RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 LINC01545Q5VT33 79 aa4.97□□□□□ -1.61
USF1-210ENST00000531842 GAGE2AQ6NT46 116 aa4.97□□□□□ -1.61
USF1-210ENST00000531842 SOSTDC1Q6X4U4 206 aa4.97□□□□□ -1.61
USF1-210ENST00000531842 ARL17AQ8IVW1 177 aa4.97□□□□□ -1.61
USF1-210ENST00000531842 MYMXA0A1B0GTQ4 84 aa4.96□□□□□ -1.62
USF1-210ENST00000531842 SPINK1P00995 79 aa4.96□□□□□ -1.62
USF1-210ENST00000531842 HERV-K104P63124 156 aa4.96□□□□□ -1.62
USF1-210ENST00000531842 LITAFQ99732 161 aa4.96□□□□□ -1.62
USF1-210ENST00000531842 MAP1LC3CQ9BXW4 147 aa4.96□□□□□ -1.62
USF1-210ENST00000531842 KCNQ1DNQ9H478 68 aa4.96□□□□□ -1.62
USF1-210ENST00000531842 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
USF1-210ENST00000531842 IGLV9-49A0A0B4J1Y8 123 aa4.95□□□□□ -1.62
USF1-210ENST00000531842 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
USF1-210ENST00000531842 E9PLD3 99 aa4.95□□□□□ -1.62
USF1-210ENST00000531842 C3orf79P0CE67 100 aa4.95□□□□□ -1.62
USF1-210ENST00000531842 SPRR1AP35321 89 aa4.95□□□□□ -1.62
USF1-210ENST00000531842 XP32Q5T750 250 aa4.95□□□□□ -1.62
USF1-210ENST00000531842 TTTY13Q9BZ97 58 aa4.95□□□□□ -1.62
USF1-210ENST00000531842 A0A0J9YXY3 114 aa4.94□□□□□ -1.62
USF1-210ENST00000531842 TRBV10-3A0A0K0K1G6 114 aa4.94□□□□□ -1.62
USF1-210ENST00000531842 MOBPQ13875 183 aa4.94□□□□□ -1.62
USF1-210ENST00000531842 NMUP48645 174 aa4.93□□□□□ -1.62
USF1-210ENST00000531842 PET117Q6UWS5 81 aa4.93□□□□□ -1.62
USF1-210ENST00000531842 TMEM238LA0A1B0GVL6 79 aa4.92□□□□□ -1.62
USF1-210ENST00000531842 B5MCH6 92 aa4.92□□□□□ -1.62
USF1-210ENST00000531842 DDTP30046 118 aa4.92□□□□□ -1.62
USF1-210ENST00000531842 LINC00483Q53H64 154 aa4.92□□□□□ -1.62
USF1-210ENST00000531842 PCOTHQ58A44 107 aa4.92□□□□□ -1.62
USF1-210ENST00000531842 Q8N377 158 aa4.92□□□□□ -1.62
USF1-210ENST00000531842 MIEN1Q9BRT3 115 aa4.92□□□□□ -1.62
USF1-210ENST00000531842 A6NJY4 79 aa4.91□□□□□ -1.62
USF1-210ENST00000531842 SLC25A20O43772 301 aa4.91□□□□□ -1.62
USF1-210ENST00000531842 ERC2-IT1O76042 136 aa4.91□□□□□ -1.62
USF1-210ENST00000531842 LGALS3P17931 250 aaKnown RBP4.91□□□□□ -1.62
USF1-210ENST00000531842 HERVK_113P61574 105 aa4.91□□□□□ -1.62
USF1-210ENST00000531842 NPC2P61916 151 aa4.91□□□□□ -1.62
USF1-210ENST00000531842 S100A7L2Q5SY68 101 aa4.91□□□□□ -1.62
USF1-210ENST00000531842 SSBP3-AS1Q7Z2R9 100 aa4.91□□□□□ -1.62
USF1-210ENST00000531842 IGLV8-61A0A075B6I0 122 aa4.9□□□□□ -1.63
USF1-210ENST00000531842 IGLV6-57P01721 117 aa4.9□□□□□ -1.63
USF1-210ENST00000531842 ANKRD39Q53RE8 183 aa4.9□□□□□ -1.63
USF1-210ENST00000531842 C9orf153Q5TBE3 101 aa4.9□□□□□ -1.63
USF1-210ENST00000531842 Q9BRP9 147 aa4.9□□□□□ -1.63
USF1-210ENST00000531842 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
USF1-210ENST00000531842 TRBV10-2A0A0K0K1G8 114 aa4.89□□□□□ -1.63
USF1-210ENST00000531842 NDUFC2O95298 119 aa4.89□□□□□ -1.63
USF1-210ENST00000531842 CFC1BP0CG36 223 aa4.89□□□□□ -1.63
USF1-210ENST00000531842 KRTDAPP60985 99 aa4.89□□□□□ -1.63
USF1-210ENST00000531842 JOSD1Q15040 202 aaPredicted RBP4.89□□□□□ -1.63
USF1-210ENST00000531842 SPANXB1Q9NS25 103 aaPredicted RBP4.89□□□□□ -1.63
USF1-210ENST00000531842 C9orf92A6NGG3 77 aa4.88□□□□□ -1.63
USF1-210ENST00000531842 M0R2T5 61 aa4.88□□□□□ -1.63
USF1-210ENST00000531842 RPS29P62273 56 aaKnown RBP4.88□□□□□ -1.63
USF1-210ENST00000531842 Q6ZRX8 168 aa4.88□□□□□ -1.63
USF1-210ENST00000531842 ATOH7Q8N100 152 aa4.88□□□□□ -1.63
USF1-210ENST00000531842 HIST3H2BBQ8N257 126 aa4.88□□□□□ -1.63
USF1-210ENST00000531842 LINC00308Q8TCZ7 52 aa4.88□□□□□ -1.63
USF1-210ENST00000531842 TRAV23DV6A0A075B6W5 121 aa4.87□□□□□ -1.63
USF1-210ENST00000531842 HIST1H2BLQ99880 126 aa4.87□□□□□ -1.63
USF1-210ENST00000531842 USH2AO75445 5202 aa4.87□□□□□ -1.63
USF1-210ENST00000531842 ZNF815PA8K554 130 aa4.86□□□□□ -1.63
USF1-210ENST00000531842 TIMM17BO60830 172 aa4.86□□□□□ -1.63
USF1-210ENST00000531842 HINT1P49773 126 aaPredicted RBP4.86□□□□□ -1.63
USF1-210ENST00000531842 PCP2Q8IVA1 136 aa4.86□□□□□ -1.63
USF1-210ENST00000531842 ZNF73O43830 326 aaPredicted RBP4.85□□□□□ -1.63
USF1-210ENST00000531842 S100A1P23297 94 aa4.85□□□□□ -1.63
USF1-210ENST00000531842 ST20-AS1Q8NBB2 130 aa4.85□□□□□ -1.63
USF1-210ENST00000531842 HRCT1Q6UXD1 115 aa4.84□□□□□ -1.63
USF1-210ENST00000531842 OR13C6PQ8NH95 151 aa4.84□□□□□ -1.63
USF1-210ENST00000531842 CBY1Q9Y3M2 126 aa4.84□□□□□ -1.63
USF1-210ENST00000531842 SPANXDQ9BXN6 97 aa4.83□□□□□ -1.64
USF1-210ENST00000531842 SPANXCQ9NY87 97 aa4.83□□□□□ -1.64
USF1-210ENST00000531842 SLC25A34Q6PIV7 304 aa4.82□□□□□ -1.64
USF1-210ENST00000531842 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
USF1-210ENST00000531842 C5orf52A6NGY3 159 aa4.81□□□□□ -1.64
USF1-210ENST00000531842 SNRPEP62304 92 aaKnown RBP4.81□□□□□ -1.64
USF1-210ENST00000531842 LIMD2Q9BT23 127 aa4.81□□□□□ -1.64
USF1-210ENST00000531842 DHRS4-AS1Q9P1J3 65 aa4.81□□□□□ -1.64
USF1-210ENST00000531842 LAMTOR3Q9UHA4 124 aa4.81□□□□□ -1.64
USF1-210ENST00000531842 C20orf202A1L168 122 aa4.8□□□□□ -1.64
USF1-210ENST00000531842 MUSTN1Q8IVN3 82 aa4.8□□□□□ -1.64
USF1-210ENST00000531842 TAL2Q16559 108 aa4.79□□□□□ -1.64
USF1-210ENST00000531842 COX6B2Q6YFQ2 88 aa4.79□□□□□ -1.64
USF1-210ENST00000531842 DEFB105AQ8NG35 78 aa4.79□□□□□ -1.64
USF1-210ENST00000531842 ELOF1P60002 83 aaKnown RBP4.78□□□□□ -1.64
USF1-210ENST00000531842 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.64
USF1-210ENST00000531842 IFITM1P13164 125 aa4.77□□□□□ -1.65
USF1-210ENST00000531842 SPRR1BP22528 89 aa4.77□□□□□ -1.65
USF1-210ENST00000531842 COX7BP24311 80 aa4.77□□□□□ -1.65
USF1-210ENST00000531842 S100A2P29034 98 aa4.77□□□□□ -1.65
USF1-210ENST00000531842 Q1RN00 199 aa4.77□□□□□ -1.65
USF1-210ENST00000531842 C6orf99Q4VX62 202 aa4.77□□□□□ -1.65
USF1-210ENST00000531842 H7C2G1 150 aa4.76□□□□□ -1.65
USF1-210ENST00000531842 Q6ZVH6 145 aa4.76□□□□□ -1.65
USF1-210ENST00000531842 LINC00518Q8N0U6 118 aa4.76□□□□□ -1.65
USF1-210ENST00000531842 PRO1933Q9H354 126 aa4.76□□□□□ -1.65
USF1-210ENST00000531842 TEX49A0A1B0GTD5 131 aa4.75□□□□□ -1.65
USF1-210ENST00000531842 SMIM29Q86T20 159 aa4.75□□□□□ -1.65
USF1-210ENST00000531842 S100A6P06703 90 aa4.74□□□□□ -1.65
USF1-210ENST00000531842 AKR1D1P51857 326 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms