RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 SSBP3-AS1Q7Z2R9 100 aa11.67□□□□□ -0.54
SNHG6-203ENST00000520944 CBY1Q9Y3M2 126 aa11.67□□□□□ -0.54
SNHG6-203ENST00000520944 SOSTDC1Q6X4U4 206 aa11.66□□□□□ -0.54
SNHG6-203ENST00000520944 FAT4Q6V0I7 4981 aa11.66□□□□□ -0.54
SNHG6-203ENST00000520944 ZNF73O43830 326 aaPredicted RBP11.65□□□□□ -0.54
SNHG6-203ENST00000520944 HINT1P49773 126 aaPredicted RBP11.65□□□□□ -0.54
SNHG6-203ENST00000520944 EIF4EBP3O60516 100 aaPredicted RBP11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST1H2BKO60814 126 aa11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST1H2BJP06899 126 aa11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST1H2BOP23527 126 aa11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST1H2BBP33778 126 aa11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST1H2BDP58876 126 aa11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST1H2BCP62807 126 aa11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST2H2BEQ16778 126 aa11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST1H2BHQ93079 126 aa11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST1H2BNQ99877 126 aa11.64□□□□□ -0.55
SNHG6-203ENST00000520944 HIST1H2BMQ99879 126 aa11.64□□□□□ -0.55
SNHG6-203ENST00000520944 LINC01545Q5VT33 79 aa11.61□□□□□ -0.55
SNHG6-203ENST00000520944 PET117Q6UWS5 81 aa11.61□□□□□ -0.55
SNHG6-203ENST00000520944 OR13C6PQ8NH95 151 aa11.61□□□□□ -0.55
SNHG6-203ENST00000520944 SPANXCQ9NY87 97 aa11.61□□□□□ -0.55
SNHG6-203ENST00000520944 LINC00308Q8TCZ7 52 aa11.6□□□□□ -0.55
SNHG6-203ENST00000520944 TIMM17BO60830 172 aa11.59□□□□□ -0.55
SNHG6-203ENST00000520944 RPS29P62273 56 aaKnown RBP11.59□□□□□ -0.55
SNHG6-203ENST00000520944 C9orf153Q5TBE3 101 aa11.59□□□□□ -0.55
SNHG6-203ENST00000520944 ZNF815PA8K554 130 aa11.58□□□□□ -0.56
SNHG6-203ENST00000520944 C5orf52A6NGY3 159 aa11.57□□□□□ -0.56
SNHG6-203ENST00000520944 KRTAP13-3Q3SY46 172 aa11.57□□□□□ -0.56
SNHG6-203ENST00000520944 LITAFQ99732 161 aa11.57□□□□□ -0.56
SNHG6-203ENST00000520944 SLC25A20O43772 301 aa11.56□□□□□ -0.56
SNHG6-203ENST00000520944 ST20-AS1Q8NBB2 130 aa11.56□□□□□ -0.56
SNHG6-203ENST00000520944 Q8N377 158 aa11.55□□□□□ -0.56
SNHG6-203ENST00000520944 C3orf79P0CE67 100 aa11.53□□□□□ -0.56
SNHG6-203ENST00000520944 LINC00518Q8N0U6 118 aa11.53□□□□□ -0.56
SNHG6-203ENST00000520944 SPANXDQ9BXN6 97 aa11.53□□□□□ -0.56
SNHG6-203ENST00000520944 DHRS4-AS1Q9P1J3 65 aa11.53□□□□□ -0.56
SNHG6-203ENST00000520944 KRTDAPP60985 99 aa11.51□□□□□ -0.57
SNHG6-203ENST00000520944 SLC25A34Q6PIV7 304 aa11.51□□□□□ -0.57
SNHG6-203ENST00000520944 TTTY13Q9BZ97 58 aa11.51□□□□□ -0.57
SNHG6-203ENST00000520944 SCGB1D4Q6XE38 83 aa11.49□□□□□ -0.57
SNHG6-203ENST00000520944 C20orf202A1L168 122 aa11.48□□□□□ -0.57
SNHG6-203ENST00000520944 COX7BP24311 80 aa11.47□□□□□ -0.57
SNHG6-203ENST00000520944 ASB16-AS1Q495Z4 193 aa11.47□□□□□ -0.57
SNHG6-203ENST00000520944 COA6Q5JTJ3 125 aaKnown RBP11.47□□□□□ -0.57
SNHG6-203ENST00000520944 LCE2AQ5TA79 106 aaPredicted RBP11.47□□□□□ -0.57
SNHG6-203ENST00000520944 COPS9Q8WXC6 57 aa11.47□□□□□ -0.57
SNHG6-203ENST00000520944 SPRR1BP22528 89 aa11.46□□□□□ -0.57
SNHG6-203ENST00000520944 SEC61BP60468 96 aaKnown RBP11.46□□□□□ -0.57
SNHG6-203ENST00000520944 LAMTOR3Q9UHA4 124 aa11.46□□□□□ -0.57
SNHG6-203ENST00000520944 C6orf99Q4VX62 202 aa11.45□□□□□ -0.58
SNHG6-203ENST00000520944 ELOF1P60002 83 aaKnown RBP11.44□□□□□ -0.58
SNHG6-203ENST00000520944 TAL2Q16559 108 aa11.43□□□□□ -0.58
SNHG6-203ENST00000520944 IFITM1P13164 125 aa11.41□□□□□ -0.58
SNHG6-203ENST00000520944 HRCT1Q6UXD1 115 aa11.41□□□□□ -0.58
SNHG6-203ENST00000520944 DEFB105AQ8NG35 78 aa11.41□□□□□ -0.58
SNHG6-203ENST00000520944 LIMD2Q9BT23 127 aa11.41□□□□□ -0.58
SNHG6-203ENST00000520944 AKR1D1P51857 326 aa11.4□□□□□ -0.58
SNHG6-203ENST00000520944 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.58
SNHG6-203ENST00000520944 Q6ZVH6 145 aa11.4□□□□□ -0.58
SNHG6-203ENST00000520944 TRBV7-6A0A0J9YX20 115 aa11.39□□□□□ -0.59
SNHG6-203ENST00000520944 A6NDN8 102 aa11.39□□□□□ -0.59
SNHG6-203ENST00000520944 ATOH7Q8N100 152 aa11.39□□□□□ -0.59
SNHG6-203ENST00000520944 TEX49A0A1B0GTD5 131 aa11.37□□□□□ -0.59
SNHG6-203ENST00000520944 A0A1B0GWB2 263 aa11.36□□□□□ -0.59
SNHG6-203ENST00000520944 Q1RN00 199 aa11.36□□□□□ -0.59
SNHG6-203ENST00000520944 XP32Q5T750 250 aa11.36□□□□□ -0.59
SNHG6-203ENST00000520944 MUSTN1Q8IVN3 82 aa11.36□□□□□ -0.59
SNHG6-203ENST00000520944 PRO1933Q9H354 126 aa11.35□□□□□ -0.59
SNHG6-203ENST00000520944 PCP2Q8IVA1 136 aa11.34□□□□□ -0.59
SNHG6-203ENST00000520944 KRTAP9-2Q9BYQ4 174 aa11.33□□□□□ -0.6
SNHG6-203ENST00000520944 SNRPEP62304 92 aaKnown RBP11.32□□□□□ -0.6
SNHG6-203ENST00000520944 CD164Q04900 197 aa11.32□□□□□ -0.6
SNHG6-203ENST00000520944 TRAV13-2A0A0B4J235 113 aa11.31□□□□□ -0.6
SNHG6-203ENST00000520944 A4D1N5 150 aa11.31□□□□□ -0.6
SNHG6-203ENST00000520944 H7C2G1 150 aa11.3□□□□□ -0.6
SNHG6-203ENST00000520944 LINC01547P58512 204 aaPredicted RBP11.3□□□□□ -0.6
SNHG6-203ENST00000520944 KRTAP4-1Q9BYQ7 146 aa11.3□□□□□ -0.6
SNHG6-203ENST00000520944 NHP2Q9NX24 153 aaKnown RBP11.28□□□□□ -0.6
SNHG6-203ENST00000520944 IGLV5-48A0A075B6I7 105 aa11.26□□□□□ -0.61
SNHG6-203ENST00000520944 SMIM29Q86T20 159 aa11.26□□□□□ -0.61
SNHG6-203ENST00000520944 S100A2P29034 98 aa11.25□□□□□ -0.61
SNHG6-203ENST00000520944 SMIM11BQ8TCY0 68 aa11.25□□□□□ -0.61
SNHG6-203ENST00000520944 C9orf92A6NGG3 77 aa11.24□□□□□ -0.61
SNHG6-203ENST00000520944 HSBP1L1C9JCN9 74 aa11.24□□□□□ -0.61
SNHG6-203ENST00000520944 VAMP3Q15836 100 aa11.24□□□□□ -0.61
SNHG6-203ENST00000520944 Q5XG85 94 aa11.21□□□□□ -0.61
SNHG6-203ENST00000520944 HIST3H2BBQ8N257 126 aa11.21□□□□□ -0.61
SNHG6-203ENST00000520944 HIST1H2BLQ99880 126 aa11.2□□□□□ -0.62
SNHG6-203ENST00000520944 A0A0G2JQZ4 141 aa11.17□□□□□ -0.62
SNHG6-203ENST00000520944 PCOTHQ58A44 107 aa11.17□□□□□ -0.62
SNHG6-203ENST00000520944 F8WEM9 126 aa11.16□□□□□ -0.62
SNHG6-203ENST00000520944 C1orf195Q5TG92 126 aa11.16□□□□□ -0.62
SNHG6-203ENST00000520944 S100A6P06703 90 aa11.15□□□□□ -0.62
SNHG6-203ENST00000520944 IGLV8-61A0A075B6I0 122 aa11.14□□□□□ -0.63
SNHG6-203ENST00000520944 TCL1BO95988 128 aa11.14□□□□□ -0.63
SNHG6-203ENST00000520944 LINC00575Q6W349 94 aa11.14□□□□□ -0.63
SNHG6-203ENST00000520944 hADV29S1A0JD25 119 aa11.13□□□□□ -0.63
SNHG6-203ENST00000520944 Q6ZQY7 126 aa11.1□□□□□ -0.63
SNHG6-203ENST00000520944 S100A1P23297 94 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms