RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 Q5XG85 94 aa3.79□□□□□ -1.8
PUM1-213ENST00000524516 C2orf66Q6UXQ4 117 aa3.79□□□□□ -1.8
PUM1-213ENST00000524516 YPEL4Q96NS1 127 aa3.79□□□□□ -1.8
PUM1-213ENST00000524516 AMELXQ99217 191 aa3.79□□□□□ -1.8
PUM1-213ENST00000524516 SMIM7Q9BQ49 75 aa3.79□□□□□ -1.8
PUM1-213ENST00000524516 LOC389332A0A1B0GUA5 103 aa3.78□□□□□ -1.8
PUM1-213ENST00000524516 A0A1B0GV90 55 aa3.78□□□□□ -1.8
PUM1-213ENST00000524516 DDTP30046 118 aa3.78□□□□□ -1.8
PUM1-213ENST00000524516 CKS2P33552 79 aa3.78□□□□□ -1.8
PUM1-213ENST00000524516 MRPL51Q4U2R6 128 aaKnown RBP3.78□□□□□ -1.8
PUM1-213ENST00000524516 SLC25A34Q6PIV7 304 aa3.78□□□□□ -1.8
PUM1-213ENST00000524516 HIST3H2BBQ8N257 126 aa3.78□□□□□ -1.8
PUM1-213ENST00000524516 C14orf144Q96I85 54 aa3.78□□□□□ -1.8
PUM1-213ENST00000524516 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
PUM1-213ENST00000524516 TRBV24-1A0A075B6N3 115 aa3.77□□□□□ -1.81
PUM1-213ENST00000524516 SPINK8P0C7L1 97 aa3.77□□□□□ -1.81
PUM1-213ENST00000524516 RPL23P62829 140 aaKnown RBP3.77□□□□□ -1.81
PUM1-213ENST00000524516 Q6ZRX8 168 aa3.77□□□□□ -1.81
PUM1-213ENST00000524516 ST20-AS1Q8NBB2 130 aa3.77□□□□□ -1.81
PUM1-213ENST00000524516 TRBV10-3A0A0K0K1G6 114 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST1H2BKO60814 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST1H2BJP06899 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST1H2BOP23527 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST1H2BBP33778 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST1H2BDP58876 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST1H2BCP62807 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 RIGQ13278 110 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 COX17Q14061 63 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 JOSD1Q15040 202 aaPredicted RBP3.76□□□□□ -1.81
PUM1-213ENST00000524516 ADIRFQ15847 76 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST2H2BEQ16778 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 CT83Q5H943 113 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.76□□□□□ -1.81
PUM1-213ENST00000524516 MTURNQ8N3F0 131 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST1H2BHQ93079 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 ZNF625Q96I27 306 aaPredicted RBP3.76□□□□□ -1.81
PUM1-213ENST00000524516 Q96NJ1 140 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST1H2BNQ99877 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 HIST1H2BMQ99879 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 PRO1933Q9H354 126 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 OSTCQ9NRP0 149 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 LAMTOR3Q9UHA4 124 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 NAT8Q9UHE5 227 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 V9GYV3 84 aa3.76□□□□□ -1.81
PUM1-213ENST00000524516 TRGC2P03986 189 aa3.75□□□□□ -1.81
PUM1-213ENST00000524516 FABP4P15090 132 aa3.75□□□□□ -1.81
PUM1-213ENST00000524516 CYSLTR1Q9Y271 337 aa3.75□□□□□ -1.81
PUM1-213ENST00000524516 TCL1BO95988 128 aa3.74□□□□□ -1.81
PUM1-213ENST00000524516 NPYP01303 97 aa3.74□□□□□ -1.81
PUM1-213ENST00000524516 FAM104BQ5XKR9 115 aa3.74□□□□□ -1.81
PUM1-213ENST00000524516 MPLKIPQ8TAP9 179 aa3.74□□□□□ -1.81
PUM1-213ENST00000524516 NAT8BQ9UHF3 227 aa3.74□□□□□ -1.81
PUM1-213ENST00000524516 D6R8Y8 96 aa3.73□□□□□ -1.81
PUM1-213ENST00000524516 M0R143 59 aa3.73□□□□□ -1.81
PUM1-213ENST00000524516 HRES1P13985 223 aa3.73□□□□□ -1.81
PUM1-213ENST00000524516 COA6Q5JTJ3 125 aaKnown RBP3.73□□□□□ -1.81
PUM1-213ENST00000524516 PAPPA-AS1Q5QFB9 102 aa3.73□□□□□ -1.81
PUM1-213ENST00000524516 Q5VV11 94 aa3.73□□□□□ -1.81
PUM1-213ENST00000524516 BOD1L2Q8IYS8 172 aa3.73□□□□□ -1.81
PUM1-213ENST00000524516 HIST1H2BLQ99880 126 aa3.73□□□□□ -1.81
PUM1-213ENST00000524516 CBY1Q9Y3M2 126 aa3.73□□□□□ -1.81
PUM1-213ENST00000524516 SMIM27A0A1W2PRY6 76 aa3.72□□□□□ -1.81
PUM1-213ENST00000524516 MT1BP07438 61 aa3.72□□□□□ -1.81
PUM1-213ENST00000524516 LINC00158P58513 81 aa3.72□□□□□ -1.81
PUM1-213ENST00000524516 MRPL54Q6P161 138 aaKnown RBP3.72□□□□□ -1.81
PUM1-213ENST00000524516 IGFL1Q6UW32 110 aa3.72□□□□□ -1.81
PUM1-213ENST00000524516 ANAPC16Q96DE5 110 aa3.72□□□□□ -1.81
PUM1-213ENST00000524516 KRTAP4-8Q9BYQ9 185 aa3.71□□□□□ -1.82
PUM1-213ENST00000524516 IMUPQ9GZP8 106 aa3.71□□□□□ -1.82
PUM1-213ENST00000524516 A0A0U1RRA0 63 aa3.7□□□□□ -1.82
PUM1-213ENST00000524516 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
PUM1-213ENST00000524516 TINCRA0A1B0GVN0 87 aa3.7□□□□□ -1.82
PUM1-213ENST00000524516 TMEM136Q6ZRR5 245 aa3.7□□□□□ -1.82
PUM1-213ENST00000524516 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
PUM1-213ENST00000524516 IGLV5-45A0A087WSX0 123 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 A0A1B0GW15 77 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 IGIPA6NJ69 53 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 H3BRM9 83 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 SCGB1D1O95968 90 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 LINC00614P0C842 121 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 G0S2P27469 103 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 PMVKQ15126 192 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 PRELID3AQ96N28 172 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 SNHG12Q9BXW3 62 aa3.69□□□□□ -1.82
PUM1-213ENST00000524516 A0A1B0GXF2 115 aa3.68□□□□□ -1.82
PUM1-213ENST00000524516 DLEU1O43261 78 aa3.68□□□□□ -1.82
PUM1-213ENST00000524516 SPRR1BP22528 89 aa3.68□□□□□ -1.82
PUM1-213ENST00000524516 TRAPPC1Q9Y5R8 145 aa3.68□□□□□ -1.82
PUM1-213ENST00000524516 A8MUU9 505 aa3.67□□□□□ -1.82
PUM1-213ENST00000524516 PPBPP02775 128 aa3.67□□□□□ -1.82
PUM1-213ENST00000524516 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
PUM1-213ENST00000524516 ORMDL3Q8N138 153 aa3.67□□□□□ -1.82
PUM1-213ENST00000524516 MIEN1Q9BRT3 115 aa3.67□□□□□ -1.82
PUM1-213ENST00000524516 COL5A1-AS1Q5SY13 56 aa3.66□□□□□ -1.82
PUM1-213ENST00000524516 COX19Q49B96 90 aa3.65□□□□□ -1.83
PUM1-213ENST00000524516 ORMDL2Q53FV1 153 aa3.65□□□□□ -1.83
PUM1-213ENST00000524516 Q8N8P6 123 aa3.65□□□□□ -1.83
PUM1-213ENST00000524516 VAMP8Q9BV40 100 aa3.65□□□□□ -1.83
PUM1-213ENST00000524516 MAP1LC3AQ9H492 121 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms