RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 NKAPP1Q8N9T2 125 aa5.42□□□□□ -1.54
CSTF3-208ENST00000528865 MRAPQ8TCY5 172 aa5.42□□□□□ -1.54
CSTF3-208ENST00000528865 KMT2BQ9UMN6 2715 aaPredicted RBP5.42□□□□□ -1.54
CSTF3-208ENST00000528865 H7BZZ5 65 aa5.41□□□□□ -1.54
CSTF3-208ENST00000528865 ERC2-IT1O76042 136 aa5.41□□□□□ -1.54
CSTF3-208ENST00000528865 OXTP01178 125 aa5.41□□□□□ -1.54
CSTF3-208ENST00000528865 TNP2Q05952 138 aa5.41□□□□□ -1.54
CSTF3-208ENST00000528865 KRTAP7-1Q8IUC3 87 aa5.41□□□□□ -1.54
CSTF3-208ENST00000528865 RMI2Q96E14 147 aa5.41□□□□□ -1.54
CSTF3-208ENST00000528865 LINC00588Q9Y4M8 146 aa5.41□□□□□ -1.54
CSTF3-208ENST00000528865 TENM4Q6N022 2769 aa5.4□□□□□ -1.54
CSTF3-208ENST00000528865 NREPQ16612 68 aa5.4□□□□□ -1.54
CSTF3-208ENST00000528865 Q6ZRX8 168 aa5.4□□□□□ -1.54
CSTF3-208ENST00000528865 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
CSTF3-208ENST00000528865 FAM236DA0A1B0GTK5 79 aa5.39□□□□□ -1.55
CSTF3-208ENST00000528865 NDUFC1O43677 76 aa5.39□□□□□ -1.55
CSTF3-208ENST00000528865 IGKV4-1P06312 121 aa5.39□□□□□ -1.55
CSTF3-208ENST00000528865 FAM236CP0DP71 79 aa5.39□□□□□ -1.55
CSTF3-208ENST00000528865 SCXQ7RTU7 201 aa5.39□□□□□ -1.55
CSTF3-208ENST00000528865 Q9BRP9 147 aa5.39□□□□□ -1.55
CSTF3-208ENST00000528865 NBEAL2Q6ZNJ1 2754 aa5.38□□□□□ -1.55
CSTF3-208ENST00000528865 A0A1W2PNM2 257 aa5.38□□□□□ -1.55
CSTF3-208ENST00000528865 CASC10Q5T4H9 136 aa5.38□□□□□ -1.55
CSTF3-208ENST00000528865 TM2D3Q9BRN9 247 aa5.38□□□□□ -1.55
CSTF3-208ENST00000528865 HELZ2Q9BYK8 2649 aaKnown RBP5.38□□□□□ -1.55
CSTF3-208ENST00000528865 GCN1Q92616 2671 aaKnown RBP5.38□□□□□ -1.55
CSTF3-208ENST00000528865 DNAH3Q8TD57 4116 aa5.38□□□□□ -1.55
CSTF3-208ENST00000528865 NIPBLQ6KC79 2804 aaeCLIP5.37□□□□□ -1.55
CSTF3-208ENST00000528865 BPY2O14599 106 aa5.37□□□□□ -1.55
CSTF3-208ENST00000528865 DEFB105AQ8NG35 78 aa5.37□□□□□ -1.55
CSTF3-208ENST00000528865 SPRR4Q96PI1 79 aa5.37□□□□□ -1.55
CSTF3-208ENST00000528865 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
CSTF3-208ENST00000528865 CMYA5Q8N3K9 4069 aa5.37□□□□□ -1.55
CSTF3-208ENST00000528865 ETDCA0A1B0GVM5 59 aa5.36□□□□□ -1.55
CSTF3-208ENST00000528865 FAM168BA1KXE4 195 aa5.36□□□□□ -1.55
CSTF3-208ENST00000528865 FUSP35637 526 aaKnown RBP eCLIP5.36□□□□□ -1.55
CSTF3-208ENST00000528865 Q8NBF4 154 aa5.36□□□□□ -1.55
CSTF3-208ENST00000528865 OCR1Q9BZK8 76 aa5.36□□□□□ -1.55
CSTF3-208ENST00000528865 RPL37AP8A6NKH3 93 aa5.35□□□□□ -1.55
CSTF3-208ENST00000528865 Q5XG85 94 aa5.35□□□□□ -1.55
CSTF3-208ENST00000528865 MRPL55Q7Z7F7 128 aaKnown RBP5.35□□□□□ -1.55
CSTF3-208ENST00000528865 TRRAPQ9Y4A5 3859 aa5.34□□□□□ -1.55
CSTF3-208ENST00000528865 ATP5EP56381 51 aaPredicted RBP5.34□□□□□ -1.55
CSTF3-208ENST00000528865 C5orf47Q569G3 176 aa5.34□□□□□ -1.55
CSTF3-208ENST00000528865 C1orf137Q5JT78 98 aa5.34□□□□□ -1.55
CSTF3-208ENST00000528865 SMIM29Q86T20 159 aa5.34□□□□□ -1.55
CSTF3-208ENST00000528865 ST20-AS1Q8NBB2 130 aa5.34□□□□□ -1.55
CSTF3-208ENST00000528865 SNURFQ9Y675 71 aa5.34□□□□□ -1.55
CSTF3-208ENST00000528865 NSD1Q96L73 2696 aaPredicted RBP5.34□□□□□ -1.55
CSTF3-208ENST00000528865 A0A0U1RQV1 116 aa5.33□□□□□ -1.56
CSTF3-208ENST00000528865 C3orf84H3BNL1 204 aa5.33□□□□□ -1.56
CSTF3-208ENST00000528865 Q8N9L7 120 aa5.33□□□□□ -1.56
CSTF3-208ENST00000528865 HUWE1Q7Z6Z7 4374 aaKnown RBP5.33□□□□□ -1.56
CSTF3-208ENST00000528865 VWFP04275 2813 aa5.32□□□□□ -1.56
CSTF3-208ENST00000528865 LCE6AA0A183 80 aa5.32□□□□□ -1.56
CSTF3-208ENST00000528865 F8WEM9 126 aa5.32□□□□□ -1.56
CSTF3-208ENST00000528865 REG3GQ6UW15 175 aa5.32□□□□□ -1.56
CSTF3-208ENST00000528865 TMEM254Q8TBM7 123 aa5.32□□□□□ -1.56
CSTF3-208ENST00000528865 TEP1Q99973 2627 aaKnown RBP5.31□□□□□ -1.56
CSTF3-208ENST00000528865 IGLV8-61A0A075B6I0 122 aa5.31□□□□□ -1.56
CSTF3-208ENST00000528865 K7EIL1 84 aa5.31□□□□□ -1.56
CSTF3-208ENST00000528865 CNBPP62633 177 aaKnown RBP5.31□□□□□ -1.56
CSTF3-208ENST00000528865 C16orf90A8MZG2 172 aa5.3□□□□□ -1.56
CSTF3-208ENST00000528865 DSCR10P59022 87 aa5.3□□□□□ -1.56
CSTF3-208ENST00000528865 ATRQ13535 2644 aa5.3□□□□□ -1.56
CSTF3-208ENST00000528865 HIVEP1P15822 2718 aa5.29□□□□□ -1.56
CSTF3-208ENST00000528865 SMIM26A0A096LP01 95 aa5.29□□□□□ -1.56
CSTF3-208ENST00000528865 UBE2BP63146 152 aa5.29□□□□□ -1.56
CSTF3-208ENST00000528865 C4orf26Q17RF5 130 aa5.29□□□□□ -1.56
CSTF3-208ENST00000528865 OTOGQ6ZRI0 2925 aa5.28□□□□□ -1.56
CSTF3-208ENST00000528865 LINC00476Q8WZB0 136 aa5.28□□□□□ -1.56
CSTF3-208ENST00000528865 A0A096LNI7 61 aa5.27□□□□□ -1.57
CSTF3-208ENST00000528865 A0A1W2PNN7 141 aa5.27□□□□□ -1.57
CSTF3-208ENST00000528865 SPRR1BP22528 89 aa5.27□□□□□ -1.57
CSTF3-208ENST00000528865 HECTD1Q9ULT8 2610 aa5.27□□□□□ -1.57
CSTF3-208ENST00000528865 TENM1Q9UKZ4 2725 aa5.27□□□□□ -1.57
CSTF3-208ENST00000528865 H0Y9J4 135 aa5.26□□□□□ -1.57
CSTF3-208ENST00000528865 IGFL1Q6UW32 110 aa5.26□□□□□ -1.57
CSTF3-208ENST00000528865 ZCCHC13Q8WW36 166 aaKnown RBP5.26□□□□□ -1.57
CSTF3-208ENST00000528865 KRTAP1-5Q9BYS1 174 aa5.26□□□□□ -1.57
CSTF3-208ENST00000528865 PRB2P02812 416 aaPredicted RBP5.25□□□□□ -1.57
CSTF3-208ENST00000528865 C14orf177Q52M58 125 aa5.25□□□□□ -1.57
CSTF3-208ENST00000528865 APLNQ9ULZ1 77 aa5.25□□□□□ -1.57
CSTF3-208ENST00000528865 ANK2Q01484 3957 aa5.24□□□□□ -1.57
CSTF3-208ENST00000528865 HRCT1Q6UXD1 115 aa5.24□□□□□ -1.57
CSTF3-208ENST00000528865 FP248Q71RG6 208 aaPredicted RBP5.24□□□□□ -1.57
CSTF3-208ENST00000528865 HIGD2AQ9BW72 106 aa5.24□□□□□ -1.57
CSTF3-208ENST00000528865 FAM30AQ9NZY2 134 aa5.24□□□□□ -1.57
CSTF3-208ENST00000528865 F8P00451 2351 aa5.23□□□□□ -1.57
CSTF3-208ENST00000528865 K7EQZ3 153 aa5.23□□□□□ -1.57
CSTF3-208ENST00000528865 DYNC2H1Q8NCM8 4307 aaKnown RBP5.22□□□□□ -1.57
CSTF3-208ENST00000528865 HCG22E2RYF7 251 aa5.22□□□□□ -1.57
CSTF3-208ENST00000528865 PRLHP81277 87 aa5.22□□□□□ -1.57
CSTF3-208ENST00000528865 PKIGQ9Y2B9 76 aa5.22□□□□□ -1.57
CSTF3-208ENST00000528865 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.21□□□□□ -1.58
CSTF3-208ENST00000528865 IGKV2-24A0A0C4DH68 120 aa5.21□□□□□ -1.58
CSTF3-208ENST00000528865 PSCAO43653 123 aa5.21□□□□□ -1.58
CSTF3-208ENST00000528865 KRTAP11-1Q8IUC1 163 aa5.21□□□□□ -1.58
CSTF3-208ENST00000528865 C9orf163Q8N9P6 203 aa5.21□□□□□ -1.58
CSTF3-208ENST00000528865 TENM3Q9P273 2699 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms