RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 HIST1H2BJP06899 126 aa14.72□□□□□ -0.05
LAPTM4B-203ENST00000521545 HIST1H2BOP23527 126 aa14.72□□□□□ -0.05
LAPTM4B-203ENST00000521545 HIST1H2BBP33778 126 aa14.72□□□□□ -0.05
LAPTM4B-203ENST00000521545 HIST1H2BDP58876 126 aa14.72□□□□□ -0.05
LAPTM4B-203ENST00000521545 HIST1H2BCP62807 126 aa14.72□□□□□ -0.05
LAPTM4B-203ENST00000521545 HIST2H2BEQ16778 126 aa14.72□□□□□ -0.05
LAPTM4B-203ENST00000521545 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.72□□□□□ -0.05
LAPTM4B-203ENST00000521545 HIST1H2BHQ93079 126 aa14.72□□□□□ -0.05
LAPTM4B-203ENST00000521545 HIST1H2BNQ99877 126 aa14.72□□□□□ -0.05
LAPTM4B-203ENST00000521545 HIST1H2BMQ99879 126 aa14.72□□□□□ -0.05
LAPTM4B-203ENST00000521545 ZNF73O43830 326 aaPredicted RBP14.71□□□□□ -0.05
LAPTM4B-203ENST00000521545 EIF4EBP3O60516 100 aaPredicted RBP14.71□□□□□ -0.05
LAPTM4B-203ENST00000521545 HINT1P49773 126 aaPredicted RBP14.7□□□□□ -0.06
LAPTM4B-203ENST00000521545 LINC01545Q5VT33 79 aa14.68□□□□□ -0.06
LAPTM4B-203ENST00000521545 PET117Q6UWS5 81 aa14.68□□□□□ -0.06
LAPTM4B-203ENST00000521545 TIMM17BO60830 172 aa14.66□□□□□ -0.06
LAPTM4B-203ENST00000521545 OR13C6PQ8NH95 151 aa14.66□□□□□ -0.06
LAPTM4B-203ENST00000521545 LINC00308Q8TCZ7 52 aa14.66□□□□□ -0.06
LAPTM4B-203ENST00000521545 SPANXCQ9NY87 97 aa14.66□□□□□ -0.06
LAPTM4B-203ENST00000521545 RPS29P62273 56 aaKnown RBP14.65□□□□□ -0.06
LAPTM4B-203ENST00000521545 LITAFQ99732 161 aa14.64□□□□□ -0.07
LAPTM4B-203ENST00000521545 ZNF815PA8K554 130 aa14.63□□□□□ -0.07
LAPTM4B-203ENST00000521545 C9orf153Q5TBE3 101 aa14.63□□□□□ -0.07
LAPTM4B-203ENST00000521545 C5orf52A6NGY3 159 aa14.62□□□□□ -0.07
LAPTM4B-203ENST00000521545 KRTAP13-3Q3SY46 172 aa14.62□□□□□ -0.07
LAPTM4B-203ENST00000521545 ST20-AS1Q8NBB2 130 aa14.6□□□□□ -0.07
LAPTM4B-203ENST00000521545 MUC17Q685J3 4493 aa14.59□□□□□ -0.07
LAPTM4B-203ENST00000521545 SLC25A20O43772 301 aa14.59□□□□□ -0.07
LAPTM4B-203ENST00000521545 Q8N377 158 aa14.59□□□□□ -0.07
LAPTM4B-203ENST00000521545 C3orf79P0CE67 100 aa14.58□□□□□ -0.08
LAPTM4B-203ENST00000521545 SPANXDQ9BXN6 97 aa14.57□□□□□ -0.08
LAPTM4B-203ENST00000521545 LINC00518Q8N0U6 118 aa14.56□□□□□ -0.08
LAPTM4B-203ENST00000521545 DHRS4-AS1Q9P1J3 65 aa14.56□□□□□ -0.08
LAPTM4B-203ENST00000521545 KRTDAPP60985 99 aa14.55□□□□□ -0.08
LAPTM4B-203ENST00000521545 TTTY13Q9BZ97 58 aa14.55□□□□□ -0.08
LAPTM4B-203ENST00000521545 SLC25A34Q6PIV7 304 aa14.53□□□□□ -0.08
LAPTM4B-203ENST00000521545 COA6Q5JTJ3 125 aaKnown RBP14.51□□□□□ -0.09
LAPTM4B-203ENST00000521545 SCGB1D4Q6XE38 83 aa14.51□□□□□ -0.09
LAPTM4B-203ENST00000521545 C20orf202A1L168 122 aa14.5□□□□□ -0.09
LAPTM4B-203ENST00000521545 COX7BP24311 80 aa14.5□□□□□ -0.09
LAPTM4B-203ENST00000521545 LCE2AQ5TA79 106 aaPredicted RBP14.5□□□□□ -0.09
LAPTM4B-203ENST00000521545 ASB16-AS1Q495Z4 193 aa14.49□□□□□ -0.09
LAPTM4B-203ENST00000521545 FAT4Q6V0I7 4981 aa14.48□□□□□ -0.09
LAPTM4B-203ENST00000521545 SPRR1BP22528 89 aa14.48□□□□□ -0.09
LAPTM4B-203ENST00000521545 COPS9Q8WXC6 57 aa14.48□□□□□ -0.09
LAPTM4B-203ENST00000521545 LAMTOR3Q9UHA4 124 aa14.48□□□□□ -0.09
LAPTM4B-203ENST00000521545 ELOF1P60002 83 aaKnown RBP14.47□□□□□ -0.09
LAPTM4B-203ENST00000521545 SEC61BP60468 96 aaKnown RBP14.47□□□□□ -0.09
LAPTM4B-203ENST00000521545 C6orf99Q4VX62 202 aa14.47□□□□□ -0.09
LAPTM4B-203ENST00000521545 TAL2Q16559 108 aa14.43□□□□□ -0.1
LAPTM4B-203ENST00000521545 IFITM1P13164 125 aa14.42□□□□□ -0.1
LAPTM4B-203ENST00000521545 ANKRD39Q53RE8 183 aa14.41□□□□□ -0.1
LAPTM4B-203ENST00000521545 LIMD2Q9BT23 127 aa14.41□□□□□ -0.1
LAPTM4B-203ENST00000521545 TRBV7-6A0A0J9YX20 115 aa14.4□□□□□ -0.1
LAPTM4B-203ENST00000521545 AKR1D1P51857 326 aa14.4□□□□□ -0.1
LAPTM4B-203ENST00000521545 HRCT1Q6UXD1 115 aa14.4□□□□□ -0.1
LAPTM4B-203ENST00000521545 Q6ZVH6 145 aa14.4□□□□□ -0.1
LAPTM4B-203ENST00000521545 ATOH7Q8N100 152 aa14.4□□□□□ -0.1
LAPTM4B-203ENST00000521545 DEFB105AQ8NG35 78 aa14.4□□□□□ -0.1
LAPTM4B-203ENST00000521545 A6NDN8 102 aa14.38□□□□□ -0.11
LAPTM4B-203ENST00000521545 TEX49A0A1B0GTD5 131 aa14.36□□□□□ -0.11
LAPTM4B-203ENST00000521545 A0A1B0GWB2 263 aa14.35□□□□□ -0.11
LAPTM4B-203ENST00000521545 Q1RN00 199 aa14.35□□□□□ -0.11
LAPTM4B-203ENST00000521545 MUSTN1Q8IVN3 82 aa14.35□□□□□ -0.11
LAPTM4B-203ENST00000521545 XP32Q5T750 250 aa14.34□□□□□ -0.11
LAPTM4B-203ENST00000521545 PCP2Q8IVA1 136 aa14.33□□□□□ -0.12
LAPTM4B-203ENST00000521545 PRO1933Q9H354 126 aa14.33□□□□□ -0.12
LAPTM4B-203ENST00000521545 KRTAP9-2Q9BYQ4 174 aa14.31□□□□□ -0.12
LAPTM4B-203ENST00000521545 SNRPEP62304 92 aaKnown RBP14.3□□□□□ -0.12
LAPTM4B-203ENST00000521545 CD164Q04900 197 aa14.3□□□□□ -0.12
LAPTM4B-203ENST00000521545 KRTAP4-1Q9BYQ7 146 aa14.29□□□□□ -0.12
LAPTM4B-203ENST00000521545 TRAV13-2A0A0B4J235 113 aa14.28□□□□□ -0.12
LAPTM4B-203ENST00000521545 A4D1N5 150 aa14.28□□□□□ -0.12
LAPTM4B-203ENST00000521545 H7C2G1 150 aa14.27□□□□□ -0.13
LAPTM4B-203ENST00000521545 LINC01547P58512 204 aaPredicted RBP14.27□□□□□ -0.13
LAPTM4B-203ENST00000521545 NHP2Q9NX24 153 aaKnown RBP14.25□□□□□ -0.13
LAPTM4B-203ENST00000521545 SMIM29Q86T20 159 aa14.24□□□□□ -0.13
LAPTM4B-203ENST00000521545 IGLV5-48A0A075B6I7 105 aa14.23□□□□□ -0.13
LAPTM4B-203ENST00000521545 SMIM11BQ8TCY0 68 aa14.22□□□□□ -0.13
LAPTM4B-203ENST00000521545 S100A2P29034 98 aa14.21□□□□□ -0.13
LAPTM4B-203ENST00000521545 C9orf92A6NGG3 77 aa14.2□□□□□ -0.14
LAPTM4B-203ENST00000521545 HSBP1L1C9JCN9 74 aa14.19□□□□□ -0.14
LAPTM4B-203ENST00000521545 VAMP3Q15836 100 aa14.18□□□□□ -0.14
LAPTM4B-203ENST00000521545 Q5XG85 94 aa14.17□□□□□ -0.14
LAPTM4B-203ENST00000521545 HIST3H2BBQ8N257 126 aa14.17□□□□□ -0.14
LAPTM4B-203ENST00000521545 HIST1H2BLQ99880 126 aa14.16□□□□□ -0.14
LAPTM4B-203ENST00000521545 A0A0G2JQZ4 141 aa14.12□□□□□ -0.15
LAPTM4B-203ENST00000521545 PCOTHQ58A44 107 aa14.11□□□□□ -0.15
LAPTM4B-203ENST00000521545 C1orf195Q5TG92 126 aa14.11□□□□□ -0.15
LAPTM4B-203ENST00000521545 F8WEM9 126 aa14.1□□□□□ -0.15
LAPTM4B-203ENST00000521545 S100A6P06703 90 aa14.08□□□□□ -0.16
LAPTM4B-203ENST00000521545 LINC00575Q6W349 94 aa14.08□□□□□ -0.16
LAPTM4B-203ENST00000521545 IGLV8-61A0A075B6I0 122 aa14.06□□□□□ -0.16
LAPTM4B-203ENST00000521545 TCL1BO95988 128 aa14.06□□□□□ -0.16
LAPTM4B-203ENST00000521545 hADV29S1A0JD25 119 aa14.05□□□□□ -0.16
LAPTM4B-203ENST00000521545 S100A1P23297 94 aa14.03□□□□□ -0.16
LAPTM4B-203ENST00000521545 Q6ZQY7 126 aa14.03□□□□□ -0.16
LAPTM4B-203ENST00000521545 SCGB1D1O95968 90 aa14□□□□□ -0.17
LAPTM4B-203ENST00000521545 HIST1H4GQ99525 98 aa13.99□□□□□ -0.17
LAPTM4B-203ENST00000521545 Q6JHZ5 121 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms