RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ERC2-IT1O76042 136 aa8.99□□□□□ -0.97
CAPN1-213ENST00000527897 OR13C6PQ8NH95 151 aa8.99□□□□□ -0.97
CAPN1-213ENST00000527897 LINC00308Q8TCZ7 52 aa8.99□□□□□ -0.97
CAPN1-213ENST00000527897 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
CAPN1-213ENST00000527897 Q6ZRX8 168 aa8.98□□□□□ -0.97
CAPN1-213ENST00000527897 ATOH7Q8N100 152 aa8.98□□□□□ -0.97
CAPN1-213ENST00000527897 LITAFQ99732 161 aa8.98□□□□□ -0.97
CAPN1-213ENST00000527897 TIMM17BO60830 172 aa8.97□□□□□ -0.97
CAPN1-213ENST00000527897 Q9BRP9 147 aa8.97□□□□□ -0.97
CAPN1-213ENST00000527897 IGLV9-49A0A0B4J1Y8 123 aa8.96□□□□□ -0.98
CAPN1-213ENST00000527897 ZNF73O43830 326 aaPredicted RBP8.96□□□□□ -0.98
CAPN1-213ENST00000527897 Q8NBF4 154 aa8.96□□□□□ -0.98
CAPN1-213ENST00000527897 SPANXCQ9NY87 97 aa8.96□□□□□ -0.98
CAPN1-213ENST00000527897 JOSD1Q15040 202 aaPredicted RBP8.95□□□□□ -0.98
CAPN1-213ENST00000527897 SCGB1D4Q6XE38 83 aa8.95□□□□□ -0.98
CAPN1-213ENST00000527897 HINT1P49773 126 aaPredicted RBP8.94□□□□□ -0.98
CAPN1-213ENST00000527897 ANKRD39Q53RE8 183 aa8.94□□□□□ -0.98
CAPN1-213ENST00000527897 SPAG11AQ6PDA7 123 aa8.94□□□□□ -0.98
CAPN1-213ENST00000527897 MOBPQ13875 183 aa8.93□□□□□ -0.98
CAPN1-213ENST00000527897 LINC00483Q53H64 154 aa8.93□□□□□ -0.98
CAPN1-213ENST00000527897 CBY1Q9Y3M2 126 aa8.93□□□□□ -0.98
CAPN1-213ENST00000527897 IGLV7-46A0A075B6I9 117 aa8.91□□□□□ -0.98
CAPN1-213ENST00000527897 ST20-AS1Q8NBB2 130 aa8.9□□□□□ -0.98
CAPN1-213ENST00000527897 S100A2P29034 98 aa8.89□□□□□ -0.99
CAPN1-213ENST00000527897 CTAG1AP78358 180 aa8.89□□□□□ -0.99
CAPN1-213ENST00000527897 C9orf153Q5TBE3 101 aa8.89□□□□□ -0.99
CAPN1-213ENST00000527897 SPANXDQ9BXN6 97 aa8.89□□□□□ -0.99
CAPN1-213ENST00000527897 S100A1P23297 94 aa8.88□□□□□ -0.99
CAPN1-213ENST00000527897 PCP2Q8IVA1 136 aa8.88□□□□□ -0.99
CAPN1-213ENST00000527897 LINC00518Q8N0U6 118 aa8.88□□□□□ -0.99
CAPN1-213ENST00000527897 CDIP1Q9H305 208 aa8.88□□□□□ -0.99
CAPN1-213ENST00000527897 AKR1D1P51857 326 aa8.87□□□□□ -0.99
CAPN1-213ENST00000527897 SPINK1P00995 79 aa8.86□□□□□ -0.99
CAPN1-213ENST00000527897 HIST3H2BBQ8N257 126 aa8.86□□□□□ -0.99
CAPN1-213ENST00000527897 COPS9Q8WXC6 57 aa8.86□□□□□ -0.99
CAPN1-213ENST00000527897 C6orf99Q4VX62 202 aa8.85□□□□□ -0.99
CAPN1-213ENST00000527897 SSBP3-AS1Q7Z2R9 100 aa8.85□□□□□ -0.99
CAPN1-213ENST00000527897 HIST1H2BLQ99880 126 aa8.85□□□□□ -0.99
CAPN1-213ENST00000527897 A6NDN8 102 aa8.84□□□□□ -0.99
CAPN1-213ENST00000527897 S100A6P06703 90 aa8.84□□□□□ -0.99
CAPN1-213ENST00000527897 COX7BP24311 80 aa8.84□□□□□ -0.99
CAPN1-213ENST00000527897 TPRXLQ17RH7 258 aa8.84□□□□□ -0.99
CAPN1-213ENST00000527897 MUSTN1Q8IVN3 82 aa8.84□□□□□ -0.99
CAPN1-213ENST00000527897 DHRS4-AS1Q9P1J3 65 aa8.84□□□□□ -0.99
CAPN1-213ENST00000527897 MUC2Q02817 5179 aa8.84□□□□□ -0.99
CAPN1-213ENST00000527897 IFITM1P13164 125 aa8.83□□□□□ -1
CAPN1-213ENST00000527897 HSBP1L1C9JCN9 74 aa8.81□□□□□ -1
CAPN1-213ENST00000527897 ELOF1P60002 83 aaKnown RBP8.81□□□□□ -1
CAPN1-213ENST00000527897 SNRPEP62304 92 aaKnown RBP8.81□□□□□ -1
CAPN1-213ENST00000527897 Q6ZVH6 145 aa8.81□□□□□ -1
CAPN1-213ENST00000527897 FP248Q71RG6 208 aaPredicted RBP8.81□□□□□ -1
CAPN1-213ENST00000527897 C5orf52A6NGY3 159 aa8.8□□□□□ -1
CAPN1-213ENST00000527897 DEFB105AQ8NG35 78 aa8.8□□□□□ -1
CAPN1-213ENST00000527897 TAL2Q16559 108 aa8.79□□□□□ -1
CAPN1-213ENST00000527897 SLC25A34Q6PIV7 304 aa8.78□□□□□ -1
CAPN1-213ENST00000527897 HRCT1Q6UXD1 115 aa8.77□□□□□ -1.01
CAPN1-213ENST00000527897 Q8N377 158 aa8.77□□□□□ -1.01
CAPN1-213ENST00000527897 LAMTOR3Q9UHA4 124 aa8.77□□□□□ -1.01
CAPN1-213ENST00000527897 TRAV13-2A0A0B4J235 113 aa8.76□□□□□ -1.01
CAPN1-213ENST00000527897 Q1RN00 199 aa8.76□□□□□ -1.01
CAPN1-213ENST00000527897 A0A1B0GWB2 263 aa8.75□□□□□ -1.01
CAPN1-213ENST00000527897 SLC25A20O43772 301 aa8.75□□□□□ -1.01
CAPN1-213ENST00000527897 SCGB1D1O95968 90 aa8.75□□□□□ -1.01
CAPN1-213ENST00000527897 SPRR1BP22528 89 aa8.75□□□□□ -1.01
CAPN1-213ENST00000527897 RPS29P62273 56 aaKnown RBP8.75□□□□□ -1.01
CAPN1-213ENST00000527897 TRBV7-6A0A0J9YX20 115 aa8.74□□□□□ -1.01
CAPN1-213ENST00000527897 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
CAPN1-213ENST00000527897 SMIM11BQ8TCY0 68 aa8.73□□□□□ -1.01
CAPN1-213ENST00000527897 TEX49A0A1B0GTD5 131 aa8.72□□□□□ -1.01
CAPN1-213ENST00000527897 KRTAP13-3Q3SY46 172 aa8.72□□□□□ -1.01
CAPN1-213ENST00000527897 MUC17Q685J3 4493 aa8.72□□□□□ -1.01
CAPN1-213ENST00000527897 A4D1N5 150 aa8.7□□□□□ -1.02
CAPN1-213ENST00000527897 HIST1H4GQ99525 98 aa8.68□□□□□ -1.02
CAPN1-213ENST00000527897 C12orf57Q99622 126 aa8.68□□□□□ -1.02
CAPN1-213ENST00000527897 LIMD2Q9BT23 127 aa8.68□□□□□ -1.02
CAPN1-213ENST00000527897 NHP2Q9NX24 153 aaKnown RBP8.68□□□□□ -1.02
CAPN1-213ENST00000527897 VAMP3Q15836 100 aa8.67□□□□□ -1.02
CAPN1-213ENST00000527897 PRO1933Q9H354 126 aa8.67□□□□□ -1.02
CAPN1-213ENST00000527897 H7C2G1 150 aa8.66□□□□□ -1.02
CAPN1-213ENST00000527897 LINC01547P58512 204 aaPredicted RBP8.66□□□□□ -1.02
CAPN1-213ENST00000527897 IGLV5-48A0A075B6I7 105 aa8.65□□□□□ -1.02
CAPN1-213ENST00000527897 SMIM29Q86T20 159 aa8.65□□□□□ -1.02
CAPN1-213ENST00000527897 A0A0G2JQZ4 141 aa8.64□□□□□ -1.03
CAPN1-213ENST00000527897 COX8AP10176 69 aa8.64□□□□□ -1.03
CAPN1-213ENST00000527897 C14orf144Q96I85 54 aa8.62□□□□□ -1.03
CAPN1-213ENST00000527897 PAM16Q9Y3D7 125 aa8.62□□□□□ -1.03
CAPN1-213ENST00000527897 LINC00575Q6W349 94 aa8.61□□□□□ -1.03
CAPN1-213ENST00000527897 FAT4Q6V0I7 4981 aa8.61□□□□□ -1.03
CAPN1-213ENST00000527897 hADV29S1A0JD25 119 aa8.6□□□□□ -1.03
CAPN1-213ENST00000527897 SEC61BP60468 96 aaKnown RBP8.6□□□□□ -1.03
CAPN1-213ENST00000527897 CD164Q04900 197 aa8.6□□□□□ -1.03
CAPN1-213ENST00000527897 SPATA45Q537H7 98 aa8.6□□□□□ -1.03
CAPN1-213ENST00000527897 F8WEM9 126 aa8.59□□□□□ -1.03
CAPN1-213ENST00000527897 ASB16-AS1Q495Z4 193 aa8.59□□□□□ -1.03
CAPN1-213ENST00000527897 Q6ZQY7 126 aa8.59□□□□□ -1.03
CAPN1-213ENST00000527897 C9orf92A6NGG3 77 aa8.58□□□□□ -1.04
CAPN1-213ENST00000527897 DLEU1O43261 78 aa8.58□□□□□ -1.04
CAPN1-213ENST00000527897 VAMP8Q9BV40 100 aa8.58□□□□□ -1.04
CAPN1-213ENST00000527897 XP32Q5T750 250 aa8.57□□□□□ -1.04
CAPN1-213ENST00000527897 BVES-AS1Q5T3Y7 98 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 471.4 ms