RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 KCNQ1DNQ9H478 68 aa4.59□□□□□ -1.67
CTNNA1-215ENST00000519309 MYMXA0A1B0GTQ4 84 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 PRYO14603 147 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST1H2BKO60814 126 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 ERC2-IT1O76042 136 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 IGKCP01834 107 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST1H2BJP06899 126 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST1H2BOP23527 126 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST1H2BBP33778 126 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST1H2BDP58876 126 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST1H2BCP62807 126 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST2H2BEQ16778 126 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 LINC00483Q53H64 154 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 ADAMTSL4-AS1Q5T5F5 129 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 SMCR5Q8TEV8 140 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST1H2BHQ93079 126 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST1H2BNQ99877 126 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HIST1H2BMQ99879 126 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 HSPB8Q9UJY1 196 aa4.58□□□□□ -1.68
CTNNA1-215ENST00000519309 IGLV8-61A0A075B6I0 122 aa4.57□□□□□ -1.68
CTNNA1-215ENST00000519309 LOC107984156A0A0G2JMH3 177 aa4.57□□□□□ -1.68
CTNNA1-215ENST00000519309 SLC25A20O43772 301 aa4.57□□□□□ -1.68
CTNNA1-215ENST00000519309 ATP6V1G1O75348 118 aa4.57□□□□□ -1.68
CTNNA1-215ENST00000519309 PCOTHQ58A44 107 aa4.57□□□□□ -1.68
CTNNA1-215ENST00000519309 ARL17AQ8IVW1 177 aa4.57□□□□□ -1.68
CTNNA1-215ENST00000519309 M0R2T5 61 aa4.56□□□□□ -1.68
CTNNA1-215ENST00000519309 NPC2P61916 151 aa4.56□□□□□ -1.68
CTNNA1-215ENST00000519309 A0A0J9YXY3 114 aa4.55□□□□□ -1.68
CTNNA1-215ENST00000519309 B5MCH6 92 aa4.55□□□□□ -1.68
CTNNA1-215ENST00000519309 SYS1-DBNDD2H3BUS1 97 aa4.55□□□□□ -1.68
CTNNA1-215ENST00000519309 LGALS3P17931 250 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-215ENST00000519309 LITAFQ99732 161 aa4.55□□□□□ -1.68
CTNNA1-215ENST00000519309 Q9BRP9 147 aa4.55□□□□□ -1.68
CTNNA1-215ENST00000519309 MAP1LC3CQ9BXW4 147 aa4.55□□□□□ -1.68
CTNNA1-215ENST00000519309 TTTY13Q9BZ97 58 aa4.55□□□□□ -1.68
CTNNA1-215ENST00000519309 ETDCA0A1B0GVM5 59 aa4.54□□□□□ -1.68
CTNNA1-215ENST00000519309 LINC00587B1AMM8 73 aa4.54□□□□□ -1.68
CTNNA1-215ENST00000519309 E9PLD3 99 aa4.54□□□□□ -1.68
CTNNA1-215ENST00000519309 IGLV6-57P01721 117 aa4.54□□□□□ -1.68
CTNNA1-215ENST00000519309 DDTP30046 118 aa4.54□□□□□ -1.68
CTNNA1-215ENST00000519309 NMUP48645 174 aa4.54□□□□□ -1.68
CTNNA1-215ENST00000519309 HERVK_113P61574 105 aa4.54□□□□□ -1.68
CTNNA1-215ENST00000519309 LINC01545Q5VT33 79 aa4.54□□□□□ -1.68
CTNNA1-215ENST00000519309 TRBV10-2A0A0K0K1G8 114 aa4.53□□□□□ -1.68
CTNNA1-215ENST00000519309 MOBPQ13875 183 aa4.53□□□□□ -1.68
CTNNA1-215ENST00000519309 SSBP3-AS1Q7Z2R9 100 aa4.53□□□□□ -1.68
CTNNA1-215ENST00000519309 SPANXB1Q9NS25 103 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-215ENST00000519309 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
CTNNA1-215ENST00000519309 NDUFC2O95298 119 aa4.52□□□□□ -1.69
CTNNA1-215ENST00000519309 C3orf79P0CE67 100 aa4.52□□□□□ -1.69
CTNNA1-215ENST00000519309 GAGE2AQ6NT46 116 aa4.52□□□□□ -1.69
CTNNA1-215ENST00000519309 Q6ZRX8 168 aa4.52□□□□□ -1.69
CTNNA1-215ENST00000519309 TRAV23DV6A0A075B6W5 121 aa4.51□□□□□ -1.69
CTNNA1-215ENST00000519309 ST20-AS1Q8NBB2 130 aa4.51□□□□□ -1.69
CTNNA1-215ENST00000519309 LINC00308Q8TCZ7 52 aa4.51□□□□□ -1.69
CTNNA1-215ENST00000519309 MIEN1Q9BRT3 115 aa4.51□□□□□ -1.69
CTNNA1-215ENST00000519309 IGLV9-49A0A0B4J1Y8 123 aa4.5□□□□□ -1.69
CTNNA1-215ENST00000519309 COA6Q5JTJ3 125 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-215ENST00000519309 S100A7L2Q5SY68 101 aa4.5□□□□□ -1.69
CTNNA1-215ENST00000519309 PET117Q6UWS5 81 aa4.5□□□□□ -1.69
CTNNA1-215ENST00000519309 COX6B2Q6YFQ2 88 aa4.5□□□□□ -1.69
CTNNA1-215ENST00000519309 ZNF815PA8K554 130 aa4.49□□□□□ -1.69
CTNNA1-215ENST00000519309 ZNF73O43830 326 aaPredicted RBP4.49□□□□□ -1.69
CTNNA1-215ENST00000519309 TIMM17BO60830 172 aa4.48□□□□□ -1.69
CTNNA1-215ENST00000519309 CFC1P0CG37 223 aa4.48□□□□□ -1.69
CTNNA1-215ENST00000519309 KRTDAPP60985 99 aa4.48□□□□□ -1.69
CTNNA1-215ENST00000519309 ATOH7Q8N100 152 aa4.48□□□□□ -1.69
CTNNA1-215ENST00000519309 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
CTNNA1-215ENST00000519309 USH2AO75445 5202 aa4.48□□□□□ -1.69
CTNNA1-215ENST00000519309 SPANXCQ9NY87 97 aa4.47□□□□□ -1.69
CTNNA1-215ENST00000519309 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
CTNNA1-215ENST00000519309 S100A12P80511 92 aa4.46□□□□□ -1.7
CTNNA1-215ENST00000519309 PCP2Q8IVA1 136 aa4.45□□□□□ -1.7
CTNNA1-215ENST00000519309 OR13C6PQ8NH95 151 aa4.45□□□□□ -1.7
CTNNA1-215ENST00000519309 LIMD2Q9BT23 127 aa4.45□□□□□ -1.7
CTNNA1-215ENST00000519309 RPL37P61927 97 aaKnown RBP4.44□□□□□ -1.7
CTNNA1-215ENST00000519309 JOSD1Q15040 202 aaPredicted RBP4.44□□□□□ -1.7
CTNNA1-215ENST00000519309 C9orf153Q5TBE3 101 aa4.44□□□□□ -1.7
CTNNA1-215ENST00000519309 SPANXDQ9BXN6 97 aa4.44□□□□□ -1.7
CTNNA1-215ENST00000519309 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
CTNNA1-215ENST00000519309 SPRR1BP22528 89 aa4.43□□□□□ -1.7
CTNNA1-215ENST00000519309 ELOF1P60002 83 aaKnown RBP4.43□□□□□ -1.7
CTNNA1-215ENST00000519309 C6orf99Q4VX62 202 aa4.43□□□□□ -1.7
CTNNA1-215ENST00000519309 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
CTNNA1-215ENST00000519309 SCGB1D4Q6XE38 83 aa4.42□□□□□ -1.7
CTNNA1-215ENST00000519309 HIST3H2BBQ8N257 126 aa4.42□□□□□ -1.7
CTNNA1-215ENST00000519309 COX7BP24311 80 aa4.41□□□□□ -1.7
CTNNA1-215ENST00000519309 MUSTN1Q8IVN3 82 aa4.41□□□□□ -1.7
CTNNA1-215ENST00000519309 HIST1H2BLQ99880 126 aa4.41□□□□□ -1.7
CTNNA1-215ENST00000519309 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
CTNNA1-215ENST00000519309 A0A0G2JQZ4 141 aa4.4□□□□□ -1.71
CTNNA1-215ENST00000519309 C20orf202A1L168 122 aa4.4□□□□□ -1.71
CTNNA1-215ENST00000519309 Q1RN00 199 aa4.4□□□□□ -1.71
CTNNA1-215ENST00000519309 HRCT1Q6UXD1 115 aa4.4□□□□□ -1.71
CTNNA1-215ENST00000519309 SMIM29Q86T20 159 aa4.4□□□□□ -1.71
CTNNA1-215ENST00000519309 LINC00518Q8N0U6 118 aa4.4□□□□□ -1.71
CTNNA1-215ENST00000519309 DHRS4-AS1Q9P1J3 65 aa4.4□□□□□ -1.71
CTNNA1-215ENST00000519309 C5orf52A6NGY3 159 aa4.39□□□□□ -1.71
CTNNA1-215ENST00000519309 HINT1P49773 126 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms