RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CST9LQ9H4G1 147 aa4.35□□□□□ -1.71
TRAPPC9-212ENST00000521944 F8W036 122 aa4.34□□□□□ -1.71
TRAPPC9-212ENST00000521944 ORMDL2Q53FV1 153 aa4.34□□□□□ -1.71
TRAPPC9-212ENST00000521944 TOMM6Q96B49 74 aa4.34□□□□□ -1.71
TRAPPC9-212ENST00000521944 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
TRAPPC9-212ENST00000521944 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
TRAPPC9-212ENST00000521944 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
TRAPPC9-212ENST00000521944 Q75L30 129 aa4.33□□□□□ -1.72
TRAPPC9-212ENST00000521944 MAP1LC3AQ9H492 121 aa4.33□□□□□ -1.72
TRAPPC9-212ENST00000521944 A0A0U1RRA0 63 aa4.32□□□□□ -1.72
TRAPPC9-212ENST00000521944 RPL23P62829 140 aaKnown RBP4.32□□□□□ -1.72
TRAPPC9-212ENST00000521944 CD164Q04900 197 aa4.32□□□□□ -1.72
TRAPPC9-212ENST00000521944 ERASQ7Z444 233 aa4.32□□□□□ -1.72
TRAPPC9-212ENST00000521944 BOD1L2Q8IYS8 172 aa4.32□□□□□ -1.72
TRAPPC9-212ENST00000521944 SPRR1BP22528 89 aa4.31□□□□□ -1.72
TRAPPC9-212ENST00000521944 LINC00158P58513 81 aa4.31□□□□□ -1.72
TRAPPC9-212ENST00000521944 ALKAL2Q6UX46 152 aa4.31□□□□□ -1.72
TRAPPC9-212ENST00000521944 LAMTOR2Q9Y2Q5 125 aa4.31□□□□□ -1.72
TRAPPC9-212ENST00000521944 A0A0G2JQZ4 141 aa4.3□□□□□ -1.72
TRAPPC9-212ENST00000521944 K7EMI3 77 aa4.3□□□□□ -1.72
TRAPPC9-212ENST00000521944 Q1RN00 199 aa4.3□□□□□ -1.72
TRAPPC9-212ENST00000521944 SCGB3A1Q96QR1 104 aa4.3□□□□□ -1.72
TRAPPC9-212ENST00000521944 H3BRM9 83 aa4.29□□□□□ -1.72
TRAPPC9-212ENST00000521944 S100A8P05109 93 aa4.29□□□□□ -1.72
TRAPPC9-212ENST00000521944 SRP19P09132 144 aaKnown RBP4.29□□□□□ -1.72
TRAPPC9-212ENST00000521944 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC9-212ENST00000521944 IGLC3P0DOY3 106 aa4.28□□□□□ -1.72
TRAPPC9-212ENST00000521944 PMVKQ15126 192 aa4.28□□□□□ -1.72
TRAPPC9-212ENST00000521944 TRBV20-1A0A075B6N2 111 aa4.27□□□□□ -1.73
TRAPPC9-212ENST00000521944 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
TRAPPC9-212ENST00000521944 OBSCN-AS1Q96MR7 158 aa4.27□□□□□ -1.73
TRAPPC9-212ENST00000521944 C10orf91Q5T1B1 145 aa4.26□□□□□ -1.73
TRAPPC9-212ENST00000521944 NXT2Q9NPJ8 142 aaKnown RBP4.26□□□□□ -1.73
TRAPPC9-212ENST00000521944 C5orf52A6NGY3 159 aa4.25□□□□□ -1.73
TRAPPC9-212ENST00000521944 KRTAP16-1A8MUX0 517 aa4.25□□□□□ -1.73
TRAPPC9-212ENST00000521944 C9JQL5 133 aa4.25□□□□□ -1.73
TRAPPC9-212ENST00000521944 DDTP30046 118 aa4.25□□□□□ -1.73
TRAPPC9-212ENST00000521944 ADIRFQ15847 76 aa4.25□□□□□ -1.73
TRAPPC9-212ENST00000521944 MIR7-3HGQ8N6C7 128 aa4.25□□□□□ -1.73
TRAPPC9-212ENST00000521944 KRTAP2-1Q9BYU5 128 aa4.25□□□□□ -1.73
TRAPPC9-212ENST00000521944 G0S2P27469 103 aa4.24□□□□□ -1.73
TRAPPC9-212ENST00000521944 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
TRAPPC9-212ENST00000521944 ATP5L2Q7Z4Y8 100 aa4.24□□□□□ -1.73
TRAPPC9-212ENST00000521944 PRO1933Q9H354 126 aa4.23□□□□□ -1.73
TRAPPC9-212ENST00000521944 LAMTOR3Q9UHA4 124 aa4.23□□□□□ -1.73
TRAPPC9-212ENST00000521944 FAM236DA0A1B0GTK5 79 aa4.22□□□□□ -1.73
TRAPPC9-212ENST00000521944 LINC01546A6NGU7 62 aa4.22□□□□□ -1.73
TRAPPC9-212ENST00000521944 FAM236CP0DP71 79 aa4.22□□□□□ -1.73
TRAPPC9-212ENST00000521944 HRES1P13985 223 aa4.22□□□□□ -1.73
TRAPPC9-212ENST00000521944 JOSD1Q15040 202 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC9-212ENST00000521944 SFTA2Q6UW10 78 aa4.22□□□□□ -1.73
TRAPPC9-212ENST00000521944 SLC51BQ86UW2 128 aa4.22□□□□□ -1.73
TRAPPC9-212ENST00000521944 LOC107984156A0A0G2JMH3 177 aa4.21□□□□□ -1.74
TRAPPC9-212ENST00000521944 TRBV10-2A0A0K0K1G8 114 aa4.21□□□□□ -1.74
TRAPPC9-212ENST00000521944 C11orf86A6NJI1 115 aa4.21□□□□□ -1.74
TRAPPC9-212ENST00000521944 S100A12P80511 92 aa4.21□□□□□ -1.74
TRAPPC9-212ENST00000521944 C6orf99Q4VX62 202 aa4.21□□□□□ -1.74
TRAPPC9-212ENST00000521944 SLC25A34Q6PIV7 304 aa4.21□□□□□ -1.74
TRAPPC9-212ENST00000521944 ARL17AQ8IVW1 177 aa4.21□□□□□ -1.74
TRAPPC9-212ENST00000521944 NAT8Q9UHE5 227 aa4.21□□□□□ -1.74
TRAPPC9-212ENST00000521944 ZNF73O43830 326 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC9-212ENST00000521944 AKR1D1P51857 326 aa4.2□□□□□ -1.74
TRAPPC9-212ENST00000521944 PCP2Q8IVA1 136 aa4.2□□□□□ -1.74
TRAPPC9-212ENST00000521944 A6NN06 94 aa4.19□□□□□ -1.74
TRAPPC9-212ENST00000521944 A8MUU9 505 aa4.19□□□□□ -1.74
TRAPPC9-212ENST00000521944 TRAV23DV6A0A075B6W5 121 aa4.18□□□□□ -1.74
TRAPPC9-212ENST00000521944 ATP6V1G1O75348 118 aa4.18□□□□□ -1.74
TRAPPC9-212ENST00000521944 Q96NJ1 140 aa4.18□□□□□ -1.74
TRAPPC9-212ENST00000521944 A0A096LNJ9 63 aa4.17□□□□□ -1.74
TRAPPC9-212ENST00000521944 SCGB1D1O95968 90 aa4.17□□□□□ -1.74
TRAPPC9-212ENST00000521944 NDUFA6P56556 154 aa4.16□□□□□ -1.74
TRAPPC9-212ENST00000521944 MEIG1Q5JSS6 88 aa4.16□□□□□ -1.74
TRAPPC9-212ENST00000521944 TMEM170BQ5T4T1 132 aa4.16□□□□□ -1.74
TRAPPC9-212ENST00000521944 FA2HQ7L5A8 372 aa4.16□□□□□ -1.74
TRAPPC9-212ENST00000521944 TMEM223A0PJW6 202 aa4.15□□□□□ -1.75
TRAPPC9-212ENST00000521944 LINC01549A6NIU2 74 aa4.15□□□□□ -1.75
TRAPPC9-212ENST00000521944 TCL1BO95988 128 aa4.15□□□□□ -1.75
TRAPPC9-212ENST00000521944 IGFL1Q6UW32 110 aa4.15□□□□□ -1.75
TRAPPC9-212ENST00000521944 NOTCH2NLQ7Z3S9 236 aa4.15□□□□□ -1.75
TRAPPC9-212ENST00000521944 DEFB105AQ8NG35 78 aa4.15□□□□□ -1.75
TRAPPC9-212ENST00000521944 LITAFQ99732 161 aa4.15□□□□□ -1.75
TRAPPC9-212ENST00000521944 SPANXB1Q9NS25 103 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC9-212ENST00000521944 SPRR2EP22531 72 aa4.14□□□□□ -1.75
TRAPPC9-212ENST00000521944 SPRR2BP35325 72 aa4.14□□□□□ -1.75
TRAPPC9-212ENST00000521944 SPRR2AP35326 72 aa4.14□□□□□ -1.75
TRAPPC9-212ENST00000521944 S100A7L2Q5SY68 101 aa4.14□□□□□ -1.75
TRAPPC9-212ENST00000521944 Q6ZVH6 145 aa4.14□□□□□ -1.75
TRAPPC9-212ENST00000521944 TEX49A0A1B0GTD5 131 aa4.13□□□□□ -1.75
TRAPPC9-212ENST00000521944 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
TRAPPC9-212ENST00000521944 RBM12B-AS1Q9P1G2 102 aa4.13□□□□□ -1.75
TRAPPC9-212ENST00000521944 DHRS4-AS1Q9P1J3 65 aa4.13□□□□□ -1.75
TRAPPC9-212ENST00000521944 A8MWP4 228 aa4.12□□□□□ -1.75
TRAPPC9-212ENST00000521944 MT1BP07438 61 aa4.12□□□□□ -1.75
TRAPPC9-212ENST00000521944 UBE2V1Q13404 147 aa4.12□□□□□ -1.75
TRAPPC9-212ENST00000521944 TAL2Q16559 108 aa4.12□□□□□ -1.75
TRAPPC9-212ENST00000521944 SOSTDC1Q6X4U4 206 aa4.12□□□□□ -1.75
TRAPPC9-212ENST00000521944 NDUFC2O95298 119 aa4.11□□□□□ -1.75
TRAPPC9-212ENST00000521944 HERV-K104P63124 156 aa4.11□□□□□ -1.75
TRAPPC9-212ENST00000521944 RGS21Q2M5E4 152 aa4.11□□□□□ -1.75
TRAPPC9-212ENST00000521944 BAGE3Q86Y29 109 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms