RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 TRGV2A0A075B6R0 118 aa2.46□□□□□ -2.02
USP47-209ENST00000530041 TRGV4A0A0C4DH28 118 aa2.46□□□□□ -2.02
USP47-209ENST00000530041 H7BZZ5 65 aa2.46□□□□□ -2.02
USP47-209ENST00000530041 PDE6GP18545 87 aa2.46□□□□□ -2.02
USP47-209ENST00000530041 KLKP1Q107X0 134 aa2.46□□□□□ -2.02
USP47-209ENST00000530041 ENHOQ6UWT2 76 aa2.46□□□□□ -2.02
USP47-209ENST00000530041 ANKRD11Q6UB99 2663 aaPredicted RBP2.46□□□□□ -2.02
USP47-209ENST00000530041 LOC400499M0QZD8 3231 aa2.46□□□□□ -2.02
USP47-209ENST00000530041 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.46□□□□□ -2.02
USP47-209ENST00000530041 SPTA1P02549 2419 aa2.45□□□□□ -2.02
USP47-209ENST00000530041 TRAV23DV6A0A075B6W5 121 aa2.45□□□□□ -2.02
USP47-209ENST00000530041 ERC2-IT1O76042 136 aa2.45□□□□□ -2.02
USP47-209ENST00000530041 RBM3P98179 157 aaKnown RBP2.45□□□□□ -2.02
USP47-209ENST00000530041 MOBPQ13875 183 aa2.45□□□□□ -2.02
USP47-209ENST00000530041 HRCT1Q6UXD1 115 aa2.45□□□□□ -2.02
USP47-209ENST00000530041 C20orf197Q8N268 126 aa2.45□□□□□ -2.02
USP47-209ENST00000530041 WFDC9Q8NEX5 89 aa2.45□□□□□ -2.02
USP47-209ENST00000530041 PRRC2CQ9Y520 2896 aaKnown RBP2.45□□□□□ -2.02
USP47-209ENST00000530041 RIF1Q5UIP0 2472 aaKnown RBP2.45□□□□□ -2.02
USP47-209ENST00000530041 AKAP6Q13023 2319 aa2.45□□□□□ -2.02
USP47-209ENST00000530041 TRAV10A0A0B4J240 114 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 IGKV3OR2-268A0A0C4DH90 116 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 TRBV7-6A0A0J9YX20 115 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 A0A1B0GW54 56 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 C16orf90A8MZG2 172 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 NDUFC1O43677 76 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 IGLV6-57P01721 117 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 ATP5EP56381 51 aaPredicted RBP2.44□□□□□ -2.02
USP47-209ENST00000530041 IGFL1Q6UW32 110 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 Q8NDZ9 215 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 C16orf95Q9H693 158 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 SPENQ96T58 3664 aaKnown RBP2.44□□□□□ -2.02
USP47-209ENST00000530041 BDP1A6H8Y1 2624 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 WDFY4Q6ZS81 3184 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 BSNQ9UPA5 3926 aa2.44□□□□□ -2.02
USP47-209ENST00000530041 CSPG4Q6UVK1 2322 aa2.43□□□□□ -2.02
USP47-209ENST00000530041 MGAQ8IWI9 3026 aa2.43□□□□□ -2.02
USP47-209ENST00000530041 HRNRQ86YZ3 2850 aaPredicted RBP2.43□□□□□ -2.02
USP47-209ENST00000530041 GVQW2A0A096LPI5 108 aaPredicted RBP2.43□□□□□ -2.02
USP47-209ENST00000530041 TRBV7-4A0A0J9YYF1 115 aa2.43□□□□□ -2.02
USP47-209ENST00000530041 M0R2N4 97 aa2.43□□□□□ -2.02
USP47-209ENST00000530041 IGLV1-51P01701 117 aa2.43□□□□□ -2.02
USP47-209ENST00000530041 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.43□□□□□ -2.02
USP47-209ENST00000530041 TTC28Q96AY4 2481 aa2.43□□□□□ -2.02
USP47-209ENST00000530041 KALRNO60229 2985 aa2.43□□□□□ -2.02
USP47-209ENST00000530041 AKAP13Q12802 2813 aa2.42□□□□□ -2.02
USP47-209ENST00000530041 PIEZO2Q9H5I5 2752 aa2.42□□□□□ -2.02
USP47-209ENST00000530041 NBASA2RRP1 2371 aa2.42□□□□□ -2.02
USP47-209ENST00000530041 FP248Q71RG6 208 aaPredicted RBP2.42□□□□□ -2.02
USP47-209ENST00000530041 PRO0255Q9UI72 69 aa2.42□□□□□ -2.02
USP47-209ENST00000530041 DMXL2Q8TDJ6 3036 aa2.42□□□□□ -2.02
USP47-209ENST00000530041 DMDP11532 3685 aa2.42□□□□□ -2.02
USP47-209ENST00000530041 CR1P17927 2039 aa2.42□□□□□ -2.02
USP47-209ENST00000530041 ADGRG4Q8IZF6 3080 aa2.42□□□□□ -2.02
USP47-209ENST00000530041 HIVEP2P31629 2446 aa2.41□□□□□ -2.02
USP47-209ENST00000530041 SMG1Q96Q15 3661 aaKnown RBP2.41□□□□□ -2.02
USP47-209ENST00000530041 F8WEM9 126 aa2.41□□□□□ -2.02
USP47-209ENST00000530041 HAMPP81172 84 aa2.41□□□□□ -2.02
USP47-209ENST00000530041 C9orf116Q5BN46 136 aaPredicted RBP2.41□□□□□ -2.02
USP47-209ENST00000530041 UNQ6190/PRO20217Q6UXQ8 127 aa2.41□□□□□ -2.02
USP47-209ENST00000530041 Q6ZQY7 126 aa2.41□□□□□ -2.02
USP47-209ENST00000530041 WFDC10AQ9H1F0 79 aa2.41□□□□□ -2.02
USP47-209ENST00000530041 LAMTOR3Q9UHA4 124 aa2.41□□□□□ -2.02
USP47-209ENST00000530041 CREBBPQ92793 2442 aa2.41□□□□□ -2.02
USP47-209ENST00000530041 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
USP47-209ENST00000530041 ZNF292O60281 2723 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 IGKV4-1P06312 121 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 MIFP14174 115 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 COX7BP24311 80 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 ELOF1P60002 83 aaKnown RBP2.4□□□□□ -2.03
USP47-209ENST00000530041 SPAG11BQ08648 103 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 DEFB113Q30KQ7 82 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 LINC00269Q8N2A0 174 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 DIRC1Q969H9 104 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 TM2D3Q9BRN9 247 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 SNURFQ9Y675 71 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 DCHS2Q6V1P9 2916 aa2.4□□□□□ -2.03
USP47-209ENST00000530041 DCHS1Q96JQ0 3298 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 ZFHX4Q86UP3 3567 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 MUC6Q6W4X9 2439 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 LCE6AA0A183 80 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 ZNF73O43830 326 aaPredicted RBP2.39□□□□□ -2.03
USP47-209ENST00000530041 ANGP03950 147 aaKnown RBP2.39□□□□□ -2.03
USP47-209ENST00000530041 DEFB130BP0DP73 79 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 DEFB130AP0DP74 79 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 NREPQ16612 68 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 FAM229BQ4G0N7 80 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 LELP1Q5T871 98 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 CLPSL2Q6UWE3 100 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 LCA10Q71F78 164 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 TMEM254Q8TBM7 123 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 XAGE1AQ9HD64 81 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 C6orf48Q9UBA6 75 aa2.39□□□□□ -2.03
USP47-209ENST00000530041 ZFHX2Q9C0A1 2572 aaPredicted RBP2.39□□□□□ -2.03
USP47-209ENST00000530041 M0R378 163 aa2.38□□□□□ -2.03
USP47-209ENST00000530041 KPRPQ5T749 579 aaPredicted RBP2.38□□□□□ -2.03
USP47-209ENST00000530041 KRTAP26-1Q6PEX3 210 aa2.38□□□□□ -2.03
USP47-209ENST00000530041 LINC00474Q9P2X8 69 aa2.38□□□□□ -2.03
USP47-209ENST00000530041 CSMD1Q96PZ7 3565 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms