RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 Q6ZSA8 131 aa9□□□□□ -0.97
TRIM3-212ENST00000533064 CLEC2BQ92478 149 aa9□□□□□ -0.97
TRIM3-212ENST00000533064 PRO0461Q9UI25 63 aa9□□□□□ -0.97
TRIM3-212ENST00000533064 C22orf24Q9Y442 160 aa9□□□□□ -0.97
TRIM3-212ENST00000533064 LST1O00453 97 aa8.99□□□□□ -0.97
TRIM3-212ENST00000533064 MRPL55Q7Z7F7 128 aaKnown RBP8.99□□□□□ -0.97
TRIM3-212ENST00000533064 FAM30AQ9NZY2 134 aa8.99□□□□□ -0.97
TRIM3-212ENST00000533064 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
TRIM3-212ENST00000533064 PLAC8Q9NZF1 115 aa8.98□□□□□ -0.97
TRIM3-212ENST00000533064 H0YGX0 51 aa8.97□□□□□ -0.97
TRIM3-212ENST00000533064 KRTAP7-1Q8IUC3 87 aa8.97□□□□□ -0.97
TRIM3-212ENST00000533064 DNAH8Q96JB1 4490 aa8.97□□□□□ -0.97
TRIM3-212ENST00000533064 MTURNQ8N3F0 131 aa8.96□□□□□ -0.98
TRIM3-212ENST00000533064 C7orf33Q8WU49 177 aa8.96□□□□□ -0.98
TRIM3-212ENST00000533064 LINC00167Q96N53 147 aa8.96□□□□□ -0.98
TRIM3-212ENST00000533064 C9JAW5 83 aa8.95□□□□□ -0.98
TRIM3-212ENST00000533064 UBE2BP63146 152 aa8.95□□□□□ -0.98
TRIM3-212ENST00000533064 PHF5AQ7RTV0 110 aaKnown RBP8.95□□□□□ -0.98
TRIM3-212ENST00000533064 CIRBP-AS1Q8TBR5 109 aa8.95□□□□□ -0.98
TRIM3-212ENST00000533064 LRP1BQ9NZR2 4599 aa8.95□□□□□ -0.98
TRIM3-212ENST00000533064 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
TRIM3-212ENST00000533064 EPM2AB3EWF7 344 aa8.94□□□□□ -0.98
TRIM3-212ENST00000533064 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
TRIM3-212ENST00000533064 RPL37AP8A6NKH3 93 aa8.94□□□□□ -0.98
TRIM3-212ENST00000533064 TRACP01848 142 aa8.94□□□□□ -0.98
TRIM3-212ENST00000533064 FAM218AQ96MZ4 157 aa8.94□□□□□ -0.98
TRIM3-212ENST00000533064 DYNC1H1Q14204 4646 aaKnown RBP8.93□□□□□ -0.98
TRIM3-212ENST00000533064 SLC25A20O43772 301 aa8.93□□□□□ -0.98
TRIM3-212ENST00000533064 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
TRIM3-212ENST00000533064 C6orf99Q4VX62 202 aa8.92□□□□□ -0.98
TRIM3-212ENST00000533064 IGLV1-50A0A075B6I6 118 aa8.91□□□□□ -0.98
TRIM3-212ENST00000533064 TRAV23DV6A0A075B6W5 121 aa8.91□□□□□ -0.98
TRIM3-212ENST00000533064 LINC01600Q96MT4 127 aa8.91□□□□□ -0.98
TRIM3-212ENST00000533064 HAMPP81172 84 aa8.91□□□□□ -0.98
TRIM3-212ENST00000533064 H3BT86 120 aa8.9□□□□□ -0.98
TRIM3-212ENST00000533064 PRYO14603 147 aa8.9□□□□□ -0.98
TRIM3-212ENST00000533064 A0A1B0GX51 115 aa8.89□□□□□ -0.99
TRIM3-212ENST00000533064 ANKRD29Q8N6D5 301 aa8.89□□□□□ -0.99
TRIM3-212ENST00000533064 DIRC1Q969H9 104 aa8.89□□□□□ -0.99
TRIM3-212ENST00000533064 KCNQ1DNQ9H478 68 aa8.89□□□□□ -0.99
TRIM3-212ENST00000533064 ZNF73O43830 326 aaPredicted RBP8.88□□□□□ -0.99
TRIM3-212ENST00000533064 ETDBQ3ZM63 59 aa8.88□□□□□ -0.99
TRIM3-212ENST00000533064 TRBV7-6A0A0J9YX20 115 aa8.88□□□□□ -0.99
TRIM3-212ENST00000533064 DNAL4O96015 105 aa8.87□□□□□ -0.99
TRIM3-212ENST00000533064 REG3GQ6UW15 175 aa8.87□□□□□ -0.99
TRIM3-212ENST00000533064 SIGMAR1Q99720 223 aa8.87□□□□□ -0.99
TRIM3-212ENST00000533064 SNCGO76070 127 aa8.86□□□□□ -0.99
TRIM3-212ENST00000533064 XGP55808 180 aa8.86□□□□□ -0.99
TRIM3-212ENST00000533064 TEN1Q86WV5 123 aa8.86□□□□□ -0.99
TRIM3-212ENST00000533064 LINC00575Q6W349 94 aa8.85□□□□□ -0.99
TRIM3-212ENST00000533064 J3QR89 54 aa8.85□□□□□ -0.99
TRIM3-212ENST00000533064 ETDCA0A1B0GVM5 59 aa8.84□□□□□ -0.99
TRIM3-212ENST00000533064 CDK2AP2O75956 126 aa8.84□□□□□ -0.99
TRIM3-212ENST00000533064 COX7BP24311 80 aa8.84□□□□□ -0.99
TRIM3-212ENST00000533064 ELOF1P60002 83 aaKnown RBP8.84□□□□□ -0.99
TRIM3-212ENST00000533064 APOBP04114 4563 aaKnown RBP8.84□□□□□ -1
TRIM3-212ENST00000533064 BAALC-AS2P0C853 105 aa8.83□□□□□ -1
TRIM3-212ENST00000533064 KRTAP11-1Q8IUC1 163 aa8.83□□□□□ -1
TRIM3-212ENST00000533064 PSORS1C2Q9UIG4 136 aa8.83□□□□□ -1
TRIM3-212ENST00000533064 EPPK1P58107 5090 aaKnown RBP8.82□□□□□ -1
TRIM3-212ENST00000533064 SPRR1AP35321 89 aa8.81□□□□□ -1
TRIM3-212ENST00000533064 PPDPFLQ8WWR9 84 aa8.81□□□□□ -1
TRIM3-212ENST00000533064 hADV29S1A0JD25 119 aa8.81□□□□□ -1
TRIM3-212ENST00000533064 C1orf137Q5JT78 98 aa8.81□□□□□ -1
TRIM3-212ENST00000533064 FAM19A1Q7Z5A9 133 aa8.81□□□□□ -1
TRIM3-212ENST00000533064 BCE1O60756 84 aa8.8□□□□□ -1
TRIM3-212ENST00000533064 ORMDL1Q9P0S3 153 aa8.8□□□□□ -1
TRIM3-212ENST00000533064 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
TRIM3-212ENST00000533064 UBE2AP49459 152 aa8.79□□□□□ -1
TRIM3-212ENST00000533064 LINC00528Q8N1L1 170 aa8.79□□□□□ -1
TRIM3-212ENST00000533064 B5MCH6 92 aa8.78□□□□□ -1
TRIM3-212ENST00000533064 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
TRIM3-212ENST00000533064 Q6ZRX8 168 aa8.78□□□□□ -1
TRIM3-212ENST00000533064 TEX49A0A1B0GTD5 131 aa8.76□□□□□ -1.01
TRIM3-212ENST00000533064 RPL37AP61513 92 aaKnown RBP8.76□□□□□ -1.01
TRIM3-212ENST00000533064 VPS13BQ7Z7G8 4022 aa8.76□□□□□ -1.01
TRIM3-212ENST00000533064 INAFM2P0DMQ5 153 aa8.75□□□□□ -1.01
TRIM3-212ENST00000533064 PRLHP81277 87 aa8.75□□□□□ -1.01
TRIM3-212ENST00000533064 H0Y9J4 135 aa8.75□□□□□ -1.01
TRIM3-212ENST00000533064 H3BQ85 93 aa8.75□□□□□ -1.01
TRIM3-212ENST00000533064 TMEM256-PLSCR3K7ERE1 68 aa8.75□□□□□ -1.01
TRIM3-212ENST00000533064 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.75□□□□□ -1.01
TRIM3-212ENST00000533064 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
TRIM3-212ENST00000533064 IGLV7-43P04211 117 aa8.74□□□□□ -1.01
TRIM3-212ENST00000533064 Q6ZQY7 126 aa8.74□□□□□ -1.01
TRIM3-212ENST00000533064 DHRS4-AS1Q9P1J3 65 aa8.74□□□□□ -1.01
TRIM3-212ENST00000533064 HIGD2AQ9BW72 106 aa8.73□□□□□ -1.01
TRIM3-212ENST00000533064 GHRHP01286 108 aa8.72□□□□□ -1.01
TRIM3-212ENST00000533064 ZNF861PO60384 105 aa8.72□□□□□ -1.01
TRIM3-212ENST00000533064 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.02
TRIM3-212ENST00000533064 Q9BRP9 147 aa8.71□□□□□ -1.02
TRIM3-212ENST00000533064 HSPG2P98160 4391 aa8.7□□□□□ -1.02
TRIM3-212ENST00000533064 KRTAP13-1Q8IUC0 172 aa8.7□□□□□ -1.02
TRIM3-212ENST00000533064 OBSCN-AS1Q96MR7 158 aa8.7□□□□□ -1.02
TRIM3-212ENST00000533064 SRRM2Q9UQ35 2752 aaKnown RBP8.7□□□□□ -1.02
TRIM3-212ENST00000533064 RYR1P21817 5038 aa8.69□□□□□ -1.02
TRIM3-212ENST00000533064 SMCR5Q8TEV8 140 aa8.69□□□□□ -1.02
TRIM3-212ENST00000533064 JMJD7-PLA2G4BH0Y9G9 81 aa8.67□□□□□ -1.02
TRIM3-212ENST00000533064 Q5VSD8 79 aa8.67□□□□□ -1.02
TRIM3-212ENST00000533064 KIAA1109Q2LD37 5005 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms