RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.61□□□□□ -1.19
VPS11-202ENST00000526829 IGKV2-29A2NJV5 120 aaPredicted RBP7.61□□□□□ -1.19
VPS11-202ENST00000526829 Q8NAQ8 132 aa7.61□□□□□ -1.19
VPS11-202ENST00000526829 C11orf72Q8NBR9 251 aa7.61□□□□□ -1.19
VPS11-202ENST00000526829 DNAH17Q9UFH2 4485 aa7.61□□□□□ -1.19
VPS11-202ENST00000526829 SPINK13Q1W4C9 94 aa7.6□□□□□ -1.19
VPS11-202ENST00000526829 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
VPS11-202ENST00000526829 APLNQ9ULZ1 77 aa7.6□□□□□ -1.19
VPS11-202ENST00000526829 KIAA1109Q2LD37 5005 aa7.6□□□□□ -1.19
VPS11-202ENST00000526829 hDV103S1A0JD37 113 aa7.6□□□□□ -1.19
VPS11-202ENST00000526829 IGHV3-73A0A0B4J1V6 119 aa7.59□□□□□ -1.19
VPS11-202ENST00000526829 TRAV22A0A0B4J277 110 aa7.59□□□□□ -1.19
VPS11-202ENST00000526829 IGKV3-20P01619 116 aa7.59□□□□□ -1.19
VPS11-202ENST00000526829 COX6A2Q02221 97 aa7.59□□□□□ -1.19
VPS11-202ENST00000526829 FAT2Q9NYQ8 4349 aa7.59□□□□□ -1.19
VPS11-202ENST00000526829 C16orf90A8MZG2 172 aa7.59□□□□□ -1.2
VPS11-202ENST00000526829 SMIM1B2RUZ4 78 aa7.59□□□□□ -1.2
VPS11-202ENST00000526829 GIG44P09565 113 aaPredicted RBP7.59□□□□□ -1.2
VPS11-202ENST00000526829 LINC00242Q5T6M2 205 aa7.59□□□□□ -1.2
VPS11-202ENST00000526829 Q6ZTC4 211 aa7.59□□□□□ -1.2
VPS11-202ENST00000526829 Q9HAA7 133 aa7.59□□□□□ -1.2
VPS11-202ENST00000526829 NACAE9PAV3 2078 aa7.58□□□□□ -1.2
VPS11-202ENST00000526829 IGHV3OR16-12A0A075B7B8 117 aa7.58□□□□□ -1.2
VPS11-202ENST00000526829 DEFB131BA0A096LNP1 70 aa7.58□□□□□ -1.2
VPS11-202ENST00000526829 H0YGX0 51 aa7.58□□□□□ -1.2
VPS11-202ENST00000526829 LINC00528Q8N1L1 170 aa7.58□□□□□ -1.2
VPS11-202ENST00000526829 DNAH2Q9P225 4427 aa7.58□□□□□ -1.2
VPS11-202ENST00000526829 CRPP02741 224 aa7.57□□□□□ -1.2
VPS11-202ENST00000526829 TRBV7-4A0A0J9YYF1 115 aa7.57□□□□□ -1.2
VPS11-202ENST00000526829 IGHV3-53P01767 116 aa7.57□□□□□ -1.2
VPS11-202ENST00000526829 PCLOQ9Y6V0 5065 aa7.57□□□□□ -1.2
VPS11-202ENST00000526829 SPART-AS1P0CW21 52 aa7.56□□□□□ -1.2
VPS11-202ENST00000526829 Q6ZSN1 163 aa7.56□□□□□ -1.2
VPS11-202ENST00000526829 CSNK1G2-AS1Q8NCQ2 148 aa7.56□□□□□ -1.2
VPS11-202ENST00000526829 C14orf132Q9NPU4 83 aa7.56□□□□□ -1.2
VPS11-202ENST00000526829 DYNC1H1Q14204 4646 aaKnown RBP7.55□□□□□ -1.2
VPS11-202ENST00000526829 DNAH11Q96DT5 4516 aa7.55□□□□□ -1.2
VPS11-202ENST00000526829 IGHV3OR16-9A0A0B4J2B5 98 aa7.55□□□□□ -1.2
VPS11-202ENST00000526829 PSPHP1O15172 72 aa7.55□□□□□ -1.2
VPS11-202ENST00000526829 PRR3P79522 188 aaKnown RBP7.55□□□□□ -1.2
VPS11-202ENST00000526829 C6orf99Q4VX62 202 aa7.55□□□□□ -1.2
VPS11-202ENST00000526829 A8MTW9 85 aa7.54□□□□□ -1.2
VPS11-202ENST00000526829 A0A087WYN8 130 aa7.53□□□□□ -1.2
VPS11-202ENST00000526829 IGHV3-38A0A0C4DH36 116 aa7.53□□□□□ -1.2
VPS11-202ENST00000526829 C9orf129Q5T035 196 aaKnown RBP7.53□□□□□ -1.2
VPS11-202ENST00000526829 UBE2DNLQ8IWF7 75 aa7.53□□□□□ -1.2
VPS11-202ENST00000526829 CELA1Q9UNI1 258 aa7.53□□□□□ -1.2
VPS11-202ENST00000526829 SPTSSBQ8NFR3 76 aa7.53□□□□□ -1.2
VPS11-202ENST00000526829 SMIM11BQ8TCY0 68 aa7.53□□□□□ -1.2
VPS11-202ENST00000526829 IGKV2-28A0A075B6P5 120 aa7.52□□□□□ -1.21
VPS11-202ENST00000526829 IGKV2D-28P01615 120 aa7.52□□□□□ -1.21
VPS11-202ENST00000526829 PLA2G1BP04054 148 aaKnown RBP7.52□□□□□ -1.21
VPS11-202ENST00000526829 PRM2P04554 102 aa7.52□□□□□ -1.21
VPS11-202ENST00000526829 A0A1B0GVY2 172 aa7.51□□□□□ -1.21
VPS11-202ENST00000526829 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
VPS11-202ENST00000526829 Q5VV11 94 aa7.51□□□□□ -1.21
VPS11-202ENST00000526829 CYP4F30PQ9H0H9 118 aa7.51□□□□□ -1.21
VPS11-202ENST00000526829 SND1-IT1Q9HBX3 110 aa7.51□□□□□ -1.21
VPS11-202ENST00000526829 PKHD1P08F94 4074 aa7.51□□□□□ -1.21
VPS11-202ENST00000526829 Q75L30 129 aa7.51□□□□□ -1.21
VPS11-202ENST00000526829 PKD1P98161 4303 aa7.51□□□□□ -1.21
VPS11-202ENST00000526829 M0R2N4 97 aa7.5□□□□□ -1.21
VPS11-202ENST00000526829 HTN3P15516 51 aa7.5□□□□□ -1.21
VPS11-202ENST00000526829 ENHOQ6UWT2 76 aa7.5□□□□□ -1.21
VPS11-202ENST00000526829 TMEM254Q8TBM7 123 aa7.5□□□□□ -1.21
VPS11-202ENST00000526829 ZNF706Q9Y5V0 76 aaPredicted RBP7.5□□□□□ -1.21
VPS11-202ENST00000526829 A8MU10 97 aa7.5□□□□□ -1.21
VPS11-202ENST00000526829 HTN1P15515 57 aa7.5□□□□□ -1.21
VPS11-202ENST00000526829 MIR7-3HGQ8N6C7 128 aa7.5□□□□□ -1.21
VPS11-202ENST00000526829 RYR1P21817 5038 aa7.49□□□□□ -1.21
VPS11-202ENST00000526829 NCR3O14931 201 aa7.49□□□□□ -1.21
VPS11-202ENST00000526829 LECT2O14960 151 aa7.49□□□□□ -1.21
VPS11-202ENST00000526829 CDC42SE2Q9NRR3 84 aa7.49□□□□□ -1.21
VPS11-202ENST00000526829 COX7B2Q8TF08 81 aa7.48□□□□□ -1.21
VPS11-202ENST00000526829 ORMDL1Q9P0S3 153 aa7.48□□□□□ -1.21
VPS11-202ENST00000526829 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
VPS11-202ENST00000526829 JMJD7-PLA2G4BH0Y9G9 81 aa7.48□□□□□ -1.21
VPS11-202ENST00000526829 LINC00167Q96N53 147 aa7.48□□□□□ -1.21
VPS11-202ENST00000526829 RTL8CO15255 209 aa7.46□□□□□ -1.21
VPS11-202ENST00000526829 INSP01308 110 aa7.46□□□□□ -1.21
VPS11-202ENST00000526829 CCL18P55774 89 aa7.46□□□□□ -1.21
VPS11-202ENST00000526829 RPL36AP83881 106 aaKnown RBP7.46□□□□□ -1.21
VPS11-202ENST00000526829 RPL36ALQ969Q0 106 aaKnown RBP7.46□□□□□ -1.21
VPS11-202ENST00000526829 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.22
VPS11-202ENST00000526829 LINC00158P58513 81 aa7.45□□□□□ -1.22
VPS11-202ENST00000526829 NTM-AS1Q6ZSK4 140 aa7.44□□□□□ -1.22
VPS11-202ENST00000526829 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
VPS11-202ENST00000526829 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
VPS11-202ENST00000526829 C1orf134Q5TEV5 83 aa7.44□□□□□ -1.22
VPS11-202ENST00000526829 LIMD2Q9BT23 127 aa7.44□□□□□ -1.22
VPS11-202ENST00000526829 ABCA13Q86UQ4 5058 aa7.43□□□□□ -1.22
VPS11-202ENST00000526829 TRBV6-4A0A1B0GX49 114 aa7.43□□□□□ -1.22
VPS11-202ENST00000526829 SLPIP03973 132 aa7.43□□□□□ -1.22
VPS11-202ENST00000526829 ASB16-AS1Q495Z4 193 aa7.43□□□□□ -1.22
VPS11-202ENST00000526829 Q6ZR54 194 aa7.43□□□□□ -1.22
VPS11-202ENST00000526829 UBL5Q9BZL1 73 aa7.43□□□□□ -1.22
VPS11-202ENST00000526829 K7EQD1 137 aa7.42□□□□□ -1.22
VPS11-202ENST00000526829 DEFB130BP0DP73 79 aa7.42□□□□□ -1.22
VPS11-202ENST00000526829 DEFB130AP0DP74 79 aa7.42□□□□□ -1.22
VPS11-202ENST00000526829 PSCAO43653 123 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms