RNA–Protein interactions for RNA: ENST00000520229.1

PDGFRB-206, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-206ENST00000520229 SPRR4Q96PI1 79 aa9.08□□□□□ -0.96
PDGFRB-206ENST00000520229 SPANXCQ9NY87 97 aa9.08□□□□□ -0.96
PDGFRB-206ENST00000520229 TRAV23DV6A0A075B6W5 121 aa9.07□□□□□ -0.96
PDGFRB-206ENST00000520229 B5MCH6 92 aa9.07□□□□□ -0.96
PDGFRB-206ENST00000520229 TSPAN13O95857 204 aa9.07□□□□□ -0.96
PDGFRB-206ENST00000520229 SMCR5Q8TEV8 140 aa9.07□□□□□ -0.96
PDGFRB-206ENST00000520229 HIST1H2BLQ99880 126 aa9.07□□□□□ -0.96
PDGFRB-206ENST00000520229 CBY1Q9Y3M2 126 aa9.05□□□□□ -0.96
PDGFRB-206ENST00000520229 SNRPEP62304 92 aaKnown RBP9.04□□□□□ -0.96
PDGFRB-206ENST00000520229 LINC00304Q8N9R0 145 aa9.04□□□□□ -0.96
PDGFRB-206ENST00000520229 OR13C6PQ8NH95 151 aa9.04□□□□□ -0.96
PDGFRB-206ENST00000520229 SPANXDQ9BXN6 97 aa9.04□□□□□ -0.96
PDGFRB-206ENST00000520229 ZNF73O43830 326 aaPredicted RBP9.03□□□□□ -0.96
PDGFRB-206ENST00000520229 PRR4Q16378 134 aa9.03□□□□□ -0.96
PDGFRB-206ENST00000520229 Q6ZRX8 168 aa9.03□□□□□ -0.96
PDGFRB-206ENST00000520229 C3orf22Q8N5N4 141 aa9.03□□□□□ -0.96
PDGFRB-206ENST00000520229 JOSD1Q15040 202 aaPredicted RBP9.02□□□□□ -0.97
PDGFRB-206ENST00000520229 PCP2Q8IVA1 136 aa9.02□□□□□ -0.97
PDGFRB-206ENST00000520229 COPS9Q8WXC6 57 aa9.02□□□□□ -0.97
PDGFRB-206ENST00000520229 PPDPFQ9H3Y8 114 aa9.02□□□□□ -0.97
PDGFRB-206ENST00000520229 HINT1P49773 126 aaPredicted RBP9.01□□□□□ -0.97
PDGFRB-206ENST00000520229 Q9BRP9 147 aa9.01□□□□□ -0.97
PDGFRB-206ENST00000520229 HSBP1L1C9JCN9 74 aa9□□□□□ -0.97
PDGFRB-206ENST00000520229 ERC2-IT1O76042 136 aa9□□□□□ -0.97
PDGFRB-206ENST00000520229 LINC00518Q8N0U6 118 aa9□□□□□ -0.97
PDGFRB-206ENST00000520229 IFITM1P13164 125 aa8.99□□□□□ -0.97
PDGFRB-206ENST00000520229 GAGE2AQ6NT46 116 aa8.99□□□□□ -0.97
PDGFRB-206ENST00000520229 LINC00483Q53H64 154 aa8.98□□□□□ -0.97
PDGFRB-206ENST00000520229 Q6ZVH6 145 aa8.98□□□□□ -0.97
PDGFRB-206ENST00000520229 MUC2Q02817 5179 aa8.97□□□□□ -0.97
PDGFRB-206ENST00000520229 MUSTN1Q8IVN3 82 aa8.95□□□□□ -0.98
PDGFRB-206ENST00000520229 C5orf52A6NGY3 159 aa8.94□□□□□ -0.98
PDGFRB-206ENST00000520229 SCGB1D1O95968 90 aa8.94□□□□□ -0.98
PDGFRB-206ENST00000520229 CTAG1AP78358 180 aa8.94□□□□□ -0.98
PDGFRB-206ENST00000520229 C4orf48Q5BLP8 95 aa8.94□□□□□ -0.98
PDGFRB-206ENST00000520229 SPAG11AQ6PDA7 123 aa8.94□□□□□ -0.98
PDGFRB-206ENST00000520229 IGLV9-49A0A0B4J1Y8 123 aa8.93□□□□□ -0.98
PDGFRB-206ENST00000520229 Q8NBF4 154 aa8.93□□□□□ -0.98
PDGFRB-206ENST00000520229 A6NDN8 102 aa8.92□□□□□ -0.98
PDGFRB-206ENST00000520229 COX7BP24311 80 aa8.92□□□□□ -0.98
PDGFRB-206ENST00000520229 MOBPQ13875 183 aa8.92□□□□□ -0.98
PDGFRB-206ENST00000520229 C6orf99Q4VX62 202 aa8.92□□□□□ -0.98
PDGFRB-206ENST00000520229 RETNLBQ9BQ08 111 aa8.92□□□□□ -0.98
PDGFRB-206ENST00000520229 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
PDGFRB-206ENST00000520229 ST20-AS1Q8NBB2 130 aa8.91□□□□□ -0.98
PDGFRB-206ENST00000520229 ELOF1P60002 83 aaKnown RBP8.9□□□□□ -0.98
PDGFRB-206ENST00000520229 TRAV13-2A0A0B4J235 113 aa8.89□□□□□ -0.99
PDGFRB-206ENST00000520229 C9orf153Q5TBE3 101 aa8.88□□□□□ -0.99
PDGFRB-206ENST00000520229 SSBP3-AS1Q7Z2R9 100 aa8.88□□□□□ -0.99
PDGFRB-206ENST00000520229 TRBV7-6A0A0J9YX20 115 aa8.87□□□□□ -0.99
PDGFRB-206ENST00000520229 A0A1B0GWB2 263 aa8.85□□□□□ -0.99
PDGFRB-206ENST00000520229 SPINK1P00995 79 aa8.85□□□□□ -0.99
PDGFRB-206ENST00000520229 SLC25A34Q6PIV7 304 aa8.85□□□□□ -0.99
PDGFRB-206ENST00000520229 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
PDGFRB-206ENST00000520229 COX8AP10176 69 aa8.84□□□□□ -0.99
PDGFRB-206ENST00000520229 IGLV7-46A0A075B6I9 117 aa8.83□□□□□ -1
PDGFRB-206ENST00000520229 A4D1N5 150 aa8.83□□□□□ -1
PDGFRB-206ENST00000520229 SPRR1BP22528 89 aa8.83□□□□□ -1
PDGFRB-206ENST00000520229 SMIM11BQ8TCY0 68 aa8.83□□□□□ -1
PDGFRB-206ENST00000520229 TAL2Q16559 108 aa8.82□□□□□ -1
PDGFRB-206ENST00000520229 HIST1H4GQ99525 98 aa8.82□□□□□ -1
PDGFRB-206ENST00000520229 DEFB105AQ8NG35 78 aa8.81□□□□□ -1
PDGFRB-206ENST00000520229 LAMTOR3Q9UHA4 124 aa8.81□□□□□ -1
PDGFRB-206ENST00000520229 DLEU1O43261 78 aa8.8□□□□□ -1
PDGFRB-206ENST00000520229 PAM16Q9Y3D7 125 aa8.8□□□□□ -1
PDGFRB-206ENST00000520229 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
PDGFRB-206ENST00000520229 SPATA45Q537H7 98 aa8.79□□□□□ -1
PDGFRB-206ENST00000520229 FP248Q71RG6 208 aaPredicted RBP8.79□□□□□ -1
PDGFRB-206ENST00000520229 C14orf144Q96I85 54 aa8.79□□□□□ -1
PDGFRB-206ENST00000520229 VAMP8Q9BV40 100 aa8.79□□□□□ -1
PDGFRB-206ENST00000520229 NHP2Q9NX24 153 aaKnown RBP8.79□□□□□ -1
PDGFRB-206ENST00000520229 TEX49A0A1B0GTD5 131 aa8.78□□□□□ -1
PDGFRB-206ENST00000520229 VAMP3Q15836 100 aa8.78□□□□□ -1
PDGFRB-206ENST00000520229 TPRXLQ17RH7 258 aa8.78□□□□□ -1
PDGFRB-206ENST00000520229 Q1RN00 199 aa8.77□□□□□ -1.01
PDGFRB-206ENST00000520229 C12orf57Q99622 126 aa8.77□□□□□ -1.01
PDGFRB-206ENST00000520229 CDIP1Q9H305 208 aa8.77□□□□□ -1.01
PDGFRB-206ENST00000520229 FAT4Q6V0I7 4981 aa8.77□□□□□ -1.01
PDGFRB-206ENST00000520229 SLC25A20O43772 301 aa8.76□□□□□ -1.01
PDGFRB-206ENST00000520229 Q8N377 158 aa8.75□□□□□ -1.01
PDGFRB-206ENST00000520229 IGLV5-48A0A075B6I7 105 aa8.74□□□□□ -1.01
PDGFRB-206ENST00000520229 LINC01547P58512 204 aaPredicted RBP8.73□□□□□ -1.01
PDGFRB-206ENST00000520229 HIGD1BQ9P298 99 aa8.73□□□□□ -1.01
PDGFRB-206ENST00000520229 HRCT1Q6UXD1 115 aa8.72□□□□□ -1.01
PDGFRB-206ENST00000520229 LINC00575Q6W349 94 aa8.72□□□□□ -1.01
PDGFRB-206ENST00000520229 SMIM29Q86T20 159 aa8.71□□□□□ -1.02
PDGFRB-206ENST00000520229 PRO1933Q9H354 126 aa8.71□□□□□ -1.02
PDGFRB-206ENST00000520229 TMA7Q9Y2S6 64 aaKnown RBP8.71□□□□□ -1.02
PDGFRB-206ENST00000520229 C2orf91Q6ZV80 131 aa8.7□□□□□ -1.02
PDGFRB-206ENST00000520229 RAB37Q96AX2 223 aa8.7□□□□□ -1.02
PDGFRB-206ENST00000520229 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
PDGFRB-206ENST00000520229 hADV29S1A0JD25 119 aa8.69□□□□□ -1.02
PDGFRB-206ENST00000520229 H7C2G1 150 aa8.69□□□□□ -1.02
PDGFRB-206ENST00000520229 BVES-AS1Q5T3Y7 98 aa8.69□□□□□ -1.02
PDGFRB-206ENST00000520229 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
PDGFRB-206ENST00000520229 CFC1P0CG37 223 aa8.68□□□□□ -1.02
PDGFRB-206ENST00000520229 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
PDGFRB-206ENST00000520229 PYY3Q5JQD4 70 aa8.67□□□□□ -1.02
PDGFRB-206ENST00000520229 Q6ZQY7 126 aa8.67□□□□□ -1.02
PDGFRB-206ENST00000520229 A0A0B4J2C4 111 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms