RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 NDUFC2O95298 119 aa6.62□□□□□ -1.35
CTNNA1-237ENST00000523275 IGLV6-57P01721 117 aa6.62□□□□□ -1.35
CTNNA1-237ENST00000523275 IGKCP01834 107 aa6.62□□□□□ -1.35
CTNNA1-237ENST00000523275 MUC17Q685J3 4493 aa6.61□□□□□ -1.35
CTNNA1-237ENST00000523275 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-237ENST00000523275 JOSD1Q15040 202 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-237ENST00000523275 ASB16-AS1Q495Z4 193 aa6.6□□□□□ -1.35
CTNNA1-237ENST00000523275 TRAV23DV6A0A075B6W5 121 aa6.59□□□□□ -1.35
CTNNA1-237ENST00000523275 SLC25A20O43772 301 aa6.59□□□□□ -1.35
CTNNA1-237ENST00000523275 ADAMTSL4-AS1Q5T5F5 129 aa6.59□□□□□ -1.35
CTNNA1-237ENST00000523275 SOSTDC1Q6X4U4 206 aa6.59□□□□□ -1.35
CTNNA1-237ENST00000523275 Q8N377 158 aa6.59□□□□□ -1.35
CTNNA1-237ENST00000523275 A0A0J9YXY3 114 aa6.58□□□□□ -1.36
CTNNA1-237ENST00000523275 ZNF73O43830 326 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-237ENST00000523275 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-237ENST00000523275 NPC2P61916 151 aa6.58□□□□□ -1.36
CTNNA1-237ENST00000523275 COLCA2A8K830 154 aa6.57□□□□□ -1.36
CTNNA1-237ENST00000523275 E9PLD3 99 aa6.57□□□□□ -1.36
CTNNA1-237ENST00000523275 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-237ENST00000523275 CBY1Q9Y3M2 126 aa6.57□□□□□ -1.36
CTNNA1-237ENST00000523275 C5orf52A6NGY3 159 aa6.56□□□□□ -1.36
CTNNA1-237ENST00000523275 HINT1P49773 126 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-237ENST00000523275 C9orf153Q5TBE3 101 aa6.56□□□□□ -1.36
CTNNA1-237ENST00000523275 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
CTNNA1-237ENST00000523275 ST20-AS1Q8NBB2 130 aa6.55□□□□□ -1.36
CTNNA1-237ENST00000523275 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
CTNNA1-237ENST00000523275 SLC7A5P1Q8MH63 180 aa6.54□□□□□ -1.36
CTNNA1-237ENST00000523275 SYS1-DBNDD2H3BUS1 97 aa6.53□□□□□ -1.36
CTNNA1-237ENST00000523275 LINC01547P58512 204 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-237ENST00000523275 OR13C6PQ8NH95 151 aa6.53□□□□□ -1.36
CTNNA1-237ENST00000523275 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
CTNNA1-237ENST00000523275 LITAFQ99732 161 aa6.53□□□□□ -1.36
CTNNA1-237ENST00000523275 KRTAP4-1Q9BYQ7 146 aa6.53□□□□□ -1.36
CTNNA1-237ENST00000523275 SPANXCQ9NY87 97 aa6.53□□□□□ -1.36
CTNNA1-237ENST00000523275 TIMM17BO60830 172 aa6.52□□□□□ -1.37
CTNNA1-237ENST00000523275 SPRR1BP22528 89 aa6.51□□□□□ -1.37
CTNNA1-237ENST00000523275 XP32Q5T750 250 aa6.51□□□□□ -1.37
CTNNA1-237ENST00000523275 SLC25A34Q6PIV7 304 aa6.51□□□□□ -1.37
CTNNA1-237ENST00000523275 DHRS4-AS1Q9P1J3 65 aa6.51□□□□□ -1.37
CTNNA1-237ENST00000523275 LINC01545Q5VT33 79 aa6.5□□□□□ -1.37
CTNNA1-237ENST00000523275 SPANXDQ9BXN6 97 aa6.5□□□□□ -1.37
CTNNA1-237ENST00000523275 ZNF815PA8K554 130 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST1H2BKO60814 126 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST1H2BJP06899 126 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST1H2BOP23527 126 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST1H2BBP33778 126 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST1H2BDP58876 126 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST1H2BCP62807 126 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST2H2BEQ16778 126 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 PET117Q6UWS5 81 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 LINC00518Q8N0U6 118 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST1H2BHQ93079 126 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST1H2BNQ99877 126 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 HIST1H2BMQ99879 126 aa6.49□□□□□ -1.37
CTNNA1-237ENST00000523275 LAMTOR3Q9UHA4 124 aa6.48□□□□□ -1.37
CTNNA1-237ENST00000523275 COX7BP24311 80 aa6.47□□□□□ -1.37
CTNNA1-237ENST00000523275 HRCT1Q6UXD1 115 aa6.47□□□□□ -1.37
CTNNA1-237ENST00000523275 LIMD2Q9BT23 127 aa6.47□□□□□ -1.37
CTNNA1-237ENST00000523275 KRTAP9-6A0A140TA67 174 aa6.46□□□□□ -1.38
CTNNA1-237ENST00000523275 ELOF1P60002 83 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-237ENST00000523275 C6orf99Q4VX62 202 aa6.46□□□□□ -1.38
CTNNA1-237ENST00000523275 TTTY13Q9BZ97 58 aa6.46□□□□□ -1.38
CTNNA1-237ENST00000523275 TAL2Q16559 108 aa6.45□□□□□ -1.38
CTNNA1-237ENST00000523275 DEFB105AQ8NG35 78 aa6.45□□□□□ -1.38
CTNNA1-237ENST00000523275 C3orf79P0CE67 100 aa6.44□□□□□ -1.38
CTNNA1-237ENST00000523275 TRBV7-6A0A0J9YX20 115 aa6.43□□□□□ -1.38
CTNNA1-237ENST00000523275 TEX49A0A1B0GTD5 131 aa6.43□□□□□ -1.38
CTNNA1-237ENST00000523275 CD164Q04900 197 aa6.43□□□□□ -1.38
CTNNA1-237ENST00000523275 Q1RN00 199 aa6.43□□□□□ -1.38
CTNNA1-237ENST00000523275 SCGB1D4Q6XE38 83 aa6.43□□□□□ -1.38
CTNNA1-237ENST00000523275 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
CTNNA1-237ENST00000523275 KRTDAPP60985 99 aa6.42□□□□□ -1.38
CTNNA1-237ENST00000523275 COPS9Q8WXC6 57 aa6.42□□□□□ -1.38
CTNNA1-237ENST00000523275 C9orf92A6NGG3 77 aa6.41□□□□□ -1.38
CTNNA1-237ENST00000523275 A0A1B0GWB2 263 aa6.4□□□□□ -1.38
CTNNA1-237ENST00000523275 A6NDN8 102 aa6.4□□□□□ -1.38
CTNNA1-237ENST00000523275 H7C2G1 150 aa6.4□□□□□ -1.38
CTNNA1-237ENST00000523275 IFITM1P13164 125 aa6.4□□□□□ -1.38
CTNNA1-237ENST00000523275 AKR1D1P51857 326 aa6.4□□□□□ -1.38
CTNNA1-237ENST00000523275 PCOTHQ58A44 107 aa6.4□□□□□ -1.38
CTNNA1-237ENST00000523275 COA6Q5JTJ3 125 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-237ENST00000523275 C20orf202A1L168 122 aa6.39□□□□□ -1.39
CTNNA1-237ENST00000523275 ANKRD39Q53RE8 183 aa6.39□□□□□ -1.39
CTNNA1-237ENST00000523275 Q6ZVH6 145 aa6.39□□□□□ -1.39
CTNNA1-237ENST00000523275 SMIM29Q86T20 159 aa6.39□□□□□ -1.39
CTNNA1-237ENST00000523275 IGLV8-61A0A075B6I0 122 aa6.38□□□□□ -1.39
CTNNA1-237ENST00000523275 Q5XG85 94 aa6.38□□□□□ -1.39
CTNNA1-237ENST00000523275 IGLV5-48A0A075B6I7 105 aa6.37□□□□□ -1.39
CTNNA1-237ENST00000523275 A4D1N5 150 aa6.37□□□□□ -1.39
CTNNA1-237ENST00000523275 MUSTN1Q8IVN3 82 aa6.37□□□□□ -1.39
CTNNA1-237ENST00000523275 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
CTNNA1-237ENST00000523275 C1orf195Q5TG92 126 aa6.36□□□□□ -1.39
CTNNA1-237ENST00000523275 ATOH7Q8N100 152 aa6.36□□□□□ -1.39
CTNNA1-237ENST00000523275 A0A0G2JQZ4 141 aa6.35□□□□□ -1.39
CTNNA1-237ENST00000523275 PCP2Q8IVA1 136 aa6.35□□□□□ -1.39
CTNNA1-237ENST00000523275 NHP2Q9NX24 153 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-237ENST00000523275 TRAV13-2A0A0B4J235 113 aa6.34□□□□□ -1.39
CTNNA1-237ENST00000523275 SMIM11BQ8TCY0 68 aa6.33□□□□□ -1.4
CTNNA1-237ENST00000523275 MT1HP80294 61 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 249.1 ms