RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 PRR4Q16378 134 aa6.22□□□□□ -1.41
PDGFRB-203ENST00000517660 FAM229BQ4G0N7 80 aa6.22□□□□□ -1.41
PDGFRB-203ENST00000517660 BVES-AS1Q5T3Y7 98 aa6.22□□□□□ -1.41
PDGFRB-203ENST00000517660 SMIM13P0DJ93 91 aa6.21□□□□□ -1.42
PDGFRB-203ENST00000517660 HERV-K104P63124 156 aa6.21□□□□□ -1.42
PDGFRB-203ENST00000517660 PRLHP81277 87 aa6.21□□□□□ -1.42
PDGFRB-203ENST00000517660 MEIG1Q5JSS6 88 aa6.21□□□□□ -1.42
PDGFRB-203ENST00000517660 HIGD1BQ9P298 99 aa6.21□□□□□ -1.42
PDGFRB-203ENST00000517660 MYMXA0A1B0GTQ4 84 aa6.2□□□□□ -1.42
PDGFRB-203ENST00000517660 E9PLD3 99 aa6.2□□□□□ -1.42
PDGFRB-203ENST00000517660 A6NDN8 102 aa6.19□□□□□ -1.42
PDGFRB-203ENST00000517660 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
PDGFRB-203ENST00000517660 PLEKHB2Q96CS7 222 aa6.19□□□□□ -1.42
PDGFRB-203ENST00000517660 TTTY13Q9BZ97 58 aa6.19□□□□□ -1.42
PDGFRB-203ENST00000517660 NDUFA12Q9UI09 145 aa6.19□□□□□ -1.42
PDGFRB-203ENST00000517660 MIR7-3HGQ8N6C7 128 aa6.18□□□□□ -1.42
PDGFRB-203ENST00000517660 ZNF815PA8K554 130 aa6.17□□□□□ -1.42
PDGFRB-203ENST00000517660 LEPROTO15243 131 aa6.17□□□□□ -1.42
PDGFRB-203ENST00000517660 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
PDGFRB-203ENST00000517660 HIGD2AQ9BW72 106 aa6.17□□□□□ -1.42
PDGFRB-203ENST00000517660 SCGB1D4Q6XE38 83 aa6.16□□□□□ -1.42
PDGFRB-203ENST00000517660 LINC00304Q8N9R0 145 aa6.16□□□□□ -1.42
PDGFRB-203ENST00000517660 PRYO14603 147 aa6.15□□□□□ -1.42
PDGFRB-203ENST00000517660 NCR3O14931 201 aa6.15□□□□□ -1.42
PDGFRB-203ENST00000517660 TSPEAR-AS2P59090 65 aa6.15□□□□□ -1.42
PDGFRB-203ENST00000517660 TAL2Q16559 108 aa6.15□□□□□ -1.42
PDGFRB-203ENST00000517660 HIST1H4GQ99525 98 aa6.15□□□□□ -1.42
PDGFRB-203ENST00000517660 KCNQ1DNQ9H478 68 aa6.15□□□□□ -1.42
PDGFRB-203ENST00000517660 LOC107984156A0A0G2JMH3 177 aa6.14□□□□□ -1.43
PDGFRB-203ENST00000517660 J3QQQ9 107 aa6.14□□□□□ -1.43
PDGFRB-203ENST00000517660 TAX1BP3O14907 124 aa6.14□□□□□ -1.43
PDGFRB-203ENST00000517660 SPRR1AP35321 89 aa6.14□□□□□ -1.43
PDGFRB-203ENST00000517660 ARL17AQ8IVW1 177 aa6.14□□□□□ -1.43
PDGFRB-203ENST00000517660 CEND1Q8N111 149 aa6.14□□□□□ -1.43
PDGFRB-203ENST00000517660 LINC00337Q8N6G1 96 aa6.14□□□□□ -1.43
PDGFRB-203ENST00000517660 VAMP3Q15836 100 aa6.13□□□□□ -1.43
PDGFRB-203ENST00000517660 Q6ZVH6 145 aa6.13□□□□□ -1.43
PDGFRB-203ENST00000517660 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
PDGFRB-203ENST00000517660 ZNF706Q9Y5V0 76 aaPredicted RBP6.13□□□□□ -1.43
PDGFRB-203ENST00000517660 TRBV10-3A0A0K0K1G6 114 aa6.12□□□□□ -1.43
PDGFRB-203ENST00000517660 ETDCA0A1B0GVM5 59 aa6.12□□□□□ -1.43
PDGFRB-203ENST00000517660 FXYD2P54710 66 aa6.12□□□□□ -1.43
PDGFRB-203ENST00000517660 DAND5Q8N907 189 aa6.12□□□□□ -1.43
PDGFRB-203ENST00000517660 SMCR5Q8TEV8 140 aa6.12□□□□□ -1.43
PDGFRB-203ENST00000517660 TRBV10-2A0A0K0K1G8 114 aa6.11□□□□□ -1.43
PDGFRB-203ENST00000517660 TMEM238LA0A1B0GVL6 79 aa6.11□□□□□ -1.43
PDGFRB-203ENST00000517660 A6NJY4 79 aa6.11□□□□□ -1.43
PDGFRB-203ENST00000517660 KRTAP4-16G5E9R7 235 aaPredicted RBP6.11□□□□□ -1.43
PDGFRB-203ENST00000517660 C3orf22Q8N5N4 141 aa6.11□□□□□ -1.43
PDGFRB-203ENST00000517660 RAB37Q96AX2 223 aa6.11□□□□□ -1.43
PDGFRB-203ENST00000517660 NHP2Q9NX24 153 aaKnown RBP6.11□□□□□ -1.43
PDGFRB-203ENST00000517660 C9orf118A6NHY6 69 aa6.1□□□□□ -1.43
PDGFRB-203ENST00000517660 SPAG11AQ6PDA7 123 aa6.1□□□□□ -1.43
PDGFRB-203ENST00000517660 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
PDGFRB-203ENST00000517660 H3BUT2 72 aa6.09□□□□□ -1.43
PDGFRB-203ENST00000517660 K7ERJ3 54 aa6.09□□□□□ -1.43
PDGFRB-203ENST00000517660 NDUFC2O95298 119 aa6.09□□□□□ -1.43
PDGFRB-203ENST00000517660 RETNLBQ9BQ08 111 aa6.09□□□□□ -1.43
PDGFRB-203ENST00000517660 SPANXB1Q9NS25 103 aaPredicted RBP6.09□□□□□ -1.43
PDGFRB-203ENST00000517660 B5MCH6 92 aa6.08□□□□□ -1.44
PDGFRB-203ENST00000517660 UBE2V1Q13404 147 aa6.08□□□□□ -1.44
PDGFRB-203ENST00000517660 C4orf48Q5BLP8 95 aa6.08□□□□□ -1.44
PDGFRB-203ENST00000517660 IGLV7-46A0A075B6I9 117 aa6.07□□□□□ -1.44
PDGFRB-203ENST00000517660 A0A0J9YXY3 114 aa6.07□□□□□ -1.44
PDGFRB-203ENST00000517660 S100A7L2Q5SY68 101 aa6.07□□□□□ -1.44
PDGFRB-203ENST00000517660 GTF2H5Q6ZYL4 71 aa6.07□□□□□ -1.44
PDGFRB-203ENST00000517660 PPDPFQ9H3Y8 114 aa6.07□□□□□ -1.44
PDGFRB-203ENST00000517660 A0A1W2PPM0 123 aa6.06□□□□□ -1.44
PDGFRB-203ENST00000517660 IGLV6-57P01721 117 aa6.06□□□□□ -1.44
PDGFRB-203ENST00000517660 FABP2P12104 132 aa6.06□□□□□ -1.44
PDGFRB-203ENST00000517660 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
PDGFRB-203ENST00000517660 ADAMTSL4-AS1Q5T5F5 129 aa6.06□□□□□ -1.44
PDGFRB-203ENST00000517660 GAGE2AQ6NT46 116 aa6.06□□□□□ -1.44
PDGFRB-203ENST00000517660 NAA38Q9BRA0 125 aaKnown RBP6.06□□□□□ -1.44
PDGFRB-203ENST00000517660 ERC2-IT1O76042 136 aa6.05□□□□□ -1.44
PDGFRB-203ENST00000517660 SOSTDC1Q6X4U4 206 aa6.05□□□□□ -1.44
PDGFRB-203ENST00000517660 Q8NBF4 154 aa6.05□□□□□ -1.44
PDGFRB-203ENST00000517660 A0A1B0GWB2 263 aa6.04□□□□□ -1.44
PDGFRB-203ENST00000517660 K7EP34 96 aa6.04□□□□□ -1.44
PDGFRB-203ENST00000517660 EIF4EBP3O60516 100 aaPredicted RBP6.04□□□□□ -1.44
PDGFRB-203ENST00000517660 TPRXLQ17RH7 258 aa6.04□□□□□ -1.44
PDGFRB-203ENST00000517660 Q6ZRX8 168 aa6.04□□□□□ -1.44
PDGFRB-203ENST00000517660 Q9BRP9 147 aa6.04□□□□□ -1.44
PDGFRB-203ENST00000517660 SPCS1Q9Y6A9 102 aa6.04□□□□□ -1.44
PDGFRB-203ENST00000517660 TRAV23DV6A0A075B6W5 121 aa6.03□□□□□ -1.44
PDGFRB-203ENST00000517660 SPINK1P00995 79 aa6.03□□□□□ -1.44
PDGFRB-203ENST00000517660 NPC2P61916 151 aa6.03□□□□□ -1.44
PDGFRB-203ENST00000517660 SSBP3-AS1Q7Z2R9 100 aa6.03□□□□□ -1.44
PDGFRB-203ENST00000517660 CDIP1Q9H305 208 aa6.03□□□□□ -1.44
PDGFRB-203ENST00000517660 CBY1Q9Y3M2 126 aa6.03□□□□□ -1.44
PDGFRB-203ENST00000517660 ZNF73O43830 326 aaPredicted RBP6.02□□□□□ -1.45
PDGFRB-203ENST00000517660 TIMM17BO60830 172 aa6.02□□□□□ -1.45
PDGFRB-203ENST00000517660 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
PDGFRB-203ENST00000517660 LINC00308Q8TCZ7 52 aa6.02□□□□□ -1.45
PDGFRB-203ENST00000517660 LITAFQ99732 161 aa6.02□□□□□ -1.45
PDGFRB-203ENST00000517660 SPANXDQ9BXN6 97 aa6.02□□□□□ -1.45
PDGFRB-203ENST00000517660 SPANXCQ9NY87 97 aa6.02□□□□□ -1.45
PDGFRB-203ENST00000517660 IGLV9-49A0A0B4J1Y8 123 aa6.01□□□□□ -1.45
PDGFRB-203ENST00000517660 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
PDGFRB-203ENST00000517660 LYRM7Q5U5X0 104 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms