RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 KRTAP10-12P60413 245 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 HERVK_113P63121 156 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 SS18Q15532 418 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 GAGE2EQ4V326 116 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 SPATA45Q537H7 98 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 TMEM170BQ5T4T1 132 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 KRTAP11-1Q8IUC1 163 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 BOD1L2Q8IYS8 172 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 LINC01561Q8N1V8 128 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 COX7B2Q8TF08 81 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 C2orf88Q9BSF0 95 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 GAGE2DQ9UEU5 116 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 NDUFA12Q9UI09 145 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 A0A087X002 238 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 LINC01549A6NIU2 74 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 LINC00587B1AMM8 73 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 J3QQQ9 107 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 COX7A2LO14548 114 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 NDUFA1O15239 70 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 MT1HP80294 61 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 SPAG11BQ08648 103 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 C9orf129Q5T035 196 aaKnown RBP2.18□□□□□ -2.06
NPM1-210ENST00000523339 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 Q8IZM0 81 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 DAND5Q8N907 189 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 ORAOV1Q8WV07 137 aa2.18□□□□□ -2.06
NPM1-210ENST00000523339 OBSCNQ5VST9 7968 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 MYMXA0A1B0GTQ4 84 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 FAM168BA1KXE4 195 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 DLEU1O43261 78 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 SMIM13P0DJ93 91 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 MT3P25713 68 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 G0S2P27469 103 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 NMUP48645 174 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 FXYD2P54710 66 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 FP248Q71RG6 208 aaPredicted RBP2.17□□□□□ -2.06
NPM1-210ENST00000523339 VAMP8Q9BV40 100 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 GEMIN7Q9H840 131 aaKnown RBP2.17□□□□□ -2.06
NPM1-210ENST00000523339 LINC00846Q9NV44 126 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 ANAPC11Q9NYG5 84 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 SSPOA2VEC9 5147 aa2.17□□□□□ -2.06
NPM1-210ENST00000523339 IGKV2-28A0A075B6P5 120 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 A0A0U1RRA0 63 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 C20orf202A1L168 122 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 ZNF815PA8K554 130 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 IGKV2D-28P01615 120 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 UBE2AP49459 152 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 LBHQ53QV2 105 aaPredicted RBP2.16□□□□□ -2.06
NPM1-210ENST00000523339 PAPPA-AS1Q5QFB9 102 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 Q6ZVH6 145 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 C2orf48Q96LS8 159 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 KRTAP4-1Q9BYQ7 146 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 TOMM7Q9P0U1 55 aa2.16□□□□□ -2.06
NPM1-210ENST00000523339 IGLV8-61A0A075B6I0 122 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 LOC107984156A0A0G2JMH3 177 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 K7ERJ3 54 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 TLX1NBP0CAT3 122 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 VPREB1P12018 145 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 DDTP30046 118 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 NPC2P61916 151 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 SEC11AP67812 179 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 CTAG1AP78358 180 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 SPAG11AQ6PDA7 123 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 ARL17AQ8IVW1 177 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 MIR7-3HGQ8N6C7 128 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 MPLKIPQ8TAP9 179 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 MIEN1Q9BRT3 115 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 SPANXDQ9BXN6 97 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 SNHG12Q9BXW3 62 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 SND1-IT1Q9HBX3 110 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 SPANXCQ9NY87 97 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 HIGD1BQ9P298 99 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 ERG28Q9UKR5 140 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 FCGBPQ9Y6R7 5405 aaPredicted RBP2.15□□□□□ -2.07
NPM1-210ENST00000523339 NEBP20929 6669 aa2.15□□□□□ -2.07
NPM1-210ENST00000523339 A0A1B0GWB2 263 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 H3BRM9 83 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 TIMM17BO60830 172 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 LGALS3P17931 250 aaKnown RBP2.14□□□□□ -2.07
NPM1-210ENST00000523339 PFN2P35080 140 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 SMAGPQ0VAQ4 97 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 KRTAP13-3Q3SY46 172 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 BVES-AS1Q5T3Y7 98 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 SLC25A34Q6PIV7 304 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 MUSTN1Q8IVN3 82 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 LINC00308Q8TCZ7 52 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 XAGE1AQ9HD64 81 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 SPANXB1Q9NS25 103 aaPredicted RBP2.14□□□□□ -2.07
NPM1-210ENST00000523339 UQCR10Q9UDW1 63 aa2.14□□□□□ -2.07
NPM1-210ENST00000523339 TRBV30A0A0K0K1B3 111 aa2.13□□□□□ -2.07
NPM1-210ENST00000523339 PCP4L1A6NKN8 68 aa2.13□□□□□ -2.07
NPM1-210ENST00000523339 NDUFC2-KCTD14E9PQ53 114 aa2.13□□□□□ -2.07
NPM1-210ENST00000523339 BCE1O60756 84 aa2.13□□□□□ -2.07
NPM1-210ENST00000523339 CFC1P0CG37 223 aa2.13□□□□□ -2.07
NPM1-210ENST00000523339 HERVK_113P61574 105 aa2.13□□□□□ -2.07
NPM1-210ENST00000523339 FAM229BQ4G0N7 80 aa2.13□□□□□ -2.07
NPM1-210ENST00000523339 C6orf226Q5I0X4 101 aa2.13□□□□□ -2.07
NPM1-210ENST00000523339 Q6Q795 121 aa2.13□□□□□ -2.07
NPM1-210ENST00000523339 IGLV5-37A0A075B6J1 123 aa2.12□□□□□ -2.07
NPM1-210ENST00000523339 A4D1N5 150 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms