RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 ANKRD17O75179 2603 aaKnown RBP4.89□□□□□ -1.63
CTNND1-216ENST00000527467 A0A096LNT2 108 aa4.89□□□□□ -1.63
CTNND1-216ENST00000527467 KRTAP1-1Q07627 177 aa4.89□□□□□ -1.63
CTNND1-216ENST00000527467 KIAA1549Q9HCM3 1950 aa4.89□□□□□ -1.63
CTNND1-216ENST00000527467 PHF5AQ7RTV0 110 aaKnown RBP4.89□□□□□ -1.63
CTNND1-216ENST00000527467 CHTF8P0CG12 524 aa4.88□□□□□ -1.63
CTNND1-216ENST00000527467 ZNF575Q86XF7 245 aa4.88□□□□□ -1.63
CTNND1-216ENST00000527467 TNRC18O15417 2968 aaPredicted RBP4.88□□□□□ -1.63
CTNND1-216ENST00000527467 A0A1B0GVX0 72 aa4.87□□□□□ -1.63
CTNND1-216ENST00000527467 DSCR10P59022 87 aa4.87□□□□□ -1.63
CTNND1-216ENST00000527467 SRCAPQ6ZRS2 3230 aa4.87□□□□□ -1.63
CTNND1-216ENST00000527467 POLQO75417 2590 aa4.87□□□□□ -1.63
CTNND1-216ENST00000527467 IGLV5-37A0A075B6J1 123 aa4.87□□□□□ -1.63
CTNND1-216ENST00000527467 USP24Q9UPU5 2620 aa4.87□□□□□ -1.63
CTNND1-216ENST00000527467 HTTP42858 3142 aa4.86□□□□□ -1.63
CTNND1-216ENST00000527467 USP9XQ93008 2570 aaPredicted RBP4.86□□□□□ -1.63
CTNND1-216ENST00000527467 C9orf163Q8N9P6 203 aa4.85□□□□□ -1.63
CTNND1-216ENST00000527467 LCE6AA0A183 80 aa4.85□□□□□ -1.63
CTNND1-216ENST00000527467 LINC00588Q9Y4M8 146 aa4.84□□□□□ -1.63
CTNND1-216ENST00000527467 PCNX3Q9H6A9 2034 aa4.84□□□□□ -1.63
CTNND1-216ENST00000527467 KRTAP16-1A8MUX0 517 aa4.84□□□□□ -1.63
CTNND1-216ENST00000527467 SPINK7P58062 85 aa4.84□□□□□ -1.63
CTNND1-216ENST00000527467 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
CTNND1-216ENST00000527467 Q75L30 129 aa4.84□□□□□ -1.64
CTNND1-216ENST00000527467 CASC10Q5T4H9 136 aa4.83□□□□□ -1.64
CTNND1-216ENST00000527467 A0A1B0GU33 70 aa4.83□□□□□ -1.64
CTNND1-216ENST00000527467 IGFL1Q6UW32 110 aa4.83□□□□□ -1.64
CTNND1-216ENST00000527467 OBSCN-AS1Q96MR7 158 aa4.83□□□□□ -1.64
CTNND1-216ENST00000527467 GVQW2A0A096LPI5 108 aaPredicted RBP4.82□□□□□ -1.64
CTNND1-216ENST00000527467 TLX1NBP0CAT3 122 aa4.82□□□□□ -1.64
CTNND1-216ENST00000527467 PCSK5Q92824 1860 aa4.82□□□□□ -1.64
CTNND1-216ENST00000527467 RTL8CO15255 209 aa4.81□□□□□ -1.64
CTNND1-216ENST00000527467 LINC00315P59091 139 aa4.81□□□□□ -1.64
CTNND1-216ENST00000527467 FN1P02751 2386 aaKnown RBP4.81□□□□□ -1.64
CTNND1-216ENST00000527467 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
CTNND1-216ENST00000527467 PRR26Q8N8Z3 221 aa4.81□□□□□ -1.64
CTNND1-216ENST00000527467 H3BNG1 76 aa4.8□□□□□ -1.64
CTNND1-216ENST00000527467 Q8N1X5 172 aa4.8□□□□□ -1.64
CTNND1-216ENST00000527467 USP9YO00507 2555 aaPredicted RBP4.8□□□□□ -1.64
CTNND1-216ENST00000527467 LINC00528Q8N1L1 170 aa4.79□□□□□ -1.64
CTNND1-216ENST00000527467 LITAFQ99732 161 aa4.79□□□□□ -1.64
CTNND1-216ENST00000527467 KCNQ1DNQ9H478 68 aa4.79□□□□□ -1.64
CTNND1-216ENST00000527467 NBDYA0A0U1RRE5 68 aa4.78□□□□□ -1.64
CTNND1-216ENST00000527467 LINC00304Q8N9R0 145 aa4.78□□□□□ -1.64
CTNND1-216ENST00000527467 IGLV1-50A0A075B6I6 118 aa4.78□□□□□ -1.64
CTNND1-216ENST00000527467 C19orf73Q9NVV2 129 aa4.78□□□□□ -1.64
CTNND1-216ENST00000527467 RAI1Q7Z5J4 1906 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-216ENST00000527467 C9orf92A6NGG3 77 aa4.77□□□□□ -1.65
CTNND1-216ENST00000527467 C15orf56Q8N910 161 aa4.77□□□□□ -1.65
CTNND1-216ENST00000527467 CEP350Q5VT06 3117 aa4.76□□□□□ -1.65
CTNND1-216ENST00000527467 KRTAP10-11P60412 298 aa4.76□□□□□ -1.65
CTNND1-216ENST00000527467 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
CTNND1-216ENST00000527467 IGLV7-43P04211 117 aa4.75□□□□□ -1.65
CTNND1-216ENST00000527467 EXPH5Q8NEV8 1989 aa4.75□□□□□ -1.65
CTNND1-216ENST00000527467 Q8N377 158 aa4.74□□□□□ -1.65
CTNND1-216ENST00000527467 IGLV7-46A0A075B6I9 117 aa4.74□□□□□ -1.65
CTNND1-216ENST00000527467 FAM168BA1KXE4 195 aa4.73□□□□□ -1.65
CTNND1-216ENST00000527467 TLN2Q9Y4G6 2542 aa4.72□□□□□ -1.65
CTNND1-216ENST00000527467 Q8N9P0 234 aaPredicted RBP4.72□□□□□ -1.65
CTNND1-216ENST00000527467 ACANP16112 2415 aa4.72□□□□□ -1.65
CTNND1-216ENST00000527467 ZNF861PO60384 105 aa4.72□□□□□ -1.65
CTNND1-216ENST00000527467 Q5XG85 94 aa4.71□□□□□ -1.66
CTNND1-216ENST00000527467 OCR1Q9BZK8 76 aa4.71□□□□□ -1.66
CTNND1-216ENST00000527467 TRANK1O15050 2925 aa4.7□□□□□ -1.66
CTNND1-216ENST00000527467 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
CTNND1-216ENST00000527467 HRES1P13985 223 aa4.69□□□□□ -1.66
CTNND1-216ENST00000527467 COL27A1Q8IZC6 1860 aaPredicted RBP4.68□□□□□ -1.66
CTNND1-216ENST00000527467 A0A1W2PNM2 257 aa4.68□□□□□ -1.66
CTNND1-216ENST00000527467 ROMO1P60602 79 aa4.68□□□□□ -1.66
CTNND1-216ENST00000527467 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
CTNND1-216ENST00000527467 A0A1W2PNN7 141 aa4.68□□□□□ -1.66
CTNND1-216ENST00000527467 H1FX-AS1Q4G0G2 97 aa4.68□□□□□ -1.66
CTNND1-216ENST00000527467 DNAH10OSP0CZ25 163 aa4.67□□□□□ -1.66
CTNND1-216ENST00000527467 Q5VV11 94 aa4.67□□□□□ -1.66
CTNND1-216ENST00000527467 CHD9Q3L8U1 2897 aa4.67□□□□□ -1.66
CTNND1-216ENST00000527467 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.67□□□□□ -1.66
CTNND1-216ENST00000527467 GCN1Q92616 2671 aaKnown RBP4.66□□□□□ -1.66
CTNND1-216ENST00000527467 ASB16-AS1Q495Z4 193 aa4.66□□□□□ -1.66
CTNND1-216ENST00000527467 FP248Q71RG6 208 aaPredicted RBP4.66□□□□□ -1.66
CTNND1-216ENST00000527467 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
CTNND1-216ENST00000527467 ZNF292O60281 2723 aa4.65□□□□□ -1.67
CTNND1-216ENST00000527467 SETXQ7Z333 2677 aaKnown RBP4.64□□□□□ -1.67
CTNND1-216ENST00000527467 PSORS1C2Q9UIG4 136 aa4.64□□□□□ -1.67
CTNND1-216ENST00000527467 EIF4EBP3O60516 100 aaPredicted RBP4.64□□□□□ -1.67
CTNND1-216ENST00000527467 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
CTNND1-216ENST00000527467 FAM229BQ4G0N7 80 aa4.64□□□□□ -1.67
CTNND1-216ENST00000527467 Q6ZSA8 131 aa4.64□□□□□ -1.67
CTNND1-216ENST00000527467 CFAP46Q8IYW2 2715 aa4.63□□□□□ -1.67
CTNND1-216ENST00000527467 TNP2Q05952 138 aa4.63□□□□□ -1.67
CTNND1-216ENST00000527467 SPRR4Q96PI1 79 aa4.63□□□□□ -1.67
CTNND1-216ENST00000527467 Q8NAQ8 132 aa4.62□□□□□ -1.67
CTNND1-216ENST00000527467 BRCA2P51587 3418 aa4.61□□□□□ -1.67
CTNND1-216ENST00000527467 PRR34Q9NV39 138 aa4.61□□□□□ -1.67
CTNND1-216ENST00000527467 ANAPC11Q9NYG5 84 aa4.61□□□□□ -1.67
CTNND1-216ENST00000527467 R4GN34 69 aa4.61□□□□□ -1.67
CTNND1-216ENST00000527467 PCNTO95613 3336 aa4.61□□□□□ -1.67
CTNND1-216ENST00000527467 CHD6Q8TD26 2715 aa4.6□□□□□ -1.67
CTNND1-216ENST00000527467 MAST4O15021 2626 aa4.6□□□□□ -1.67
CTNND1-216ENST00000527467 DNAH12Q6ZR08 3092 aa4.59□□□□□ -1.67
CTNND1-216ENST00000527467 UNC79Q9P2D8 2635 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms