RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 PSCAO43653 123 aa3.95□□□□□ -1.78
ATPAF1-208ENST00000526821 C14orf177Q52M58 125 aa3.95□□□□□ -1.78
ATPAF1-208ENST00000526821 Q6ZRP5 223 aa3.95□□□□□ -1.78
ATPAF1-208ENST00000526821 LINC00337Q8N6G1 96 aa3.95□□□□□ -1.78
ATPAF1-208ENST00000526821 NAA38Q9BRA0 125 aaKnown RBP3.95□□□□□ -1.78
ATPAF1-208ENST00000526821 RYR2Q92736 4967 aa3.95□□□□□ -1.78
ATPAF1-208ENST00000526821 TRAV13-2A0A0B4J235 113 aa3.94□□□□□ -1.78
ATPAF1-208ENST00000526821 M0R2N4 97 aa3.94□□□□□ -1.78
ATPAF1-208ENST00000526821 RPL13AP40429 203 aaKnown RBP3.94□□□□□ -1.78
ATPAF1-208ENST00000526821 FRAS1Q86XX4 4008 aa3.94□□□□□ -1.78
ATPAF1-208ENST00000526821 FAT2Q9NYQ8 4349 aa3.94□□□□□ -1.78
ATPAF1-208ENST00000526821 TRBV10-2A0A0K0K1G8 114 aa3.93□□□□□ -1.78
ATPAF1-208ENST00000526821 LY6G6CO95867 125 aa3.93□□□□□ -1.78
ATPAF1-208ENST00000526821 VPREB1P12018 145 aa3.93□□□□□ -1.78
ATPAF1-208ENST00000526821 C9orf129Q5T035 196 aaKnown RBP3.93□□□□□ -1.78
ATPAF1-208ENST00000526821 XAGE1AQ9HD64 81 aa3.93□□□□□ -1.78
ATPAF1-208ENST00000526821 DNAH8Q96JB1 4490 aa3.92□□□□□ -1.78
ATPAF1-208ENST00000526821 A0A087WTM6 91 aa3.92□□□□□ -1.78
ATPAF1-208ENST00000526821 LOC107984640A0A0U1RRK4 108 aa3.92□□□□□ -1.78
ATPAF1-208ENST00000526821 H7C2G1 150 aa3.92□□□□□ -1.78
ATPAF1-208ENST00000526821 RPL28P46779 137 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-208ENST00000526821 PRR3P79522 188 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-208ENST00000526821 GAGE2EQ4V326 116 aa3.92□□□□□ -1.78
ATPAF1-208ENST00000526821 C1orf134Q5TEV5 83 aa3.92□□□□□ -1.78
ATPAF1-208ENST00000526821 GAGE2DQ9UEU5 116 aa3.92□□□□□ -1.78
ATPAF1-208ENST00000526821 KMT2CQ8NEZ4 4911 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-208ENST00000526821 IGLV6-57P01721 117 aa3.91□□□□□ -1.78
ATPAF1-208ENST00000526821 Q1RN00 199 aa3.91□□□□□ -1.78
ATPAF1-208ENST00000526821 LYRM7Q5U5X0 104 aa3.91□□□□□ -1.78
ATPAF1-208ENST00000526821 KRTAP7-1Q8IUC3 87 aa3.91□□□□□ -1.78
ATPAF1-208ENST00000526821 Q8N814 137 aa3.91□□□□□ -1.78
ATPAF1-208ENST00000526821 C9orf163Q8N9P6 203 aa3.91□□□□□ -1.78
ATPAF1-208ENST00000526821 SMIM11BQ8TCY0 68 aa3.91□□□□□ -1.78
ATPAF1-208ENST00000526821 TMEM126AQ9H061 195 aa3.91□□□□□ -1.78
ATPAF1-208ENST00000526821 PRO0461Q9UI25 63 aa3.91□□□□□ -1.78
ATPAF1-208ENST00000526821 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.9□□□□□ -1.79
ATPAF1-208ENST00000526821 TRBV20-1A0A075B6N2 111 aa3.9□□□□□ -1.79
ATPAF1-208ENST00000526821 C16orf90A8MZG2 172 aa3.9□□□□□ -1.79
ATPAF1-208ENST00000526821 NCR3O14931 201 aa3.9□□□□□ -1.79
ATPAF1-208ENST00000526821 TCL1BO95988 128 aa3.9□□□□□ -1.79
ATPAF1-208ENST00000526821 PSMB2P49721 201 aa3.9□□□□□ -1.79
ATPAF1-208ENST00000526821 LINC01547P58512 204 aaPredicted RBP3.9□□□□□ -1.79
ATPAF1-208ENST00000526821 RPL18AQ02543 176 aaKnown RBP3.9□□□□□ -1.79
ATPAF1-208ENST00000526821 A0A096LNI7 61 aa3.89□□□□□ -1.79
ATPAF1-208ENST00000526821 M0R378 163 aa3.89□□□□□ -1.79
ATPAF1-208ENST00000526821 RTL8CO15255 209 aa3.89□□□□□ -1.79
ATPAF1-208ENST00000526821 COX6CP09669 75 aa3.89□□□□□ -1.79
ATPAF1-208ENST00000526821 GAGE2BQ13066 116 aa3.89□□□□□ -1.79
ATPAF1-208ENST00000526821 SDIM1Q6ZPB5 146 aa3.89□□□□□ -1.79
ATPAF1-208ENST00000526821 OR13C6PQ8NH95 151 aa3.89□□□□□ -1.79
ATPAF1-208ENST00000526821 PKD1P98161 4303 aa3.89□□□□□ -1.79
ATPAF1-208ENST00000526821 TRBV10-3A0A0K0K1G6 114 aa3.88□□□□□ -1.79
ATPAF1-208ENST00000526821 LCE6AA0A183 80 aa3.88□□□□□ -1.79
ATPAF1-208ENST00000526821 FAM168BA1KXE4 195 aa3.88□□□□□ -1.79
ATPAF1-208ENST00000526821 H3BMG7 143 aa3.88□□□□□ -1.79
ATPAF1-208ENST00000526821 LST1O00453 97 aa3.88□□□□□ -1.79
ATPAF1-208ENST00000526821 SCGB1C2P0DMR2 95 aa3.88□□□□□ -1.79
ATPAF1-208ENST00000526821 S100A7L2Q5SY68 101 aa3.88□□□□□ -1.79
ATPAF1-208ENST00000526821 C7orf33Q8WU49 177 aa3.88□□□□□ -1.79
ATPAF1-208ENST00000526821 PKIGQ9Y2B9 76 aa3.88□□□□□ -1.79
ATPAF1-208ENST00000526821 EPM2AB3EWF7 344 aa3.87□□□□□ -1.79
ATPAF1-208ENST00000526821 H0YGX0 51 aa3.87□□□□□ -1.79
ATPAF1-208ENST00000526821 M0QXV9 152 aa3.87□□□□□ -1.79
ATPAF1-208ENST00000526821 ATXN8Q156A1 80 aa3.87□□□□□ -1.79
ATPAF1-208ENST00000526821 CLEC2BQ92478 149 aa3.87□□□□□ -1.79
ATPAF1-208ENST00000526821 LINC01600Q96MT4 127 aa3.87□□□□□ -1.79
ATPAF1-208ENST00000526821 FAM218AQ96MZ4 157 aa3.87□□□□□ -1.79
ATPAF1-208ENST00000526821 KCNQ1DNQ9H478 68 aa3.87□□□□□ -1.79
ATPAF1-208ENST00000526821 RYR3Q15413 4870 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 IGLV1-50A0A075B6I6 118 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 TRAV23DV6A0A075B6W5 121 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 A0A1W2PNN7 141 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 TRACP01848 142 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 ETDBQ3ZM63 59 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 LINC01620Q4KN68 170 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 NKAPP1Q8N9T2 125 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 LINC00474Q9P2X8 69 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 C22orf24Q9Y442 160 aa3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 DYNC1H1Q14204 4646 aaKnown RBP3.86□□□□□ -1.79
ATPAF1-208ENST00000526821 IGKV2-24A0A0C4DH68 120 aa3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 TRBV7-6A0A0J9YX20 115 aa3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 A0A1B0GX51 115 aa3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 KRTAP4-16G5E9R7 235 aaPredicted RBP3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 PANO1I0J062 215 aa3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 ZNF73O43830 326 aaPredicted RBP3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 CHTF8P0CG12 524 aa3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 SPRR1AP35321 89 aa3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 Q6Q795 121 aa3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 MRPL55Q7Z7F7 128 aaKnown RBP3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 SPACA4Q8TDM5 124 aa3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 LINC00167Q96N53 147 aa3.85□□□□□ -1.79
ATPAF1-208ENST00000526821 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
ATPAF1-208ENST00000526821 XGP55808 180 aa3.84□□□□□ -1.79
ATPAF1-208ENST00000526821 ELOF1P60002 83 aaKnown RBP3.84□□□□□ -1.79
ATPAF1-208ENST00000526821 LINC00575Q6W349 94 aa3.84□□□□□ -1.79
ATPAF1-208ENST00000526821 FAM19A5Q7Z5A7 132 aaPredicted RBP3.84□□□□□ -1.79
ATPAF1-208ENST00000526821 TEN1Q86WV5 123 aa3.84□□□□□ -1.79
ATPAF1-208ENST00000526821 PPDPFLQ8WWR9 84 aa3.84□□□□□ -1.79
ATPAF1-208ENST00000526821 DIRC1Q969H9 104 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms