RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 IGHV3-73A0A0B4J1V6 119 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 TRBV6-4A0A1B0GX49 114 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 TMEM256-PLSCR3K7ERE1 68 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 TSPEAR-AS2P59090 65 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 KRTAP10-1P60331 282 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 MIAQ16674 131 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 FAM19A3Q7Z5A8 133 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 C22orf24Q9Y442 160 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 FLNAP21333 2647 aaKnown RBP2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 EPG5Q9HCE0 2579 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 ZFYVE26Q68DK2 2539 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 TENM4Q6N022 2769 aa2.21□□□□□ -2.05
LINCR-0001-203ENST00000524047 ABCA12Q86UK0 2595 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 MAP1AP78559 2803 aaPredicted RBP2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 TRGV2A0A075B6R0 118 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 TRAV23DV6A0A075B6W5 121 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 A0A0J9YXV3 536 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 PRM2P04554 102 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 GIG44P09565 113 aaPredicted RBP2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 IGHV3-30-3P0DP02 117 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 CXCL6P80162 114 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 FAM229BQ4G0N7 80 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 Q6ZTI0 123 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 C7orf65Q6ZTY9 151 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 DEFB104AQ8WTQ1 72 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 DIRC1Q969H9 104 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 FAM104AQ969W3 186 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 RMI2Q96E14 147 aa2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 NOP10Q9NPE3 64 aaKnown RBP2.21□□□□□ -2.06
LINCR-0001-203ENST00000524047 CENPEQ02224 2701 aa2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 TRGV4A0A0C4DH28 118 aa2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 hDV103S1A0JD37 113 aa2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 IGKV2-29A2NJV5 120 aaPredicted RBP2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 A6NN06 94 aa2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 A8MUN3 132 aa2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 H0Y9J4 135 aa2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 FUSP35637 526 aaKnown RBP eCLIP2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 UBE2AP49459 152 aa2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 SOSTDC1Q6X4U4 206 aa2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 SMR3AQ99954 134 aa2.2□□□□□ -2.06
LINCR-0001-203ENST00000524047 CHD6Q8TD26 2715 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 TRBV7-4A0A0J9YYF1 115 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 LOC100131303A0A0U1RQF7 123 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 JMJD7-PLA2G4BH0Y9G9 81 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 H0YGX0 51 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 NDUFA1O15239 70 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 SYCNQ0VAF6 134 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 NTM-AS1Q6ZSK4 140 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 LINC00269Q8N2A0 174 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 UBL5Q9BZL1 73 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 CYP4F30PQ9H0H9 118 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 WFDC10AQ9H1F0 79 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 CDC42SE2Q9NRR3 84 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 NDUFA12Q9UI09 145 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 SNURFQ9Y675 71 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 MYO9AB2RTY4 2548 aa2.19□□□□□ -2.06
LINCR-0001-203ENST00000524047 CMYA5Q8N3K9 4069 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 SONP18583 2426 aaKnown RBP2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 HIVEP2P31629 2446 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 TLN2Q9Y4G6 2542 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 IGHV3-64A0A075B6Q5 118 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 TRBV6-8A0A0A6YYG3 113 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 TRAV22A0A0B4J277 110 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 KIAA0087Q14695 138 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 RNASE13Q5GAN3 156 aaKnown RBP2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 ENHOQ6UWT2 76 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 NKAPP1Q8N9T2 125 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 WFDC9Q8NEX5 89 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 TMEM254Q8TBM7 123 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 CDKN2A-AS1Q9UH64 79 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 PRO0255Q9UI72 69 aa2.18□□□□□ -2.06
LINCR-0001-203ENST00000524047 MP68P56378 58 aa2.17□□□□□ -2.06
LINCR-0001-203ENST00000524047 COX6A2Q02221 97 aa2.17□□□□□ -2.06
LINCR-0001-203ENST00000524047 ASB16-AS1Q495Z4 193 aa2.17□□□□□ -2.06
LINCR-0001-203ENST00000524047 C14orf132Q9NPU4 83 aa2.17□□□□□ -2.06
LINCR-0001-203ENST00000524047 ITPR2Q14571 2701 aa2.17□□□□□ -2.06
LINCR-0001-203ENST00000524047 CCDC168Q8NDH2 2452 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 ACANP16112 2415 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 TRAV10A0A0B4J240 114 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 C16orf90A8MZG2 172 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 SPART-AS1P0CW21 52 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 DEFB130BP0DP73 79 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 DEFB130AP0DP74 79 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 NREPQ16612 68 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 DEFB135Q30KP9 77 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 LINC01554Q52M75 96 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 LINC00308Q8TCZ7 52 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 COX7B2Q8TF08 81 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 ZNF625Q96I27 306 aaPredicted RBP2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 LIMD2Q9BT23 127 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 ORMDL1Q9P0S3 153 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 NF1P21359 2839 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 HELZ2Q9BYK8 2649 aaKnown RBP2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 UNC79Q9P2D8 2635 aa2.16□□□□□ -2.06
LINCR-0001-203ENST00000524047 SETXQ7Z333 2677 aaKnown RBP2.15□□□□□ -2.06
LINCR-0001-203ENST00000524047 IGLV4-60A0A075B6I1 120 aa2.15□□□□□ -2.07
LINCR-0001-203ENST00000524047 IGHV3OR16-9A0A0B4J2B5 98 aa2.15□□□□□ -2.07
LINCR-0001-203ENST00000524047 LINC00959A0A1B0GUT2 108 aa2.15□□□□□ -2.07
LINCR-0001-203ENST00000524047 HCG22E2RYF7 251 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms