RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 FBN1P35555 2871 aaKnown RBP8.7□□□□□ -1.02
CAPN1-202ENST00000524773 CSMD3Q7Z407 3707 aa8.69□□□□□ -1.02
CAPN1-202ENST00000524773 TRBV7-6A0A0J9YX20 115 aa8.69□□□□□ -1.02
CAPN1-202ENST00000524773 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
CAPN1-202ENST00000524773 Q6ZRP5 223 aa8.68□□□□□ -1.02
CAPN1-202ENST00000524773 SPART-AS1P0CW21 52 aa8.67□□□□□ -1.02
CAPN1-202ENST00000524773 LRCOL1A6NCL2 159 aa8.67□□□□□ -1.02
CAPN1-202ENST00000524773 RPL37AP8A6NKH3 93 aa8.67□□□□□ -1.02
CAPN1-202ENST00000524773 HIGD2AQ9BW72 106 aa8.67□□□□□ -1.02
CAPN1-202ENST00000524773 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
CAPN1-202ENST00000524773 APOC4P55056 127 aa8.66□□□□□ -1.02
CAPN1-202ENST00000524773 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
CAPN1-202ENST00000524773 PKIGQ9Y2B9 76 aa8.66□□□□□ -1.02
CAPN1-202ENST00000524773 MAST4O15021 2626 aa8.66□□□□□ -1.02
CAPN1-202ENST00000524773 A0A0G2JQZ4 141 aa8.65□□□□□ -1.02
CAPN1-202ENST00000524773 A0A1W2PNN7 141 aa8.65□□□□□ -1.02
CAPN1-202ENST00000524773 PDE6GP18545 87 aa8.65□□□□□ -1.02
CAPN1-202ENST00000524773 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
CAPN1-202ENST00000524773 EPM2AB3EWF7 344 aa8.65□□□□□ -1.02
CAPN1-202ENST00000524773 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
CAPN1-202ENST00000524773 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.02
CAPN1-202ENST00000524773 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
CAPN1-202ENST00000524773 WIPF1O43516 503 aa8.64□□□□□ -1.03
CAPN1-202ENST00000524773 PRB2P02812 416 aaPredicted RBP8.64□□□□□ -1.03
CAPN1-202ENST00000524773 NOTCH1P46531 2555 aa8.63□□□□□ -1.03
CAPN1-202ENST00000524773 IGKV2D-24A0A075B6R9 120 aa8.63□□□□□ -1.03
CAPN1-202ENST00000524773 GVQW2A0A096LPI5 108 aaPredicted RBP8.63□□□□□ -1.03
CAPN1-202ENST00000524773 A0A0U1RQV1 116 aa8.63□□□□□ -1.03
CAPN1-202ENST00000524773 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
CAPN1-202ENST00000524773 M0R378 163 aa8.63□□□□□ -1.03
CAPN1-202ENST00000524773 BCE1O60756 84 aa8.63□□□□□ -1.03
CAPN1-202ENST00000524773 KPRPQ5T749 579 aaPredicted RBP8.62□□□□□ -1.03
CAPN1-202ENST00000524773 ST20-AS1Q8NBB2 130 aa8.62□□□□□ -1.03
CAPN1-202ENST00000524773 Q6ZTC4 211 aa8.61□□□□□ -1.03
CAPN1-202ENST00000524773 Q8N377 158 aa8.61□□□□□ -1.03
CAPN1-202ENST00000524773 BRK1Q8WUW1 75 aa8.61□□□□□ -1.03
CAPN1-202ENST00000524773 SMIM26A0A096LP01 95 aa8.61□□□□□ -1.03
CAPN1-202ENST00000524773 KRTAP26-1Q6PEX3 210 aa8.61□□□□□ -1.03
CAPN1-202ENST00000524773 SMIM29Q86T20 159 aa8.61□□□□□ -1.03
CAPN1-202ENST00000524773 PRR4Q16378 134 aa8.59□□□□□ -1.03
CAPN1-202ENST00000524773 OCR1Q9BZK8 76 aa8.59□□□□□ -1.03
CAPN1-202ENST00000524773 ESRGQ1W209 222 aa8.59□□□□□ -1.03
CAPN1-202ENST00000524773 EGFEM1PQ0D2K5 195 aa8.58□□□□□ -1.04
CAPN1-202ENST00000524773 C7orf33Q8WU49 177 aa8.58□□□□□ -1.04
CAPN1-202ENST00000524773 DEFB116Q30KQ4 102 aa8.58□□□□□ -1.04
CAPN1-202ENST00000524773 STAB1Q9NY15 2570 aa8.58□□□□□ -1.04
CAPN1-202ENST00000524773 PRYO14603 147 aa8.58□□□□□ -1.04
CAPN1-202ENST00000524773 NKAPP1Q8N9T2 125 aa8.58□□□□□ -1.04
CAPN1-202ENST00000524773 MRAPQ8TCY5 172 aa8.57□□□□□ -1.04
CAPN1-202ENST00000524773 CASC10Q5T4H9 136 aa8.56□□□□□ -1.04
CAPN1-202ENST00000524773 COL6A5A8TX70 2615 aa8.56□□□□□ -1.04
CAPN1-202ENST00000524773 A0A1W2PNM2 257 aa8.56□□□□□ -1.04
CAPN1-202ENST00000524773 FUSP35637 526 aaKnown RBP eCLIP8.55□□□□□ -1.04
CAPN1-202ENST00000524773 PRO0628Q9UI54 55 aa8.55□□□□□ -1.04
CAPN1-202ENST00000524773 Q9BRP9 147 aa8.55□□□□□ -1.04
CAPN1-202ENST00000524773 ERC2-IT1O76042 136 aa8.54□□□□□ -1.04
CAPN1-202ENST00000524773 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
CAPN1-202ENST00000524773 LYSTQ99698 3801 aa8.54□□□□□ -1.04
CAPN1-202ENST00000524773 NDUFC1O43677 76 aa8.52□□□□□ -1.04
CAPN1-202ENST00000524773 DNAH10Q8IVF4 4471 aa8.51□□□□□ -1.05
CAPN1-202ENST00000524773 K7EQZ3 153 aa8.51□□□□□ -1.05
CAPN1-202ENST00000524773 C1orf137Q5JT78 98 aa8.51□□□□□ -1.05
CAPN1-202ENST00000524773 COL7A1Q02388 2944 aa8.51□□□□□ -1.05
CAPN1-202ENST00000524773 H3BNG1 76 aa8.5□□□□□ -1.05
CAPN1-202ENST00000524773 KRTAP24-1Q3LI83 254 aa8.49□□□□□ -1.05
CAPN1-202ENST00000524773 KCNQ1DNQ9H478 68 aa8.49□□□□□ -1.05
CAPN1-202ENST00000524773 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
CAPN1-202ENST00000524773 F8WDY8 70 aa8.48□□□□□ -1.05
CAPN1-202ENST00000524773 NBEAL1Q6ZS30 2694 aa8.48□□□□□ -1.05
CAPN1-202ENST00000524773 ETDCA0A1B0GVM5 59 aa8.47□□□□□ -1.05
CAPN1-202ENST00000524773 DSCR10P59022 87 aa8.47□□□□□ -1.05
CAPN1-202ENST00000524773 UBE2BP63146 152 aa8.47□□□□□ -1.05
CAPN1-202ENST00000524773 IGLV5-48A0A075B6I7 105 aa8.46□□□□□ -1.05
CAPN1-202ENST00000524773 KRTAP10-11P60412 298 aa8.46□□□□□ -1.05
CAPN1-202ENST00000524773 Q6ZRX8 168 aa8.46□□□□□ -1.05
CAPN1-202ENST00000524773 DEFB131BA0A096LNP1 70 aa8.44□□□□□ -1.06
CAPN1-202ENST00000524773 WFDC13Q8IUB5 93 aa8.44□□□□□ -1.06
CAPN1-202ENST00000524773 PSPHP1O15172 72 aa8.44□□□□□ -1.06
CAPN1-202ENST00000524773 RPL37AP61513 92 aaKnown RBP8.43□□□□□ -1.06
CAPN1-202ENST00000524773 ATP5EP56381 51 aaPredicted RBP8.43□□□□□ -1.06
CAPN1-202ENST00000524773 C1orf64Q8NEQ6 169 aa8.43□□□□□ -1.06
CAPN1-202ENST00000524773 TENM2Q9NT68 2774 aa8.43□□□□□ -1.06
CAPN1-202ENST00000524773 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
CAPN1-202ENST00000524773 Q8NBF4 154 aa8.42□□□□□ -1.06
CAPN1-202ENST00000524773 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.42□□□□□ -1.06
CAPN1-202ENST00000524773 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
CAPN1-202ENST00000524773 PRLHP81277 87 aa8.41□□□□□ -1.06
CAPN1-202ENST00000524773 TNP2Q05952 138 aa8.4□□□□□ -1.06
CAPN1-202ENST00000524773 IGKV2-24A0A0C4DH68 120 aa8.4□□□□□ -1.07
CAPN1-202ENST00000524773 LINC01556Q5JQF7 62 aa8.4□□□□□ -1.07
CAPN1-202ENST00000524773 LINC00476Q8WZB0 136 aa8.39□□□□□ -1.07
CAPN1-202ENST00000524773 DHRS4-AS1Q9P1J3 65 aa8.39□□□□□ -1.07
CAPN1-202ENST00000524773 hDV103S1A0JD37 113 aa8.39□□□□□ -1.07
CAPN1-202ENST00000524773 PSCAO43653 123 aa8.38□□□□□ -1.07
CAPN1-202ENST00000524773 C11orf45Q8TAV5 145 aa8.38□□□□□ -1.07
CAPN1-202ENST00000524773 A0A1B0GW54 56 aa8.37□□□□□ -1.07
CAPN1-202ENST00000524773 A8MU10 97 aa8.37□□□□□ -1.07
CAPN1-202ENST00000524773 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
CAPN1-202ENST00000524773 A0A096LNI7 61 aa8.37□□□□□ -1.07
CAPN1-202ENST00000524773 CMYA5Q8N3K9 4069 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms