RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 SMIM11BQ8TCY0 68 aa4.62□□□□□ -1.67
VPS11-201ENST00000524454 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
VPS11-201ENST00000524454 HERC2O95714 4834 aa4.62□□□□□ -1.67
VPS11-201ENST00000524454 IGLV5-37A0A075B6J1 123 aa4.61□□□□□ -1.67
VPS11-201ENST00000524454 USP17L23D6RBM5 183 aa4.61□□□□□ -1.67
VPS11-201ENST00000524454 CNBPP62633 177 aaKnown RBP4.61□□□□□ -1.67
VPS11-201ENST00000524454 ETDBQ3ZM63 59 aa4.61□□□□□ -1.67
VPS11-201ENST00000524454 Q6ZRU5 148 aa4.61□□□□□ -1.67
VPS11-201ENST00000524454 LINC00167Q96N53 147 aa4.61□□□□□ -1.67
VPS11-201ENST00000524454 Q9HAA7 133 aa4.61□□□□□ -1.67
VPS11-201ENST00000524454 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
VPS11-201ENST00000524454 C16orf90A8MZG2 172 aa4.6□□□□□ -1.67
VPS11-201ENST00000524454 M0R378 163 aa4.6□□□□□ -1.67
VPS11-201ENST00000524454 DNAL4O96015 105 aa4.6□□□□□ -1.67
VPS11-201ENST00000524454 HIGD2BQ4VC39 106 aa4.6□□□□□ -1.67
VPS11-201ENST00000524454 C9orf116Q5BN46 136 aaPredicted RBP4.6□□□□□ -1.67
VPS11-201ENST00000524454 S100A7L2Q5SY68 101 aa4.6□□□□□ -1.67
VPS11-201ENST00000524454 OR13C6PQ8NH95 151 aa4.6□□□□□ -1.67
VPS11-201ENST00000524454 FAM240AA0A1B0GVK7 77 aa4.59□□□□□ -1.67
VPS11-201ENST00000524454 VPREB1P12018 145 aa4.59□□□□□ -1.67
VPS11-201ENST00000524454 CLEC2BQ92478 149 aa4.59□□□□□ -1.67
VPS11-201ENST00000524454 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
VPS11-201ENST00000524454 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
VPS11-201ENST00000524454 DNAH5Q8TE73 4624 aa4.58□□□□□ -1.68
VPS11-201ENST00000524454 LOC107984640A0A0U1RRK4 108 aa4.58□□□□□ -1.68
VPS11-201ENST00000524454 INAFM2P0DMQ5 153 aa4.58□□□□□ -1.68
VPS11-201ENST00000524454 Q6ZRP5 223 aa4.58□□□□□ -1.68
VPS11-201ENST00000524454 RYR1P21817 5038 aa4.57□□□□□ -1.68
VPS11-201ENST00000524454 TRAV23DV6A0A075B6W5 121 aa4.57□□□□□ -1.68
VPS11-201ENST00000524454 A0A087WTM6 91 aa4.57□□□□□ -1.68
VPS11-201ENST00000524454 PSCAO43653 123 aa4.57□□□□□ -1.68
VPS11-201ENST00000524454 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
VPS11-201ENST00000524454 LECT2O14960 151 aa4.56□□□□□ -1.68
VPS11-201ENST00000524454 ZNF73O43830 326 aaPredicted RBP4.56□□□□□ -1.68
VPS11-201ENST00000524454 ACYP1P07311 99 aa4.56□□□□□ -1.68
VPS11-201ENST00000524454 RPL18AQ02543 176 aaKnown RBP4.56□□□□□ -1.68
VPS11-201ENST00000524454 Q8N814 137 aa4.56□□□□□ -1.68
VPS11-201ENST00000524454 Q8NDZ9 215 aa4.56□□□□□ -1.68
VPS11-201ENST00000524454 DIRC1Q969H9 104 aa4.56□□□□□ -1.68
VPS11-201ENST00000524454 FAM218AQ96MZ4 157 aa4.56□□□□□ -1.68
VPS11-201ENST00000524454 ORMDL1Q9P0S3 153 aa4.56□□□□□ -1.68
VPS11-201ENST00000524454 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 A0A087WYN8 130 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 TRBV10-3A0A0K0K1G6 114 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 TMEM256-PLSCR3K7ERE1 68 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 NCR3O14931 201 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 BAALC-AS2P0C853 105 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 ELOF1P60002 83 aaKnown RBP4.55□□□□□ -1.68
VPS11-201ENST00000524454 HAMPP81172 84 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 C6orf99Q4VX62 202 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 C9orf129Q5T035 196 aaKnown RBP4.55□□□□□ -1.68
VPS11-201ENST00000524454 LINC00575Q6W349 94 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 MTURNQ8N3F0 131 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 NKAPP1Q8N9T2 125 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 OBSCN-AS1Q96MR7 158 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 KCNQ1DNQ9H478 68 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 XAGE1AQ9HD64 81 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 LINC00474Q9P2X8 69 aa4.55□□□□□ -1.68
VPS11-201ENST00000524454 LRCOL1A6NCL2 159 aa4.54□□□□□ -1.68
VPS11-201ENST00000524454 JMJD7-PLA2G4BH0Y9G9 81 aa4.54□□□□□ -1.68
VPS11-201ENST00000524454 PRYO14603 147 aa4.54□□□□□ -1.68
VPS11-201ENST00000524454 SLPIP03973 132 aa4.54□□□□□ -1.68
VPS11-201ENST00000524454 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
VPS11-201ENST00000524454 PRR3P79522 188 aaKnown RBP4.54□□□□□ -1.68
VPS11-201ENST00000524454 VPS25Q9BRG1 176 aa4.54□□□□□ -1.68
VPS11-201ENST00000524454 APOBP04114 4563 aaKnown RBP4.53□□□□□ -1.68
VPS11-201ENST00000524454 hADV29S1A0JD25 119 aa4.53□□□□□ -1.68
VPS11-201ENST00000524454 COX7BP24311 80 aa4.53□□□□□ -1.68
VPS11-201ENST00000524454 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
VPS11-201ENST00000524454 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.53□□□□□ -1.68
VPS11-201ENST00000524454 HSPG2P98160 4391 aa4.52□□□□□ -1.69
VPS11-201ENST00000524454 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.52□□□□□ -1.69
VPS11-201ENST00000524454 TEX49A0A1B0GTD5 131 aa4.52□□□□□ -1.69
VPS11-201ENST00000524454 CDK2AP2O75956 126 aa4.52□□□□□ -1.69
VPS11-201ENST00000524454 SPRR1AP35321 89 aa4.52□□□□□ -1.69
VPS11-201ENST00000524454 GAGE2EQ4V326 116 aa4.52□□□□□ -1.69
VPS11-201ENST00000524454 C9orf163Q8N9P6 203 aa4.52□□□□□ -1.69
VPS11-201ENST00000524454 GAGE2DQ9UEU5 116 aa4.52□□□□□ -1.69
VPS11-201ENST00000524454 ABCA13Q86UQ4 5058 aa4.51□□□□□ -1.69
VPS11-201ENST00000524454 IGLV1-50A0A075B6I6 118 aa4.51□□□□□ -1.69
VPS11-201ENST00000524454 IGLV5-52A0A0A0MRZ9 124 aa4.51□□□□□ -1.69
VPS11-201ENST00000524454 PDE6GP18545 87 aa4.51□□□□□ -1.69
VPS11-201ENST00000524454 C7orf33Q8WU49 177 aa4.51□□□□□ -1.69
VPS11-201ENST00000524454 DHRS4-AS1Q9P1J3 65 aa4.51□□□□□ -1.69
VPS11-201ENST00000524454 C22orf24Q9Y442 160 aa4.51□□□□□ -1.69
VPS11-201ENST00000524454 PCLOQ9Y6V0 5065 aa4.5□□□□□ -1.69
VPS11-201ENST00000524454 EPM2AB3EWF7 344 aa4.5□□□□□ -1.69
VPS11-201ENST00000524454 SCGB1A1P11684 91 aa4.5□□□□□ -1.69
VPS11-201ENST00000524454 MRPL55Q7Z7F7 128 aaKnown RBP4.5□□□□□ -1.69
VPS11-201ENST00000524454 KRTAP4-16G5E9R7 235 aaPredicted RBP4.49□□□□□ -1.69
VPS11-201ENST00000524454 XGP55808 180 aa4.49□□□□□ -1.69
VPS11-201ENST00000524454 SERTAD4-AS1Q5TG53 156 aa4.49□□□□□ -1.69
VPS11-201ENST00000524454 SDIM1Q6ZPB5 146 aa4.49□□□□□ -1.69
VPS11-201ENST00000524454 Q6ZRX8 168 aa4.49□□□□□ -1.69
VPS11-201ENST00000524454 FAM30AQ9NZY2 134 aa4.49□□□□□ -1.69
VPS11-201ENST00000524454 LOC110117498A0A087WWA1 95 aa4.48□□□□□ -1.69
VPS11-201ENST00000524454 H0Y9J4 135 aa4.48□□□□□ -1.69
VPS11-201ENST00000524454 SMR3BP02814 79 aaPredicted RBP4.48□□□□□ -1.69
VPS11-201ENST00000524454 GAGE2BQ13066 116 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms