RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 SVBPQ8N300 66 aa11.15□□□□□ -0.62
SF3B2-207ENST00000529577 SERF1AO75920 110 aa11.14□□□□□ -0.63
SF3B2-207ENST00000529577 C9orf153Q5TBE3 101 aa11.14□□□□□ -0.63
SF3B2-207ENST00000529577 ZNF73O43830 326 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-207ENST00000529577 PCOTHQ58A44 107 aa11.12□□□□□ -0.63
SF3B2-207ENST00000529577 LEPROTL1O95214 131 aa11.11□□□□□ -0.63
SF3B2-207ENST00000529577 TRGC2P03986 189 aa11.11□□□□□ -0.63
SF3B2-207ENST00000529577 A0A0J9YXY3 114 aa11.1□□□□□ -0.63
SF3B2-207ENST00000529577 S100A12P80511 92 aa11.1□□□□□ -0.63
SF3B2-207ENST00000529577 S100A7L2Q5SY68 101 aa11.1□□□□□ -0.63
SF3B2-207ENST00000529577 SPRR1BP22528 89 aa11.09□□□□□ -0.63
SF3B2-207ENST00000529577 PLNP26678 52 aa11.09□□□□□ -0.63
SF3B2-207ENST00000529577 LITAFQ99732 161 aa11.09□□□□□ -0.63
SF3B2-207ENST00000529577 FLGP20930 4061 aaPredicted RBP11.09□□□□□ -0.63
SF3B2-207ENST00000529577 DPM2O94777 84 aa11.08□□□□□ -0.64
SF3B2-207ENST00000529577 NMUP48645 174 aa11.08□□□□□ -0.64
SF3B2-207ENST00000529577 HRCT1Q6UXD1 115 aa11.08□□□□□ -0.64
SF3B2-207ENST00000529577 FABP4P15090 132 aa11.07□□□□□ -0.64
SF3B2-207ENST00000529577 C9orf92A6NGG3 77 aa11.06□□□□□ -0.64
SF3B2-207ENST00000529577 IGKCP01834 107 aa11.06□□□□□ -0.64
SF3B2-207ENST00000529577 LGALS3P17931 250 aaKnown RBP11.06□□□□□ -0.64
SF3B2-207ENST00000529577 LORP23490 312 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-207ENST00000529577 JOSD1Q15040 202 aaPredicted RBP11.05□□□□□ -0.64
SF3B2-207ENST00000529577 MIEN1Q9BRT3 115 aa11.05□□□□□ -0.64
SF3B2-207ENST00000529577 IGLV8-61A0A075B6I0 122 aa11.03□□□□□ -0.64
SF3B2-207ENST00000529577 C5orf52A6NGY3 159 aa11.01□□□□□ -0.65
SF3B2-207ENST00000529577 E9PLD3 99 aa11.01□□□□□ -0.65
SF3B2-207ENST00000529577 KRTAP10-6P60371 365 aaPredicted RBP11.01□□□□□ -0.65
SF3B2-207ENST00000529577 HERVK_113P61574 105 aa11.01□□□□□ -0.65
SF3B2-207ENST00000529577 LINC00308Q8TCZ7 52 aa11.01□□□□□ -0.65
SF3B2-207ENST00000529577 S100A1P23297 94 aa11□□□□□ -0.65
SF3B2-207ENST00000529577 SLC7A5P1Q8MH63 180 aa11□□□□□ -0.65
SF3B2-207ENST00000529577 HSPB8Q9UJY1 196 aa10.99□□□□□ -0.65
SF3B2-207ENST00000529577 A0A0G2JQZ4 141 aa10.97□□□□□ -0.65
SF3B2-207ENST00000529577 TTTY13Q9BZ97 58 aa10.97□□□□□ -0.65
SF3B2-207ENST00000529577 SMIM29Q86T20 159 aa10.96□□□□□ -0.65
SF3B2-207ENST00000529577 ELOF1P60002 83 aaKnown RBP10.95□□□□□ -0.66
SF3B2-207ENST00000529577 SPANXCQ9NY87 97 aa10.95□□□□□ -0.66
SF3B2-207ENST00000529577 COLCA2A8K830 154 aa10.94□□□□□ -0.66
SF3B2-207ENST00000529577 Q1RN00 199 aa10.94□□□□□ -0.66
SF3B2-207ENST00000529577 LIMD2Q9BT23 127 aa10.94□□□□□ -0.66
SF3B2-207ENST00000529577 H7C2G1 150 aa10.93□□□□□ -0.66
SF3B2-207ENST00000529577 OR13C6PQ8NH95 151 aa10.93□□□□□ -0.66
SF3B2-207ENST00000529577 DHRS4-AS1Q9P1J3 65 aa10.92□□□□□ -0.66
SF3B2-207ENST00000529577 C6orf99Q4VX62 202 aa10.91□□□□□ -0.66
SF3B2-207ENST00000529577 C1orf195Q5TG92 126 aa10.91□□□□□ -0.66
SF3B2-207ENST00000529577 LAMTOR3Q9UHA4 124 aa10.91□□□□□ -0.66
SF3B2-207ENST00000529577 TIMM17BO60830 172 aa10.9□□□□□ -0.66
SF3B2-207ENST00000529577 CFC1BP0CG36 223 aa10.9□□□□□ -0.66
SF3B2-207ENST00000529577 SYS1-DBNDD2H3BUS1 97 aa10.89□□□□□ -0.67
SF3B2-207ENST00000529577 COX7BP24311 80 aa10.89□□□□□ -0.67
SF3B2-207ENST00000529577 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-207ENST00000529577 CD164Q04900 197 aa10.89□□□□□ -0.67
SF3B2-207ENST00000529577 DEFB105AQ8NG35 78 aa10.89□□□□□ -0.67
SF3B2-207ENST00000529577 SPANXDQ9BXN6 97 aa10.89□□□□□ -0.67
SF3B2-207ENST00000529577 Q5XG85 94 aa10.87□□□□□ -0.67
SF3B2-207ENST00000529577 SLC25A34Q6PIV7 304 aa10.86□□□□□ -0.67
SF3B2-207ENST00000529577 RPL37P61927 97 aaKnown RBP10.85□□□□□ -0.67
SF3B2-207ENST00000529577 LINC01545Q5VT33 79 aa10.85□□□□□ -0.67
SF3B2-207ENST00000529577 PRO1933Q9H354 126 aa10.85□□□□□ -0.67
SF3B2-207ENST00000529577 TAL2Q16559 108 aa10.84□□□□□ -0.67
SF3B2-207ENST00000529577 IGLV5-48A0A075B6I7 105 aa10.83□□□□□ -0.68
SF3B2-207ENST00000529577 TEX49A0A1B0GTD5 131 aa10.83□□□□□ -0.68
SF3B2-207ENST00000529577 ZNF815PA8K554 130 aa10.83□□□□□ -0.68
SF3B2-207ENST00000529577 CBY1Q9Y3M2 126 aa10.83□□□□□ -0.68
SF3B2-207ENST00000529577 HIST1H2BKO60814 126 aa10.79□□□□□ -0.68
SF3B2-207ENST00000529577 HIST1H2BJP06899 126 aa10.79□□□□□ -0.68
SF3B2-207ENST00000529577 HIST1H2BOP23527 126 aa10.79□□□□□ -0.68
SF3B2-207ENST00000529577 HIST1H2BBP33778 126 aa10.79□□□□□ -0.68
SF3B2-207ENST00000529577 HIST1H2BDP58876 126 aa10.79□□□□□ -0.68
SF3B2-207ENST00000529577 HIST1H2BCP62807 126 aa10.79□□□□□ -0.68
SF3B2-207ENST00000529577 HIST2H2BEQ16778 126 aa10.79□□□□□ -0.68
SF3B2-207ENST00000529577 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.79□□□□□ -0.68
SF3B2-207ENST00000529577 HIST1H2BHQ93079 126 aa10.79□□□□□ -0.68
SF3B2-207ENST00000529577 HIST1H2BNQ99877 126 aa10.79□□□□□ -0.68
SF3B2-207ENST00000529577 HIST1H2BMQ99879 126 aa10.79□□□□□ -0.68
SF3B2-207ENST00000529577 TRBV7-6A0A0J9YX20 115 aa10.77□□□□□ -0.69
SF3B2-207ENST00000529577 AKR1D1P51857 326 aa10.77□□□□□ -0.69
SF3B2-207ENST00000529577 LINC00518Q8N0U6 118 aa10.77□□□□□ -0.69
SF3B2-207ENST00000529577 C3orf79P0CE67 100 aa10.75□□□□□ -0.69
SF3B2-207ENST00000529577 PET117Q6UWS5 81 aa10.75□□□□□ -0.69
SF3B2-207ENST00000529577 ANKRD39Q53RE8 183 aa10.74□□□□□ -0.69
SF3B2-207ENST00000529577 A0A1B0GWB2 263 aa10.73□□□□□ -0.69
SF3B2-207ENST00000529577 M0R2T5 61 aa10.73□□□□□ -0.69
SF3B2-207ENST00000529577 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
SF3B2-207ENST00000529577 SMIM11BQ8TCY0 68 aa10.68□□□□□ -0.7
SF3B2-207ENST00000529577 SSPOA2VEC9 5147 aa10.68□□□□□ -0.7
SF3B2-207ENST00000529577 A6NDN8 102 aa10.67□□□□□ -0.7
SF3B2-207ENST00000529577 COX6B2Q6YFQ2 88 aa10.67□□□□□ -0.7
SF3B2-207ENST00000529577 PCP2Q8IVA1 136 aa10.67□□□□□ -0.7
SF3B2-207ENST00000529577 USH2AO75445 5202 aa10.65□□□□□ -0.7
SF3B2-207ENST00000529577 SCGB1D4Q6XE38 83 aa10.64□□□□□ -0.71
SF3B2-207ENST00000529577 ATOH7Q8N100 152 aa10.64□□□□□ -0.71
SF3B2-207ENST00000529577 IFITM1P13164 125 aa10.63□□□□□ -0.71
SF3B2-207ENST00000529577 KRTDAPP60985 99 aa10.62□□□□□ -0.71
SF3B2-207ENST00000529577 COA6Q5JTJ3 125 aaKnown RBP10.6□□□□□ -0.71
SF3B2-207ENST00000529577 A4D1N5 150 aa10.58□□□□□ -0.72
SF3B2-207ENST00000529577 TCL1BO95988 128 aa10.58□□□□□ -0.72
SF3B2-207ENST00000529577 IGFL1Q6UW32 110 aa10.58□□□□□ -0.72
SF3B2-207ENST00000529577 KRTAP9-8Q9BYQ0 159 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms