RNA–Protein interactions for RNA: ENST00000524324.5

CA1-223, Transcript of carbonic anhydrase 1, human

TSL 2

Gene CA1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CA1-223	ENST00000524324	HIST1H4G	Q99525	98 aa		4.85	□□□□□ -1.63
CA1-223	ENST00000524324	C12orf57	Q99622	126 aa		4.85	□□□□□ -1.63
CA1-223	ENST00000524324	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.85	□□□□□ -1.63
CA1-223	ENST00000524324	NDUFC2	O95298	119 aa		4.84	□□□□□ -1.63
CA1-223	ENST00000524324	SMIM6	P0DI80	62 aa		4.84	□□□□□ -1.63
CA1-223	ENST00000524324	IFITM1	P13164	125 aa		4.84	□□□□□ -1.63
CA1-223	ENST00000524324	HIGD1B	Q9P298	99 aa		4.84	□□□□□ -1.63
CA1-223	ENST00000524324		A4D1N5	150 aa		4.83	□□□□□ -1.64
CA1-223	ENST00000524324		Q6ZVH6	145 aa		4.83	□□□□□ -1.64
CA1-223	ENST00000524324	LINC00518	Q8N0U6	118 aa		4.83	□□□□□ -1.64
CA1-223	ENST00000524324	LINC00337	Q8N6G1	96 aa		4.83	□□□□□ -1.64
CA1-223	ENST00000524324	OR13C6P	Q8NH95	151 aa		4.83	□□□□□ -1.64
CA1-223	ENST00000524324	UQCR10	Q9UDW1	63 aa		4.83	□□□□□ -1.64
CA1-223	ENST00000524324	DDT	P30046	118 aa		4.82	□□□□□ -1.64
CA1-223	ENST00000524324	TRBV10-2	A0A0K0K1G8	114 aa		4.81	□□□□□ -1.64
CA1-223	ENST00000524324	IGLV6-57	P01721	117 aa		4.81	□□□□□ -1.64
CA1-223	ENST00000524324	IGLV7-43	P04211	117 aa		4.81	□□□□□ -1.64
CA1-223	ENST00000524324	S100A7L2	Q5SY68	101 aa		4.81	□□□□□ -1.64
CA1-223	ENST00000524324	REG3G	Q6UW15	175 aa		4.81	□□□□□ -1.64
CA1-223	ENST00000524324	CEND1	Q8N111	149 aa		4.81	□□□□□ -1.64
CA1-223	ENST00000524324	TMEM126A	Q9H061	195 aa		4.81	□□□□□ -1.64
CA1-223	ENST00000524324	ABCA13	Q86UQ4	5058 aa		4.8	□□□□□ -1.64
CA1-223	ENST00000524324		A6NDN8	102 aa		4.8	□□□□□ -1.64
CA1-223	ENST00000524324	CFC1B	P0CG36	223 aa		4.8	□□□□□ -1.64
CA1-223	ENST00000524324	CFC1	P0CG37	223 aa		4.8	□□□□□ -1.64
CA1-223	ENST00000524324	FXYD2	P54710	66 aa		4.8	□□□□□ -1.64
CA1-223	ENST00000524324	KCNQ1DN	Q9H478	68 aa		4.8	□□□□□ -1.64
CA1-223	ENST00000524324	BCE1	O60756	84 aa		4.79	□□□□□ -1.64
CA1-223	ENST00000524324	INAFM2	P0DMQ5	153 aa		4.79	□□□□□ -1.64
CA1-223	ENST00000524324	CTAG1A	P78358	180 aa		4.79	□□□□□ -1.64
CA1-223	ENST00000524324	PRLH	P81277	87 aa		4.79	□□□□□ -1.64
CA1-223	ENST00000524324	TAL2	Q16559	108 aa		4.79	□□□□□ -1.64
CA1-223	ENST00000524324	FAM19A1	Q7Z5A9	133 aa		4.79	□□□□□ -1.64
CA1-223	ENST00000524324	COPS9	Q8WXC6	57 aa		4.79	□□□□□ -1.64
CA1-223	ENST00000524324	PPDPF	Q9H3Y8	114 aa		4.79	□□□□□ -1.64
CA1-223	ENST00000524324	VPS13B	Q7Z7G8	4022 aa		4.79	□□□□□ -1.64
CA1-223	ENST00000524324	KRTAP4-8	A0A0G2JLE6	195 aa		4.78	□□□□□ -1.64
CA1-223	ENST00000524324	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.78	□□□□□ -1.64
CA1-223	ENST00000524324	PRY	O14603	147 aa		4.78	□□□□□ -1.64
CA1-223	ENST00000524324	SPRR1A	P35321	89 aa		4.78	□□□□□ -1.64
CA1-223	ENST00000524324	TRAV23DV6	A0A075B6W5	121 aa		4.77	□□□□□ -1.65
CA1-223	ENST00000524324		H7C2G1	150 aa		4.77	□□□□□ -1.65
CA1-223	ENST00000524324	ZNF73	O43830	326 aa	Predicted RBP	4.77	□□□□□ -1.65
CA1-223	ENST00000524324	ZNF861P	O60384	105 aa		4.77	□□□□□ -1.65
CA1-223	ENST00000524324	UBE2A	P49459	152 aa		4.77	□□□□□ -1.65
CA1-223	ENST00000524324	HINT1	P49773	126 aa	Predicted RBP	4.77	□□□□□ -1.65
CA1-223	ENST00000524324	HSD52	Q0P140	79 aa		4.77	□□□□□ -1.65
CA1-223	ENST00000524324	KRTAP13-1	Q8IUC0	172 aa		4.77	□□□□□ -1.65
CA1-223	ENST00000524324	SMIM11B	Q8TCY0	68 aa		4.77	□□□□□ -1.65
CA1-223	ENST00000524324	TRAV13-2	A0A0B4J235	113 aa		4.76	□□□□□ -1.65
CA1-223	ENST00000524324		K7ERJ3	54 aa		4.76	□□□□□ -1.65
CA1-223	ENST00000524324	ERC2-IT1	O76042	136 aa		4.76	□□□□□ -1.65
CA1-223	ENST00000524324	RPL13A	P40429	203 aa	Known RBP	4.76	□□□□□ -1.65
CA1-223	ENST00000524324	C6orf99	Q4VX62	202 aa		4.76	□□□□□ -1.65
CA1-223	ENST00000524324	BVES-AS1	Q5T3Y7	98 aa		4.76	□□□□□ -1.65
CA1-223	ENST00000524324	SPINK6	Q6UWN8	80 aa		4.76	□□□□□ -1.65
CA1-223	ENST00000524324	SMCR5	Q8TEV8	140 aa		4.76	□□□□□ -1.65
CA1-223	ENST00000524324	ANAPC11	Q9NYG5	84 aa		4.76	□□□□□ -1.65
CA1-223	ENST00000524324	PCLO	Q9Y6V0	5065 aa		4.75	□□□□□ -1.65
CA1-223	ENST00000524324	ETDC	A0A1B0GVM5	59 aa		4.75	□□□□□ -1.65
CA1-223	ENST00000524324	TSTD3	H0UI37	97 aa		4.75	□□□□□ -1.65
CA1-223	ENST00000524324	LCE1D	Q5T752	114 aa		4.75	□□□□□ -1.65
CA1-223	ENST00000524324	RAB37	Q96AX2	223 aa		4.75	□□□□□ -1.65
CA1-223	ENST00000524324		Q9BRP9	147 aa		4.75	□□□□□ -1.65
CA1-223	ENST00000524324	HIGD2A	Q9BW72	106 aa		4.75	□□□□□ -1.65
CA1-223	ENST00000524324	NHP2	Q9NX24	153 aa	Known RBP	4.75	□□□□□ -1.65
CA1-223	ENST00000524324		H0Y9J4	135 aa		4.74	□□□□□ -1.65
CA1-223	ENST00000524324	RPL28	P46779	137 aa	Known RBP	4.74	□□□□□ -1.65
CA1-223	ENST00000524324	KRTAP9-3	Q9BYQ3	159 aa		4.74	□□□□□ -1.65
CA1-223	ENST00000524324	PKHD1L1	Q86WI1	4243 aa		4.73	□□□□□ -1.65
CA1-223	ENST00000524324		A0A0B4J2C4	111 aa		4.73	□□□□□ -1.65
CA1-223	ENST00000524324	COX7B	P24311	80 aa		4.73	□□□□□ -1.65
CA1-223	ENST00000524324	DIRC1	Q969H9	104 aa		4.73	□□□□□ -1.65
CA1-223	ENST00000524324	PRO1854	Q9UHT4	67 aa		4.73	□□□□□ -1.65
CA1-223	ENST00000524324	KRTAP1-4	P0C5Y4	121 aa		4.72	□□□□□ -1.65
CA1-223	ENST00000524324	PCP4	P48539	62 aa		4.72	□□□□□ -1.65
CA1-223	ENST00000524324		Q6ZRX8	168 aa		4.72	□□□□□ -1.65
CA1-223	ENST00000524324	ST20-AS1	Q8NBB2	130 aa		4.72	□□□□□ -1.65
CA1-223	ENST00000524324		A0A1B0GWB2	263 aa		4.71	□□□□□ -1.66
CA1-223	ENST00000524324	PCP4L1	A6NKN8	68 aa		4.71	□□□□□ -1.66
CA1-223	ENST00000524324	ELOF1	P60002	83 aa	Known RBP	4.71	□□□□□ -1.66
CA1-223	ENST00000524324	BATF	Q16520	125 aa		4.71	□□□□□ -1.66
CA1-223	ENST00000524324		Q1RN00	199 aa		4.7	□□□□□ -1.66
CA1-223	ENST00000524324	PRR26	Q8N8Z3	221 aa		4.7	□□□□□ -1.66
CA1-223	ENST00000524324	NAA38	Q9BRA0	125 aa	Known RBP	4.7	□□□□□ -1.66
CA1-223	ENST00000524324	FLG2	Q5D862	2391 aa	Predicted RBP	4.7	□□□□□ -1.66
CA1-223	ENST00000524324	LRP1	Q07954	4544 aa	Known RBP	4.7	□□□□□ -1.66
CA1-223	ENST00000524324	TRBV7-6	A0A0J9YX20	115 aa		4.69	□□□□□ -1.66
CA1-223	ENST00000524324	TSPAN13	O95857	204 aa		4.69	□□□□□ -1.66
CA1-223	ENST00000524324	GAGE2A	Q6NT46	116 aa		4.69	□□□□□ -1.66
CA1-223	ENST00000524324	CBY1	Q9Y3M2	126 aa		4.69	□□□□□ -1.66
CA1-223	ENST00000524324		A0A087X002	238 aa		4.68	□□□□□ -1.66
CA1-223	ENST00000524324		M0R143	59 aa		4.68	□□□□□ -1.66
CA1-223	ENST00000524324	KRTAP10-8	P60410	259 aa		4.68	□□□□□ -1.66
CA1-223	ENST00000524324	VAMP3	Q15836	100 aa		4.68	□□□□□ -1.66
CA1-223	ENST00000524324	LINC00575	Q6W349	94 aa		4.68	□□□□□ -1.66
CA1-223	ENST00000524324	DEFB105A	Q8NG35	78 aa		4.68	□□□□□ -1.66
CA1-223	ENST00000524324	LINC01600	Q96MT4	127 aa		4.68	□□□□□ -1.66
CA1-223	ENST00000524324	FAM218A	Q96MZ4	157 aa		4.68	□□□□□ -1.66
CA1-223	ENST00000524324	SPRR4	Q96PI1	79 aa		4.68	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms