RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 C7orf33Q8WU49 177 aa13.55□□□□□ -0.24
PTP4A3-203ENST00000520105 LRP1BQ9NZR2 4599 aa13.55□□□□□ -0.24
PTP4A3-203ENST00000520105 S100A7L2Q5SY68 101 aa13.55□□□□□ -0.24
PTP4A3-203ENST00000520105 TEN1Q86WV5 123 aa13.55□□□□□ -0.24
PTP4A3-203ENST00000520105 TRBV10-3A0A0K0K1G6 114 aa13.53□□□□□ -0.24
PTP4A3-203ENST00000520105 MRPL55Q7Z7F7 128 aaKnown RBP13.53□□□□□ -0.24
PTP4A3-203ENST00000520105 LINC00167Q96N53 147 aa13.53□□□□□ -0.24
PTP4A3-203ENST00000520105 Q6ZSA8 131 aa13.53□□□□□ -0.24
PTP4A3-203ENST00000520105 PPDPFLQ8WWR9 84 aa13.53□□□□□ -0.24
PTP4A3-203ENST00000520105 RPL37AP8A6NKH3 93 aa13.52□□□□□ -0.25
PTP4A3-203ENST00000520105 SCGB1C2P0DMR2 95 aa13.52□□□□□ -0.25
PTP4A3-203ENST00000520105 PHF5AQ7RTV0 110 aaKnown RBP13.52□□□□□ -0.25
PTP4A3-203ENST00000520105 TMEM126AQ9H061 195 aa13.52□□□□□ -0.25
PTP4A3-203ENST00000520105 IGLV6-57P01721 117 aa13.51□□□□□ -0.25
PTP4A3-203ENST00000520105 PLAC8Q9NZF1 115 aa13.5□□□□□ -0.25
PTP4A3-203ENST00000520105 EPM2AB3EWF7 344 aa13.5□□□□□ -0.25
PTP4A3-203ENST00000520105 HAMPP81172 84 aa13.5□□□□□ -0.25
PTP4A3-203ENST00000520105 LINC01600Q96MT4 127 aa13.5□□□□□ -0.25
PTP4A3-203ENST00000520105 Q1RN00 199 aa13.48□□□□□ -0.25
PTP4A3-203ENST00000520105 CIRBP-AS1Q8TBR5 109 aa13.48□□□□□ -0.25
PTP4A3-203ENST00000520105 ATXN8Q156A1 80 aa13.47□□□□□ -0.25
PTP4A3-203ENST00000520105 SMIM11BQ8TCY0 68 aa13.47□□□□□ -0.25
PTP4A3-203ENST00000520105 IGLV1-50A0A075B6I6 118 aa13.46□□□□□ -0.25
PTP4A3-203ENST00000520105 SCXQ7RTU7 201 aa13.46□□□□□ -0.25
PTP4A3-203ENST00000520105 SLC25A20O43772 301 aa13.45□□□□□ -0.26
PTP4A3-203ENST00000520105 KRTAP11-1Q8IUC1 163 aa13.45□□□□□ -0.26
PTP4A3-203ENST00000520105 ANKRD29Q8N6D5 301 aa13.43□□□□□ -0.26
PTP4A3-203ENST00000520105 TRAV23DV6A0A075B6W5 121 aa13.42□□□□□ -0.26
PTP4A3-203ENST00000520105 UBE2BP63146 152 aa13.42□□□□□ -0.26
PTP4A3-203ENST00000520105 CDIP1Q9H305 208 aa13.42□□□□□ -0.26
PTP4A3-203ENST00000520105 C9JAW5 83 aa13.41□□□□□ -0.26
PTP4A3-203ENST00000520105 TRIAP1O43715 76 aa13.41□□□□□ -0.26
PTP4A3-203ENST00000520105 RPL28P46779 137 aaKnown RBP13.41□□□□□ -0.26
PTP4A3-203ENST00000520105 KCNQ1DNQ9H478 68 aa13.41□□□□□ -0.26
PTP4A3-203ENST00000520105 COX6CP09669 75 aa13.4□□□□□ -0.26
PTP4A3-203ENST00000520105 C6orf99Q4VX62 202 aa13.39□□□□□ -0.27
PTP4A3-203ENST00000520105 EPPK1P58107 5090 aaKnown RBP13.39□□□□□ -0.27
PTP4A3-203ENST00000520105 ZNF73O43830 326 aaPredicted RBP13.38□□□□□ -0.27
PTP4A3-203ENST00000520105 APOBP04114 4563 aaKnown RBP13.37□□□□□ -0.27
PTP4A3-203ENST00000520105 XGP55808 180 aa13.36□□□□□ -0.27
PTP4A3-203ENST00000520105 PRYO14603 147 aa13.36□□□□□ -0.27
PTP4A3-203ENST00000520105 REG3GQ6UW15 175 aa13.35□□□□□ -0.27
PTP4A3-203ENST00000520105 H3BT86 120 aa13.34□□□□□ -0.27
PTP4A3-203ENST00000520105 DIRC1Q969H9 104 aa13.34□□□□□ -0.27
PTP4A3-203ENST00000520105 LST1O00453 97 aa13.32□□□□□ -0.28
PTP4A3-203ENST00000520105 SPRR1AP35321 89 aa13.32□□□□□ -0.28
PTP4A3-203ENST00000520105 KRTAP4-16G5E9R7 235 aaPredicted RBP13.31□□□□□ -0.28
PTP4A3-203ENST00000520105 PSORS1C2Q9UIG4 136 aa13.3□□□□□ -0.28
PTP4A3-203ENST00000520105 CLEC2BQ92478 149 aa13.29□□□□□ -0.28
PTP4A3-203ENST00000520105 A0A1B0GV72 72 aa13.29□□□□□ -0.28
PTP4A3-203ENST00000520105 ETDCA0A1B0GVM5 59 aa13.27□□□□□ -0.28
PTP4A3-203ENST00000520105 COX7BP24311 80 aa13.27□□□□□ -0.28
PTP4A3-203ENST00000520105 ELOF1P60002 83 aaKnown RBP13.27□□□□□ -0.29
PTP4A3-203ENST00000520105 B5MCH6 92 aa13.26□□□□□ -0.29
PTP4A3-203ENST00000520105 H0YGX0 51 aa13.26□□□□□ -0.29
PTP4A3-203ENST00000520105 MT-ATP8P03928 68 aa13.26□□□□□ -0.29
PTP4A3-203ENST00000520105 FAM19A1Q7Z5A9 133 aa13.26□□□□□ -0.29
PTP4A3-203ENST00000520105 FAM218AQ96MZ4 157 aa13.26□□□□□ -0.29
PTP4A3-203ENST00000520105 TRBV7-6A0A0J9YX20 115 aa13.25□□□□□ -0.29
PTP4A3-203ENST00000520105 SMR3BP02814 79 aaPredicted RBP13.25□□□□□ -0.29
PTP4A3-203ENST00000520105 PRLHP81277 87 aa13.24□□□□□ -0.29
PTP4A3-203ENST00000520105 C1orf137Q5JT78 98 aa13.24□□□□□ -0.29
PTP4A3-203ENST00000520105 LINC00528Q8N1L1 170 aa13.24□□□□□ -0.29
PTP4A3-203ENST00000520105 BCE1O60756 84 aa13.23□□□□□ -0.29
PTP4A3-203ENST00000520105 Q6ZRX8 168 aa13.23□□□□□ -0.29
PTP4A3-203ENST00000520105 TEX49A0A1B0GTD5 131 aa13.21□□□□□ -0.29
PTP4A3-203ENST00000520105 LINC00575Q6W349 94 aa13.21□□□□□ -0.29
PTP4A3-203ENST00000520105 Q9BRP9 147 aa13.21□□□□□ -0.3
PTP4A3-203ENST00000520105 VPS13BQ7Z7G8 4022 aa13.2□□□□□ -0.3
PTP4A3-203ENST00000520105 SRRM2Q9UQ35 2752 aaKnown RBP13.2□□□□□ -0.3
PTP4A3-203ENST00000520105 FAM240AA0A1B0GVK7 77 aa13.2□□□□□ -0.3
PTP4A3-203ENST00000520105 UBE2AP49459 152 aa13.19□□□□□ -0.3
PTP4A3-203ENST00000520105 FAT1Q14517 4588 aa13.18□□□□□ -0.3
PTP4A3-203ENST00000520105 CDK2AP2O75956 126 aa13.17□□□□□ -0.3
PTP4A3-203ENST00000520105 TRACP01848 142 aa13.17□□□□□ -0.3
PTP4A3-203ENST00000520105 RYR1P21817 5038 aa13.17□□□□□ -0.3
PTP4A3-203ENST00000520105 KRTAP13-1Q8IUC0 172 aa13.16□□□□□ -0.3
PTP4A3-203ENST00000520105 KIAA1109Q2LD37 5005 aa13.16□□□□□ -0.3
PTP4A3-203ENST00000520105 hADV29S1A0JD25 119 aa13.16□□□□□ -0.3
PTP4A3-203ENST00000520105 HSPG2P98160 4391 aa13.15□□□□□ -0.3
PTP4A3-203ENST00000520105 SMCR5Q8TEV8 140 aa13.15□□□□□ -0.3
PTP4A3-203ENST00000520105 HIGD2AQ9BW72 106 aa13.15□□□□□ -0.3
PTP4A3-203ENST00000520105 H0Y9J4 135 aa13.14□□□□□ -0.31
PTP4A3-203ENST00000520105 ERC2-IT1O76042 136 aa13.14□□□□□ -0.31
PTP4A3-203ENST00000520105 IGLV7-43P04211 117 aa13.14□□□□□ -0.31
PTP4A3-203ENST00000520105 INAFM2P0DMQ5 153 aa13.14□□□□□ -0.31
PTP4A3-203ENST00000520105 Q6Q795 121 aa13.14□□□□□ -0.31
PTP4A3-203ENST00000520105 SNCGO76070 127 aa13.13□□□□□ -0.31
PTP4A3-203ENST00000520105 DHRS4-AS1Q9P1J3 65 aa13.13□□□□□ -0.31
PTP4A3-203ENST00000520105 A0A1B0GX51 115 aa13.1□□□□□ -0.31
PTP4A3-203ENST00000520105 ZNF861PO60384 105 aa13.1□□□□□ -0.31
PTP4A3-203ENST00000520105 RPL37AP61513 92 aaKnown RBP13.1□□□□□ -0.31
PTP4A3-203ENST00000520105 DNAL4O96015 105 aa13.08□□□□□ -0.32
PTP4A3-203ENST00000520105 ACYP1P07311 99 aa13.08□□□□□ -0.32
PTP4A3-203ENST00000520105 Q6ZQY7 126 aa13.08□□□□□ -0.32
PTP4A3-203ENST00000520105 ST20-AS1Q8NBB2 130 aa13.08□□□□□ -0.32
PTP4A3-203ENST00000520105 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.04□□□□□ -0.32
PTP4A3-203ENST00000520105 DEFB105AQ8NG35 78 aa13.03□□□□□ -0.32
PTP4A3-203ENST00000520105 KRTAP10-4P60372 401 aaPredicted RBP13.02□□□□□ -0.32
PTP4A3-203ENST00000520105 KRTAP17-1Q9BYP8 105 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms