RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 PET117Q6UWS5 81 aa11.07□□□□□ -0.64
CAPN1-211ENST00000527739 IGLV9-49A0A0B4J1Y8 123 aa11.06□□□□□ -0.64
CAPN1-211ENST00000527739 KRTAP9-2Q9BYQ4 174 aa11.06□□□□□ -0.64
CAPN1-211ENST00000527739 CDIP1Q9H305 208 aa11.06□□□□□ -0.64
CAPN1-211ENST00000527739 FAT4Q6V0I7 4981 aa11.05□□□□□ -0.64
CAPN1-211ENST00000527739 LINC01545Q5VT33 79 aa11.05□□□□□ -0.64
CAPN1-211ENST00000527739 Q6ZRX8 168 aa11.05□□□□□ -0.64
CAPN1-211ENST00000527739 Q9BRP9 147 aa11.05□□□□□ -0.64
CAPN1-211ENST00000527739 JOSD1Q15040 202 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-211ENST00000527739 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
CAPN1-211ENST00000527739 ZNF815PA8K554 130 aa11.03□□□□□ -0.64
CAPN1-211ENST00000527739 ZNF73O43830 326 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-211ENST00000527739 KRTDAPP60985 99 aa11.03□□□□□ -0.64
CAPN1-211ENST00000527739 LINC00483Q53H64 154 aa11.03□□□□□ -0.64
CAPN1-211ENST00000527739 C3orf79P0CE67 100 aa11.02□□□□□ -0.65
CAPN1-211ENST00000527739 HINT1P49773 126 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-211ENST00000527739 MOBPQ13875 183 aa11.02□□□□□ -0.65
CAPN1-211ENST00000527739 LINC00308Q8TCZ7 52 aa11.02□□□□□ -0.65
CAPN1-211ENST00000527739 TTTY13Q9BZ97 58 aa11.01□□□□□ -0.65
CAPN1-211ENST00000527739 TPRXLQ17RH7 258 aa11□□□□□ -0.65
CAPN1-211ENST00000527739 LITAFQ99732 161 aa11□□□□□ -0.65
CAPN1-211ENST00000527739 SPANXCQ9NY87 97 aa11□□□□□ -0.65
CAPN1-211ENST00000527739 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
CAPN1-211ENST00000527739 TIMM17BO60830 172 aa10.99□□□□□ -0.65
CAPN1-211ENST00000527739 MUC17Q685J3 4493 aa10.99□□□□□ -0.65
CAPN1-211ENST00000527739 A0A0U1RQV1 116 aa10.98□□□□□ -0.65
CAPN1-211ENST00000527739 SPINK1P00995 79 aa10.98□□□□□ -0.65
CAPN1-211ENST00000527739 LCE2AQ5TA79 106 aaPredicted RBP10.97□□□□□ -0.65
CAPN1-211ENST00000527739 SSBP3-AS1Q7Z2R9 100 aa10.97□□□□□ -0.65
CAPN1-211ENST00000527739 C20orf202A1L168 122 aa10.96□□□□□ -0.65
CAPN1-211ENST00000527739 C9orf153Q5TBE3 101 aa10.96□□□□□ -0.65
CAPN1-211ENST00000527739 ST20-AS1Q8NBB2 130 aa10.96□□□□□ -0.65
CAPN1-211ENST00000527739 COA6Q5JTJ3 125 aaKnown RBP10.95□□□□□ -0.66
CAPN1-211ENST00000527739 SCGB1D4Q6XE38 83 aa10.95□□□□□ -0.66
CAPN1-211ENST00000527739 FP248Q71RG6 208 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-211ENST00000527739 LINC00518Q8N0U6 118 aa10.92□□□□□ -0.66
CAPN1-211ENST00000527739 ATOH7Q8N100 152 aa10.92□□□□□ -0.66
CAPN1-211ENST00000527739 SPANXDQ9BXN6 97 aa10.92□□□□□ -0.66
CAPN1-211ENST00000527739 ANKRD39Q53RE8 183 aa10.89□□□□□ -0.67
CAPN1-211ENST00000527739 DHRS4-AS1Q9P1J3 65 aa10.89□□□□□ -0.67
CAPN1-211ENST00000527739 COX7BP24311 80 aa10.88□□□□□ -0.67
CAPN1-211ENST00000527739 C5orf52A6NGY3 159 aa10.87□□□□□ -0.67
CAPN1-211ENST00000527739 C6orf99Q4VX62 202 aa10.87□□□□□ -0.67
CAPN1-211ENST00000527739 COPS9Q8WXC6 57 aa10.86□□□□□ -0.67
CAPN1-211ENST00000527739 SLC25A20O43772 301 aa10.85□□□□□ -0.67
CAPN1-211ENST00000527739 RPS29P62273 56 aaKnown RBP10.85□□□□□ -0.67
CAPN1-211ENST00000527739 Q8N377 158 aa10.85□□□□□ -0.67
CAPN1-211ENST00000527739 A6NDN8 102 aa10.84□□□□□ -0.67
CAPN1-211ENST00000527739 KRTAP13-3Q3SY46 172 aa10.84□□□□□ -0.67
CAPN1-211ENST00000527739 SLC25A34Q6PIV7 304 aa10.84□□□□□ -0.67
CAPN1-211ENST00000527739 DEFB105AQ8NG35 78 aa10.84□□□□□ -0.67
CAPN1-211ENST00000527739 IFITM1P13164 125 aa10.83□□□□□ -0.68
CAPN1-211ENST00000527739 AKR1D1P51857 326 aa10.83□□□□□ -0.68
CAPN1-211ENST00000527739 ELOF1P60002 83 aaKnown RBP10.83□□□□□ -0.68
CAPN1-211ENST00000527739 TAL2Q16559 108 aa10.83□□□□□ -0.68
CAPN1-211ENST00000527739 PCP2Q8IVA1 136 aa10.83□□□□□ -0.68
CAPN1-211ENST00000527739 MUSTN1Q8IVN3 82 aa10.83□□□□□ -0.68
CAPN1-211ENST00000527739 LAMTOR3Q9UHA4 124 aa10.83□□□□□ -0.68
CAPN1-211ENST00000527739 HRCT1Q6UXD1 115 aa10.82□□□□□ -0.68
CAPN1-211ENST00000527739 KRTAP9-6A0A140TA67 174 aa10.8□□□□□ -0.68
CAPN1-211ENST00000527739 SPRR1BP22528 89 aa10.8□□□□□ -0.68
CAPN1-211ENST00000527739 Q6ZVH6 145 aa10.8□□□□□ -0.68
CAPN1-211ENST00000527739 S100A2P29034 98 aa10.79□□□□□ -0.68
CAPN1-211ENST00000527739 Q1RN00 199 aa10.78□□□□□ -0.68
CAPN1-211ENST00000527739 SNRPEP62304 92 aaKnown RBP10.76□□□□□ -0.69
CAPN1-211ENST00000527739 TRBV7-6A0A0J9YX20 115 aa10.75□□□□□ -0.69
CAPN1-211ENST00000527739 TEX49A0A1B0GTD5 131 aa10.75□□□□□ -0.69
CAPN1-211ENST00000527739 A0A1B0GWB2 263 aa10.75□□□□□ -0.69
CAPN1-211ENST00000527739 HIST3H2BBQ8N257 126 aa10.75□□□□□ -0.69
CAPN1-211ENST00000527739 HSBP1L1C9JCN9 74 aa10.74□□□□□ -0.69
CAPN1-211ENST00000527739 HIST1H2BLQ99880 126 aa10.74□□□□□ -0.69
CAPN1-211ENST00000527739 TRAV13-2A0A0B4J235 113 aa10.73□□□□□ -0.69
CAPN1-211ENST00000527739 LIMD2Q9BT23 127 aa10.73□□□□□ -0.69
CAPN1-211ENST00000527739 LOC105371267A0A1B0GV96 52 aa10.71□□□□□ -0.69
CAPN1-211ENST00000527739 S100A6P06703 90 aa10.71□□□□□ -0.69
CAPN1-211ENST00000527739 SEC61BP60468 96 aaKnown RBP10.71□□□□□ -0.69
CAPN1-211ENST00000527739 ASB16-AS1Q495Z4 193 aa10.71□□□□□ -0.69
CAPN1-211ENST00000527739 PRO1933Q9H354 126 aa10.71□□□□□ -0.69
CAPN1-211ENST00000527739 SMIM11BQ8TCY0 68 aa10.69□□□□□ -0.7
CAPN1-211ENST00000527739 A4D1N5 150 aa10.68□□□□□ -0.7
CAPN1-211ENST00000527739 H7C2G1 150 aa10.67□□□□□ -0.7
CAPN1-211ENST00000527739 NHP2Q9NX24 153 aaKnown RBP10.67□□□□□ -0.7
CAPN1-211ENST00000527739 VAMP3Q15836 100 aa10.65□□□□□ -0.7
CAPN1-211ENST00000527739 SMIM29Q86T20 159 aa10.65□□□□□ -0.7
CAPN1-211ENST00000527739 SCGB1D1O95968 90 aa10.64□□□□□ -0.71
CAPN1-211ENST00000527739 LINC01547P58512 204 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-211ENST00000527739 XP32Q5T750 250 aa10.64□□□□□ -0.71
CAPN1-211ENST00000527739 IGLV5-48A0A075B6I7 105 aa10.63□□□□□ -0.71
CAPN1-211ENST00000527739 A0A0G2JQZ4 141 aa10.63□□□□□ -0.71
CAPN1-211ENST00000527739 CD164Q04900 197 aa10.63□□□□□ -0.71
CAPN1-211ENST00000527739 TMA7Q9Y2S6 64 aaKnown RBP10.63□□□□□ -0.71
CAPN1-211ENST00000527739 C9orf92A6NGG3 77 aa10.62□□□□□ -0.71
CAPN1-211ENST00000527739 KRTAP4-1Q9BYQ7 146 aa10.6□□□□□ -0.71
CAPN1-211ENST00000527739 HIST1H4GQ99525 98 aa10.58□□□□□ -0.72
CAPN1-211ENST00000527739 C12orf57Q99622 126 aa10.58□□□□□ -0.72
CAPN1-211ENST00000527739 F8WEM9 126 aa10.57□□□□□ -0.72
CAPN1-211ENST00000527739 LINC00575Q6W349 94 aa10.57□□□□□ -0.72
CAPN1-211ENST00000527739 hADV29S1A0JD25 119 aa10.55□□□□□ -0.72
CAPN1-211ENST00000527739 Q6ZQY7 126 aa10.54□□□□□ -0.72
CAPN1-211ENST00000527739 COX8AP10176 69 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms