RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 PKD1L1Q8TDX9 2849 aa4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 TRBV10-3A0A0K0K1G6 114 aa4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 hADV29S1A0JD25 119 aa4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 USP17L23D6RBM5 183 aa4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 ZNF73O43830 326 aaPredicted RBP4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 ELOF1P60002 83 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 PRR3P79522 188 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 TTC32Q5I0X7 151 aa4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 IMUPQ9GZP8 106 aa4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 APLNQ9ULZ1 77 aa4.37□□□□□ -1.71
CTNNA1-228ENST00000521640 CNBPP62633 177 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-228ENST00000521640 SERTAD4-AS1Q5TG53 156 aa4.36□□□□□ -1.71
CTNNA1-228ENST00000521640 Q6ZRP5 223 aa4.36□□□□□ -1.71
CTNNA1-228ENST00000521640 LINC00643Q86TS7 51 aa4.36□□□□□ -1.71
CTNNA1-228ENST00000521640 KCNQ1DNQ9H478 68 aa4.36□□□□□ -1.71
CTNNA1-228ENST00000521640 XAGE1AQ9HD64 81 aa4.36□□□□□ -1.71
CTNNA1-228ENST00000521640 TRBV7-7A0A0K0K1E9 115 aa4.35□□□□□ -1.71
CTNNA1-228ENST00000521640 LOC107984640A0A0U1RRK4 108 aa4.35□□□□□ -1.71
CTNNA1-228ENST00000521640 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
CTNNA1-228ENST00000521640 PDE6GP18545 87 aa4.35□□□□□ -1.71
CTNNA1-228ENST00000521640 COX7BP24311 80 aa4.35□□□□□ -1.71
CTNNA1-228ENST00000521640 C9orf129Q5T035 196 aaKnown RBP4.35□□□□□ -1.71
CTNNA1-228ENST00000521640 NOTCH1P46531 2555 aa4.34□□□□□ -1.71
CTNNA1-228ENST00000521640 LOC110117498A0A087WWA1 95 aa4.34□□□□□ -1.71
CTNNA1-228ENST00000521640 UBE2DNLQ8IWF7 75 aa4.34□□□□□ -1.71
CTNNA1-228ENST00000521640 NKAPP1Q8N9T2 125 aa4.34□□□□□ -1.71
CTNNA1-228ENST00000521640 NBEAL1Q6ZS30 2694 aa4.34□□□□□ -1.72
CTNNA1-228ENST00000521640 CCKP06307 115 aa4.33□□□□□ -1.72
CTNNA1-228ENST00000521640 SPRR1AP35321 89 aa4.33□□□□□ -1.72
CTNNA1-228ENST00000521640 GAGE2BQ13066 116 aa4.33□□□□□ -1.72
CTNNA1-228ENST00000521640 KRTAP21-3Q3LHN1 58 aa4.33□□□□□ -1.72
CTNNA1-228ENST00000521640 GAGE2EQ4V326 116 aa4.33□□□□□ -1.72
CTNNA1-228ENST00000521640 GAGE2DQ9UEU5 116 aa4.33□□□□□ -1.72
CTNNA1-228ENST00000521640 HUWE1Q7Z6Z7 4374 aaKnown RBP4.32□□□□□ -1.72
CTNNA1-228ENST00000521640 MGAM2Q2M2H8 2515 aa4.32□□□□□ -1.72
CTNNA1-228ENST00000521640 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
CTNNA1-228ENST00000521640 DHRS4-AS1Q9P1J3 65 aa4.32□□□□□ -1.72
CTNNA1-228ENST00000521640 A0A1B0GV72 72 aa4.31□□□□□ -1.72
CTNNA1-228ENST00000521640 C16orf90A8MZG2 172 aa4.31□□□□□ -1.72
CTNNA1-228ENST00000521640 RBM3P98179 157 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-228ENST00000521640 Q6JHZ5 121 aa4.31□□□□□ -1.72
CTNNA1-228ENST00000521640 GAGE2AQ6NT46 116 aa4.31□□□□□ -1.72
CTNNA1-228ENST00000521640 Q6ZQY7 126 aa4.31□□□□□ -1.72
CTNNA1-228ENST00000521640 C7orf33Q8WU49 177 aa4.31□□□□□ -1.72
CTNNA1-228ENST00000521640 KRTAP1-5Q9BYS1 174 aa4.31□□□□□ -1.72
CTNNA1-228ENST00000521640 C14orf132Q9NPU4 83 aa4.31□□□□□ -1.72
CTNNA1-228ENST00000521640 IGLV1-50A0A075B6I6 118 aa4.3□□□□□ -1.72
CTNNA1-228ENST00000521640 NBDYA0A0U1RRE5 68 aa4.3□□□□□ -1.72
CTNNA1-228ENST00000521640 KRTAP4-16G5E9R7 235 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-228ENST00000521640 PSCAO43653 123 aa4.3□□□□□ -1.72
CTNNA1-228ENST00000521640 CASC10Q5T4H9 136 aa4.3□□□□□ -1.72
CTNNA1-228ENST00000521640 Q6ZRX8 168 aa4.3□□□□□ -1.72
CTNNA1-228ENST00000521640 TRBV7-4A0A0J9YYF1 115 aa4.29□□□□□ -1.72
CTNNA1-228ENST00000521640 A0A1B0GW54 56 aa4.29□□□□□ -1.72
CTNNA1-228ENST00000521640 Q6ZQT0 140 aa4.29□□□□□ -1.72
CTNNA1-228ENST00000521640 MRPL55Q7Z7F7 128 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-228ENST00000521640 SMCR5Q8TEV8 140 aa4.29□□□□□ -1.72
CTNNA1-228ENST00000521640 DSCR8Q96T75 97 aa4.29□□□□□ -1.72
CTNNA1-228ENST00000521640 LINC00474Q9P2X8 69 aa4.29□□□□□ -1.72
CTNNA1-228ENST00000521640 LINC00846Q9NV44 126 aa4.28□□□□□ -1.72
CTNNA1-228ENST00000521640 LAMTOR3Q9UHA4 124 aa4.28□□□□□ -1.72
CTNNA1-228ENST00000521640 IGLV5-48A0A075B6I7 105 aa4.27□□□□□ -1.73
CTNNA1-228ENST00000521640 ETDCA0A1B0GVM5 59 aa4.27□□□□□ -1.73
CTNNA1-228ENST00000521640 LRCOL1A6NCL2 159 aa4.27□□□□□ -1.73
CTNNA1-228ENST00000521640 NDUFV3P56181 108 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-228ENST00000521640 Q6ZRN7 208 aaPredicted RBP4.27□□□□□ -1.73
CTNNA1-228ENST00000521640 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
CTNNA1-228ENST00000521640 C9orf163Q8N9P6 203 aa4.27□□□□□ -1.73
CTNNA1-228ENST00000521640 UBL5Q9BZL1 73 aa4.27□□□□□ -1.73
CTNNA1-228ENST00000521640 STAB2Q8WWQ8 2551 aa4.26□□□□□ -1.73
CTNNA1-228ENST00000521640 DNAH9Q9NYC9 4486 aa4.26□□□□□ -1.73
CTNNA1-228ENST00000521640 H0Y9J4 135 aa4.26□□□□□ -1.73
CTNNA1-228ENST00000521640 DNAH1Q9P2D7 4330 aa4.25□□□□□ -1.73
CTNNA1-228ENST00000521640 DYNC2H1Q8NCM8 4307 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-228ENST00000521640 A0A096LNI7 61 aa4.25□□□□□ -1.73
CTNNA1-228ENST00000521640 EPM2AB3EWF7 344 aa4.25□□□□□ -1.73
CTNNA1-228ENST00000521640 REG3GQ6UW15 175 aa4.25□□□□□ -1.73
CTNNA1-228ENST00000521640 ANAPC13Q9BS18 74 aa4.25□□□□□ -1.73
CTNNA1-228ENST00000521640 FAM168BA1KXE4 195 aa4.24□□□□□ -1.73
CTNNA1-228ENST00000521640 LINC01547P58512 204 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-228ENST00000521640 HIST1H4AP62805 103 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-228ENST00000521640 FAM19A5Q7Z5A7 132 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-228ENST00000521640 RPL37AP8A6NKH3 93 aa4.23□□□□□ -1.73
CTNNA1-228ENST00000521640 CXCL6P80162 114 aa4.23□□□□□ -1.73
CTNNA1-228ENST00000521640 Q6ZR54 194 aa4.23□□□□□ -1.73
CTNNA1-228ENST00000521640 Q8N377 158 aa4.23□□□□□ -1.73
CTNNA1-228ENST00000521640 Q9BRP9 147 aa4.23□□□□□ -1.73
CTNNA1-228ENST00000521640 FAM236AA0A1B0GUQ0 79 aa4.22□□□□□ -1.73
CTNNA1-228ENST00000521640 FAM236BA0A1B0GV22 79 aa4.22□□□□□ -1.73
CTNNA1-228ENST00000521640 ATOX1O00244 68 aa4.22□□□□□ -1.73
CTNNA1-228ENST00000521640 BCE1O60756 84 aa4.22□□□□□ -1.73
CTNNA1-228ENST00000521640 A0A1W2PNN7 141 aa4.21□□□□□ -1.74
CTNNA1-228ENST00000521640 Q6ZVQ6 151 aa4.21□□□□□ -1.74
CTNNA1-228ENST00000521640 COL7A1Q02388 2944 aa4.21□□□□□ -1.74
CTNNA1-228ENST00000521640 IGLV8-61A0A075B6I0 122 aa4.2□□□□□ -1.74
CTNNA1-228ENST00000521640 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.2□□□□□ -1.74
CTNNA1-228ENST00000521640 A0A087WTM6 91 aa4.2□□□□□ -1.74
CTNNA1-228ENST00000521640 SPRR1BP22528 89 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms