RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 C14orf177Q52M58 125 aa10.53□□□□□ -0.72
SNRNP35-204ENST00000527158 CSMD3Q7Z407 3707 aa10.53□□□□□ -0.72
SNRNP35-204ENST00000527158 TRAV23DV6A0A075B6W5 121 aa10.52□□□□□ -0.73
SNRNP35-204ENST00000527158 LOC110117498A0A087WWA1 95 aa10.52□□□□□ -0.73
SNRNP35-204ENST00000527158 UBL5Q9BZL1 73 aa10.52□□□□□ -0.73
SNRNP35-204ENST00000527158 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
SNRNP35-204ENST00000527158 DNAH1Q9P2D7 4330 aa10.51□□□□□ -0.73
SNRNP35-204ENST00000527158 RBM3P98179 157 aaKnown RBP10.5□□□□□ -0.73
SNRNP35-204ENST00000527158 SERP2Q8N6R1 65 aa10.5□□□□□ -0.73
SNRNP35-204ENST00000527158 NKAPP1Q8N9T2 125 aa10.5□□□□□ -0.73
SNRNP35-204ENST00000527158 LYSTQ99698 3801 aa10.5□□□□□ -0.73
SNRNP35-204ENST00000527158 TRBV7-6A0A0J9YX20 115 aa10.49□□□□□ -0.73
SNRNP35-204ENST00000527158 CNBPP62633 177 aaKnown RBP10.49□□□□□ -0.73
SNRNP35-204ENST00000527158 PLA2G2DQ9UNK4 145 aa10.49□□□□□ -0.73
SNRNP35-204ENST00000527158 SMIM20Q8N5G0 67 aa10.48□□□□□ -0.73
SNRNP35-204ENST00000527158 DIRC1Q969H9 104 aa10.48□□□□□ -0.73
SNRNP35-204ENST00000527158 ZNF73O43830 326 aaPredicted RBP10.48□□□□□ -0.73
SNRNP35-204ENST00000527158 M0R2N4 97 aa10.46□□□□□ -0.73
SNRNP35-204ENST00000527158 SERTAD4-AS1Q5TG53 156 aa10.46□□□□□ -0.73
SNRNP35-204ENST00000527158 Q6ZQT0 140 aa10.46□□□□□ -0.73
SNRNP35-204ENST00000527158 TENM2Q9NT68 2774 aa10.46□□□□□ -0.73
SNRNP35-204ENST00000527158 LAMTOR3Q9UHA4 124 aa10.46□□□□□ -0.74
SNRNP35-204ENST00000527158 BCE1O60756 84 aa10.45□□□□□ -0.74
SNRNP35-204ENST00000527158 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.45□□□□□ -0.74
SNRNP35-204ENST00000527158 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.45□□□□□ -0.74
SNRNP35-204ENST00000527158 DSCR8Q96T75 97 aa10.45□□□□□ -0.74
SNRNP35-204ENST00000527158 DNAH7Q8WXX0 4024 aa10.45□□□□□ -0.74
SNRNP35-204ENST00000527158 Q6ZRN7 208 aaPredicted RBP10.44□□□□□ -0.74
SNRNP35-204ENST00000527158 LRCOL1A6NCL2 159 aa10.43□□□□□ -0.74
SNRNP35-204ENST00000527158 PLECQ15149 4684 aaKnown RBP10.43□□□□□ -0.74
SNRNP35-204ENST00000527158 IGLV5-37A0A075B6J1 123 aa10.43□□□□□ -0.74
SNRNP35-204ENST00000527158 COX7BP24311 80 aa10.43□□□□□ -0.74
SNRNP35-204ENST00000527158 C7orf33Q8WU49 177 aa10.43□□□□□ -0.74
SNRNP35-204ENST00000527158 FAM168BA1KXE4 195 aa10.42□□□□□ -0.74
SNRNP35-204ENST00000527158 A0A087WVE0 104 aa10.42□□□□□ -0.74
SNRNP35-204ENST00000527158 C16orf90A8MZG2 172 aa10.41□□□□□ -0.74
SNRNP35-204ENST00000527158 Q6ZQY7 126 aa10.41□□□□□ -0.74
SNRNP35-204ENST00000527158 WWC2-AS2Q96NR7 200 aa10.41□□□□□ -0.74
SNRNP35-204ENST00000527158 FBN3Q75N90 2809 aa10.41□□□□□ -0.74
SNRNP35-204ENST00000527158 TMEM258P61165 79 aa10.41□□□□□ -0.74
SNRNP35-204ENST00000527158 KCNQ1DNQ9H478 68 aa10.41□□□□□ -0.74
SNRNP35-204ENST00000527158 STARD9Q9P2P6 4700 aa10.4□□□□□ -0.74
SNRNP35-204ENST00000527158 ELOF1P60002 83 aaKnown RBP10.4□□□□□ -0.74
SNRNP35-204ENST00000527158 FAM19A5Q7Z5A7 132 aaPredicted RBP10.39□□□□□ -0.75
SNRNP35-204ENST00000527158 RPS28P62857 69 aaKnown RBP10.39□□□□□ -0.75
SNRNP35-204ENST00000527158 PKIGQ9Y2B9 76 aa10.39□□□□□ -0.75
SNRNP35-204ENST00000527158 A0A096LNI7 61 aa10.38□□□□□ -0.75
SNRNP35-204ENST00000527158 Q6ZR54 194 aa10.38□□□□□ -0.75
SNRNP35-204ENST00000527158 IGKV2-24A0A0C4DH68 120 aa10.38□□□□□ -0.75
SNRNP35-204ENST00000527158 MRPL55Q7Z7F7 128 aaKnown RBP10.38□□□□□ -0.75
SNRNP35-204ENST00000527158 J3KT08 172 aa10.37□□□□□ -0.75
SNRNP35-204ENST00000527158 CXCL6P80162 114 aa10.37□□□□□ -0.75
SNRNP35-204ENST00000527158 C9orf163Q8N9P6 203 aa10.37□□□□□ -0.75
SNRNP35-204ENST00000527158 IGLV1-50A0A075B6I6 118 aa10.36□□□□□ -0.75
SNRNP35-204ENST00000527158 LY6G6CO95867 125 aa10.36□□□□□ -0.75
SNRNP35-204ENST00000527158 KRTAP7-1Q8IUC3 87 aa10.36□□□□□ -0.75
SNRNP35-204ENST00000527158 RPL37AP8A6NKH3 93 aa10.36□□□□□ -0.75
SNRNP35-204ENST00000527158 TRBV7-4A0A0J9YYF1 115 aa10.35□□□□□ -0.75
SNRNP35-204ENST00000527158 PRYO14603 147 aa10.35□□□□□ -0.75
SNRNP35-204ENST00000527158 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
SNRNP35-204ENST00000527158 Q6ZVQ6 151 aa10.33□□□□□ -0.76
SNRNP35-204ENST00000527158 FAM19A1Q7Z5A9 133 aa10.33□□□□□ -0.76
SNRNP35-204ENST00000527158 A0A087WTM6 91 aa10.33□□□□□ -0.76
SNRNP35-204ENST00000527158 LINC01547P58512 204 aaPredicted RBP10.33□□□□□ -0.76
SNRNP35-204ENST00000527158 DNAH10Q8IVF4 4471 aa10.33□□□□□ -0.76
SNRNP35-204ENST00000527158 C1orf134Q5TEV5 83 aa10.32□□□□□ -0.76
SNRNP35-204ENST00000527158 LINC00474Q9P2X8 69 aa10.31□□□□□ -0.76
SNRNP35-204ENST00000527158 A0A1W2PNN7 141 aa10.31□□□□□ -0.76
SNRNP35-204ENST00000527158 VPS13DQ5THJ4 4388 aa10.3□□□□□ -0.76
SNRNP35-204ENST00000527158 ETDCA0A1B0GVM5 59 aa10.3□□□□□ -0.76
SNRNP35-204ENST00000527158 LINC00476Q8WZB0 136 aa10.3□□□□□ -0.76
SNRNP35-204ENST00000527158 TRAV7A0A075B6U4 112 aa10.29□□□□□ -0.76
SNRNP35-204ENST00000527158 SPRR1AP35321 89 aa10.29□□□□□ -0.76
SNRNP35-204ENST00000527158 C3orf84H3BNL1 204 aa10.29□□□□□ -0.76
SNRNP35-204ENST00000527158 HAMPP81172 84 aa10.29□□□□□ -0.76
SNRNP35-204ENST00000527158 CHTF8P0CG12 524 aa10.28□□□□□ -0.76
SNRNP35-204ENST00000527158 KRTAP4-16G5E9R7 235 aaPredicted RBP10.27□□□□□ -0.77
SNRNP35-204ENST00000527158 Q6ZRX8 168 aa10.27□□□□□ -0.77
SNRNP35-204ENST00000527158 DHRS4-AS1Q9P1J3 65 aa10.27□□□□□ -0.77
SNRNP35-204ENST00000527158 REG3GQ6UW15 175 aa10.26□□□□□ -0.77
SNRNP35-204ENST00000527158 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
SNRNP35-204ENST00000527158 TGP01266 2768 aa10.24□□□□□ -0.77
SNRNP35-204ENST00000527158 CYSTM1Q9H1C7 97 aa10.24□□□□□ -0.77
SNRNP35-204ENST00000527158 A0A1B0GW54 56 aa10.22□□□□□ -0.77
SNRNP35-204ENST00000527158 RTL8CO15255 209 aa10.22□□□□□ -0.77
SNRNP35-204ENST00000527158 UBE2BP63146 152 aa10.22□□□□□ -0.77
SNRNP35-204ENST00000527158 PHF5AQ7RTV0 110 aaKnown RBP10.21□□□□□ -0.78
SNRNP35-204ENST00000527158 Q9BRP9 147 aa10.21□□□□□ -0.78
SNRNP35-204ENST00000527158 C20orf197Q8N268 126 aa10.19□□□□□ -0.78
SNRNP35-204ENST00000527158 SPACA4Q8TDM5 124 aa10.19□□□□□ -0.78
SNRNP35-204ENST00000527158 PANO1I0J062 215 aa10.18□□□□□ -0.78
SNRNP35-204ENST00000527158 KLKP1Q107X0 134 aa10.18□□□□□ -0.78
SNRNP35-204ENST00000527158 DEFB105AQ8NG35 78 aa10.18□□□□□ -0.78
SNRNP35-204ENST00000527158 IGLV5-52A0A0A0MRZ9 124 aa10.18□□□□□ -0.78
SNRNP35-204ENST00000527158 KMT2AQ03164 3969 aa10.17□□□□□ -0.78
SNRNP35-204ENST00000527158 FUSP35637 526 aaKnown RBP eCLIP10.17□□□□□ -0.78
SNRNP35-204ENST00000527158 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.17□□□□□ -0.78
SNRNP35-204ENST00000527158 NDUFC1O43677 76 aa10.15□□□□□ -0.78
SNRNP35-204ENST00000527158 TNP2Q05952 138 aa10.15□□□□□ -0.78
SNRNP35-204ENST00000527158 IGLV5-48A0A075B6I7 105 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms