3C2BO00750 1634 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 DOPEY1Q5JWR5 2465 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 NRAPQ86VF7 1730 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 RAPGEF2Q9Y4G8 1499 aa-0.61□□□□□ -2.51
ATM-220ENST00000533526 BPTFQ12830 3046 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 MGAQ8IWI9 3026 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 NAP1L6A6NFF2 107 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 FAM24AA6NFZ4 105 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 I3L3M4 83 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 SMR3BP02814 79 aaPredicted RBP-0.62□□□□□ -2.51
ATM-220ENST00000533526 COX6CP09669 75 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 COX8AP10176 69 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 ATP5EP56381 51 aaPredicted RBP-0.62□□□□□ -2.51
ATM-220ENST00000533526 PSMG4Q5JS54 123 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 NCMAPQ5T1S8 102 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 ALKAL2Q6UX46 152 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 HEPN1Q6WQI6 88 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 TSC22D3Q99576 134 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 UBE2D4Q9Y2X8 147 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 FRYQ5TBA9 3013 aa-0.62□□□□□ -2.51
ATM-220ENST00000533526 COL6A5A8TX70 2615 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 USP9XQ93008 2570 aaPredicted RBP-0.63□□□□□ -2.51
ATM-220ENST00000533526 TRBV7-7A0A0K0K1E9 115 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 S100A3P33764 101 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 S100A10P60903 97 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 MT1HP80294 61 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 COPS9Q8WXC6 57 aa-0.63□□□□□ -2.51
ATM-220ENST00000533526 USMG5Q96IX5 58 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms