RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 HIST2H2BEQ16778 126 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.12□□□□□ -0.63
CERNA3-201ENST00000521403 SSBP3-AS1Q7Z2R9 100 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 HIST1H2BHQ93079 126 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 HIST1H2BNQ99877 126 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 HIST1H2BMQ99879 126 aa11.12□□□□□ -0.63
CERNA3-201ENST00000521403 TRAV23DV6A0A075B6W5 121 aa11.11□□□□□ -0.63
CERNA3-201ENST00000521403 IGLV6-57P01721 117 aa11.11□□□□□ -0.63
CERNA3-201ENST00000521403 JOSD1Q15040 202 aaPredicted RBP11.09□□□□□ -0.63
CERNA3-201ENST00000521403 RPS29P62273 56 aaKnown RBP11.08□□□□□ -0.64
CERNA3-201ENST00000521403 C9orf153Q5TBE3 101 aa11.08□□□□□ -0.64
CERNA3-201ENST00000521403 SOSTDC1Q6X4U4 206 aa11.08□□□□□ -0.64
CERNA3-201ENST00000521403 Q8N377 158 aa11.08□□□□□ -0.64
CERNA3-201ENST00000521403 A0A0J9YXY3 114 aa11.07□□□□□ -0.64
CERNA3-201ENST00000521403 EIF4EBP3O60516 100 aaPredicted RBP11.07□□□□□ -0.64
CERNA3-201ENST00000521403 ASB16-AS1Q495Z4 193 aa11.07□□□□□ -0.64
CERNA3-201ENST00000521403 ADAMTSL4-AS1Q5T5F5 129 aa11.07□□□□□ -0.64
CERNA3-201ENST00000521403 SLC25A20O43772 301 aa11.06□□□□□ -0.64
CERNA3-201ENST00000521403 ZNF73O43830 326 aaPredicted RBP11.06□□□□□ -0.64
CERNA3-201ENST00000521403 E9PLD3 99 aa11.04□□□□□ -0.64
CERNA3-201ENST00000521403 ST20-AS1Q8NBB2 130 aa11.04□□□□□ -0.64
CERNA3-201ENST00000521403 SEC61BP60468 96 aaKnown RBP11.03□□□□□ -0.64
CERNA3-201ENST00000521403 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.65
CERNA3-201ENST00000521403 HINT1P49773 126 aaPredicted RBP11.02□□□□□ -0.65
CERNA3-201ENST00000521403 OR13C6PQ8NH95 151 aa11□□□□□ -0.65
CERNA3-201ENST00000521403 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
CERNA3-201ENST00000521403 KRTAP4-1Q9BYQ7 146 aa10.98□□□□□ -0.65
CERNA3-201ENST00000521403 SPANXCQ9NY87 97 aa10.98□□□□□ -0.65
CERNA3-201ENST00000521403 LINC00308Q8TCZ7 52 aa10.97□□□□□ -0.65
CERNA3-201ENST00000521403 LINC01547P58512 204 aaPredicted RBP10.96□□□□□ -0.65
CERNA3-201ENST00000521403 LINC01545Q5VT33 79 aa10.96□□□□□ -0.65
CERNA3-201ENST00000521403 LITAFQ99732 161 aa10.96□□□□□ -0.65
CERNA3-201ENST00000521403 C5orf52A6NGY3 159 aa10.95□□□□□ -0.66
CERNA3-201ENST00000521403 C3orf79P0CE67 100 aa10.95□□□□□ -0.66
CERNA3-201ENST00000521403 COA6Q5JTJ3 125 aaKnown RBP10.94□□□□□ -0.66
CERNA3-201ENST00000521403 ZNF815PA8K554 130 aa10.93□□□□□ -0.66
CERNA3-201ENST00000521403 TIMM17BO60830 172 aa10.93□□□□□ -0.66
CERNA3-201ENST00000521403 XP32Q5T750 250 aa10.93□□□□□ -0.66
CERNA3-201ENST00000521403 PET117Q6UWS5 81 aa10.93□□□□□ -0.66
CERNA3-201ENST00000521403 HRCT1Q6UXD1 115 aa10.93□□□□□ -0.66
CERNA3-201ENST00000521403 SLC25A34Q6PIV7 304 aa10.92□□□□□ -0.66
CERNA3-201ENST00000521403 SPANXDQ9BXN6 97 aa10.92□□□□□ -0.66
CERNA3-201ENST00000521403 DHRS4-AS1Q9P1J3 65 aa10.92□□□□□ -0.66
CERNA3-201ENST00000521403 TTTY13Q9BZ97 58 aa10.91□□□□□ -0.66
CERNA3-201ENST00000521403 SPRR1BP22528 89 aa10.9□□□□□ -0.66
CERNA3-201ENST00000521403 KRTDAPP60985 99 aa10.9□□□□□ -0.66
CERNA3-201ENST00000521403 LIMD2Q9BT23 127 aa10.89□□□□□ -0.67
CERNA3-201ENST00000521403 LAMTOR3Q9UHA4 124 aa10.89□□□□□ -0.67
CERNA3-201ENST00000521403 COX7BP24311 80 aa10.88□□□□□ -0.67
CERNA3-201ENST00000521403 C6orf99Q4VX62 202 aa10.87□□□□□ -0.67
CERNA3-201ENST00000521403 KRTAP9-6A0A140TA67 174 aa10.86□□□□□ -0.67
CERNA3-201ENST00000521403 ELOF1P60002 83 aaKnown RBP10.86□□□□□ -0.67
CERNA3-201ENST00000521403 LINC00518Q8N0U6 118 aa10.86□□□□□ -0.67
CERNA3-201ENST00000521403 DEFB105AQ8NG35 78 aa10.86□□□□□ -0.67
CERNA3-201ENST00000521403 TAL2Q16559 108 aa10.85□□□□□ -0.67
CERNA3-201ENST00000521403 Q1RN00 199 aa10.84□□□□□ -0.67
CERNA3-201ENST00000521403 ATOH7Q8N100 152 aa10.84□□□□□ -0.67
CERNA3-201ENST00000521403 SCGB1D4Q6XE38 83 aa10.83□□□□□ -0.68
CERNA3-201ENST00000521403 C9orf92A6NGG3 77 aa10.82□□□□□ -0.68
CERNA3-201ENST00000521403 ANKRD39Q53RE8 183 aa10.82□□□□□ -0.68
CERNA3-201ENST00000521403 TEX49A0A1B0GTD5 131 aa10.79□□□□□ -0.68
CERNA3-201ENST00000521403 PRO1933Q9H354 126 aa10.79□□□□□ -0.68
CERNA3-201ENST00000521403 H7C2G1 150 aa10.78□□□□□ -0.68
CERNA3-201ENST00000521403 PCOTHQ58A44 107 aa10.78□□□□□ -0.68
CERNA3-201ENST00000521403 A6NDN8 102 aa10.77□□□□□ -0.69
CERNA3-201ENST00000521403 S100A1P23297 94 aa10.77□□□□□ -0.69
CERNA3-201ENST00000521403 COPS9Q8WXC6 57 aa10.77□□□□□ -0.69
CERNA3-201ENST00000521403 TRBV7-6A0A0J9YX20 115 aa10.76□□□□□ -0.69
CERNA3-201ENST00000521403 C20orf202A1L168 122 aa10.76□□□□□ -0.69
CERNA3-201ENST00000521403 CD164Q04900 197 aa10.76□□□□□ -0.69
CERNA3-201ENST00000521403 HIST3H2BBQ8N257 126 aa10.76□□□□□ -0.69
CERNA3-201ENST00000521403 A0A1B0GWB2 263 aa10.75□□□□□ -0.69
CERNA3-201ENST00000521403 IGLV8-61A0A075B6I0 122 aa10.74□□□□□ -0.69
CERNA3-201ENST00000521403 PCP2Q8IVA1 136 aa10.74□□□□□ -0.69
CERNA3-201ENST00000521403 HIST1H2BLQ99880 126 aa10.74□□□□□ -0.69
CERNA3-201ENST00000521403 IFITM1P13164 125 aa10.73□□□□□ -0.69
CERNA3-201ENST00000521403 AKR1D1P51857 326 aa10.73□□□□□ -0.69
CERNA3-201ENST00000521403 LCE2CQ5TA81 110 aa10.72□□□□□ -0.69
CERNA3-201ENST00000521403 SMIM29Q86T20 159 aa10.72□□□□□ -0.69
CERNA3-201ENST00000521403 A0A0G2JQZ4 141 aa10.71□□□□□ -0.69
CERNA3-201ENST00000521403 MUSTN1Q8IVN3 82 aa10.71□□□□□ -0.69
CERNA3-201ENST00000521403 IGLV5-48A0A075B6I7 105 aa10.7□□□□□ -0.7
CERNA3-201ENST00000521403 Q6ZVH6 145 aa10.7□□□□□ -0.7
CERNA3-201ENST00000521403 S100A2P29034 98 aa10.68□□□□□ -0.7
CERNA3-201ENST00000521403 LCE2DQ5TA82 110 aaPredicted RBP10.68□□□□□ -0.7
CERNA3-201ENST00000521403 Q5XG85 94 aa10.68□□□□□ -0.7
CERNA3-201ENST00000521403 A4D1N5 150 aa10.67□□□□□ -0.7
CERNA3-201ENST00000521403 KRTAP19-2Q3LHN2 52 aa10.67□□□□□ -0.7
CERNA3-201ENST00000521403 C1orf195Q5TG92 126 aa10.67□□□□□ -0.7
CERNA3-201ENST00000521403 TRAV13-2A0A0B4J235 113 aa10.66□□□□□ -0.7
CERNA3-201ENST00000521403 SMIM11BQ8TCY0 68 aa10.66□□□□□ -0.7
CERNA3-201ENST00000521403 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
CERNA3-201ENST00000521403 FSIP2Q5CZC0 6907 aa10.63□□□□□ -0.71
CERNA3-201ENST00000521403 S100A6P06703 90 aa10.63□□□□□ -0.71
CERNA3-201ENST00000521403 SNRPEP62304 92 aaKnown RBP10.63□□□□□ -0.71
CERNA3-201ENST00000521403 MT1HP80294 61 aa10.62□□□□□ -0.71
CERNA3-201ENST00000521403 F8WEM9 126 aa10.59□□□□□ -0.71
CERNA3-201ENST00000521403 TCL1BO95988 128 aa10.59□□□□□ -0.71
CERNA3-201ENST00000521403 RPL37P61927 97 aaKnown RBP10.58□□□□□ -0.72
CERNA3-201ENST00000521403 VAMP3Q15836 100 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms