RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SMIM23A6NLE4 172 aa-4.66□□□□□ -3.16
RNU6-542P-201ENST00000516405 TPM1P09493 284 aa-4.66□□□□□ -3.16
RNU6-542P-201ENST00000516405 TCTAP57738 103 aa-4.67□□□□□ -3.16
RNU6-542P-201ENST00000516405 AP4S1Q9Y587 144 aa-4.67□□□□□ -3.16
RNU6-542P-201ENST00000516405 SYNMO15061 1565 aa-4.67□□□□□ -3.16
RNU6-542P-201ENST00000516405 FAM135AQ9P2D6 1515 aa-4.67□□□□□ -3.16
RNU6-542P-201ENST00000516405 A0A1B0GX51 115 aa-4.68□□□□□ -3.16
RNU6-542P-201ENST00000516405 C7orf77A4D0Y5 90 aa-4.68□□□□□ -3.16
RNU6-542P-201ENST00000516405 M0QZ58 72 aa-4.68□□□□□ -3.16
RNU6-542P-201ENST00000516405 KIF1AQ12756 1690 aa-4.69□□□□□ -3.16
RNU6-542P-201ENST00000516405 ROBO1Q9Y6N7 1651 aa-4.69□□□□□ -3.16
RNU6-542P-201ENST00000516405 WT1-ASQ06250 92 aa-4.69□□□□□ -3.16
RNU6-542P-201ENST00000516405 ARL11Q969Q4 196 aa-4.69□□□□□ -3.16
RNU6-542P-201ENST00000516405 ATP6V1DQ9Y5K8 247 aa-4.69□□□□□ -3.16
RNU6-542P-201ENST00000516405 GRIN2AQ12879 1464 aa-4.69□□□□□ -3.16
RNU6-542P-201ENST00000516405 CPSF1Q10570 1443 aaKnown RBP-4.7□□□□□ -3.16
RNU6-542P-201ENST00000516405 TNFSF15O95150 251 aa-4.7□□□□□ -3.16
RNU6-542P-201ENST00000516405 RPL38P63173 70 aaKnown RBP-4.7□□□□□ -3.16
RNU6-542P-201ENST00000516405 MRPS25P82663 173 aaKnown RBP-4.7□□□□□ -3.16
RNU6-542P-201ENST00000516405 PTRHD1Q6GMV3 140 aaKnown RBP-4.7□□□□□ -3.16
RNU6-542P-201ENST00000516405 OR9Q1Q8NGQ5 310 aa-4.7□□□□□ -3.16
RNU6-542P-201ENST00000516405 RGPD1P0DJD0 1748 aa-4.7□□□□□ -3.16
RNU6-542P-201ENST00000516405 LOC400499M0QZD8 3231 aa-4.71□□□□□ -3.16
RNU6-542P-201ENST00000516405 SCTP09683 121 aa-4.71□□□□□ -3.16
RNU6-542P-201ENST00000516405 TRAPPC2P0DI81 140 aa-4.71□□□□□ -3.16
RNU6-542P-201ENST00000516405 TRAPPC2BP0DI82 140 aa-4.71□□□□□ -3.16
RNU6-542P-201ENST00000516405 SMIM21Q3B7S5 101 aa-4.71□□□□□ -3.16
RNU6-542P-201ENST00000516405 COMMD6Q7Z4G1 85 aa-4.71□□□□□ -3.16
RNU6-542P-201ENST00000516405 LEAP2Q969E1 77 aa-4.71□□□□□ -3.16
RNU6-542P-201ENST00000516405 NWD1Q149M9 1564 aa-4.71□□□□□ -3.16
RNU6-542P-201ENST00000516405 UNC80Q8N2C7 3258 aa-4.71□□□□□ -3.16
RNU6-542P-201ENST00000516405 TCEAL4Q96EI5 215 aa-4.72□□□□□ -3.17
RNU6-542P-201ENST00000516405 SPANXDQ9BXN6 97 aa-4.72□□□□□ -3.17
RNU6-542P-201ENST00000516405 C12orf73Q69YU5 71 aa-4.73□□□□□ -3.17
RNU6-542P-201ENST00000516405 HIGD1AQ9Y241 93 aa-4.73□□□□□ -3.17
RNU6-542P-201ENST00000516405 IGLC6P0CF74 106 aa-4.74□□□□□ -3.17
RNU6-542P-201ENST00000516405 IGLC2P0DOY2 106 aa-4.74□□□□□ -3.17
RNU6-542P-201ENST00000516405 IGLC3P0DOY3 106 aa-4.74□□□□□ -3.17
RNU6-542P-201ENST00000516405 LSM10Q969L4 123 aaKnown RBP-4.74□□□□□ -3.17
RNU6-542P-201ENST00000516405 VCANP13611 3396 aa-4.74□□□□□ -3.17
RNU6-542P-201ENST00000516405 PFDN1O60925 122 aa-4.75□□□□□ -3.17
RNU6-542P-201ENST00000516405 COX6CP09669 75 aa-4.75□□□□□ -3.17
RNU6-542P-201ENST00000516405 Q0VG73 95 aa-4.75□□□□□ -3.17
RNU6-542P-201ENST00000516405 TMEM35BQ8NCS4 154 aa-4.75□□□□□ -3.17
RNU6-542P-201ENST00000516405 NOP10Q9NPE3 64 aaKnown RBP-4.75□□□□□ -3.17
RNU6-542P-201ENST00000516405 ERVK-7P63135 1459 aa-4.75□□□□□ -3.17
RNU6-542P-201ENST00000516405 PIK3C2BO00750 1634 aa-4.75□□□□□ -3.17
RNU6-542P-201ENST00000516405 TRAV36DV7A0A075B6V5 113 aa-4.76□□□□□ -3.17
RNU6-542P-201ENST00000516405 DNAH12Q6ZR08 3092 aa-4.76□□□□□ -3.17
RNU6-542P-201ENST00000516405 DPH3Q96FX2 82 aa-4.76□□□□□ -3.17
RNU6-542P-201ENST00000516405 CEP19Q96LK0 163 aa-4.76□□□□□ -3.17
RNU6-542P-201ENST00000516405 MANBALQ9NQG1 85 aa-4.76□□□□□ -3.17
RNU6-542P-201ENST00000516405 DDX60LQ5H9U9 1706 aaKnown RBP-4.77□□□□□ -3.17
RNU6-542P-201ENST00000516405 DOT1LQ8TEK3 1739 aa-4.77□□□□□ -3.17
RNU6-542P-201ENST00000516405 C12orf57Q99622 126 aa-4.77□□□□□ -3.17
RNU6-542P-201ENST00000516405 LLPHQ9BRT6 129 aaKnown RBP-4.77□□□□□ -3.17
RNU6-542P-201ENST00000516405 LRRC7Q96NW7 1537 aa-4.77□□□□□ -3.17
RNU6-542P-201ENST00000516405 LRRIQ1Q96JM4 1722 aa-4.77□□□□□ -3.17
RNU6-542P-201ENST00000516405 KIF21BO75037 1637 aa-4.78□□□□□ -3.17
RNU6-542P-201ENST00000516405 Q56UQ5 140 aa-4.78□□□□□ -3.17
RNU6-542P-201ENST00000516405 TPM2P07951 284 aa-4.79□□□□□ -3.18
RNU6-542P-201ENST00000516405 KCNRGQ8N5I3 272 aa-4.79□□□□□ -3.18
RNU6-542P-201ENST00000516405 M0QY20 66 aa-4.8□□□□□ -3.18
RNU6-542P-201ENST00000516405 LINC00694P0DN24 101 aa-4.8□□□□□ -3.18
RNU6-542P-201ENST00000516405 GUCA1AP43080 201 aaPredicted RBP-4.8□□□□□ -3.18
RNU6-542P-201ENST00000516405 PRO1854Q9UHT4 67 aa-4.8□□□□□ -3.18
RNU6-542P-201ENST00000516405 ITSN1Q15811 1721 aa-4.8□□□□□ -3.18
RNU6-542P-201ENST00000516405 LCE6AA0A183 80 aa-4.81□□□□□ -3.18
RNU6-542P-201ENST00000516405 ROCK1Q13464 1354 aa-4.81□□□□□ -3.18
RNU6-542P-201ENST00000516405 LTN1O94822 1766 aa-4.81□□□□□ -3.18
RNU6-542P-201ENST00000516405 CTXN2P0C2S0 81 aa-4.82□□□□□ -3.18
RNU6-542P-201ENST00000516405 S100PP25815 95 aa-4.82□□□□□ -3.18
RNU6-542P-201ENST00000516405 VAMP8Q9BV40 100 aa-4.82□□□□□ -3.18
RNU6-542P-201ENST00000516405 SERP1Q9Y6X1 66 aa-4.82□□□□□ -3.18
RNU6-542P-201ENST00000516405 OVOS2A0A0J9YW53 1432 aa-4.82□□□□□ -3.18
RNU6-542P-201ENST00000516405 OVOS2Q6IE36 1432 aa-4.82□□□□□ -3.18
RNU6-542P-201ENST00000516405 ZC3H13Q5T200 1668 aaKnown RBP-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 CHD1O14646 1710 aa-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 F6UZH7 168 aa-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 ACYP1P07311 99 aa-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 SAMD13Q5VXD3 122 aa-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 TOMM20LQ6UXN7 152 aa-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 PPP1R14BQ96C90 147 aa-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 HOPXQ9BPY8 73 aaPredicted RBP-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 BOLA2Q9H3K6 86 aa-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 CFTRP13569 1480 aa-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 MLH3Q9UHC1 1453 aa-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 CROCC2H7BZ55 1655 aa-4.83□□□□□ -3.18
RNU6-542P-201ENST00000516405 LEPROTL1O95214 131 aa-4.84□□□□□ -3.18
RNU6-542P-201ENST00000516405 TPM3P06753 285 aa-4.84□□□□□ -3.18
RNU6-542P-201ENST00000516405 ATP6V1G3Q96LB4 118 aa-4.84□□□□□ -3.18
RNU6-542P-201ENST00000516405 AIF1LQ9BQI0 150 aa-4.85□□□□□ -3.19
RNU6-542P-201ENST00000516405 ASPMQ8IZT6 3477 aa-4.85□□□□□ -3.19
RNU6-542P-201ENST00000516405 CC2D2AQ9P2K1 1620 aa-4.86□□□□□ -3.19
RNU6-542P-201ENST00000516405 BAZ1AQ9NRL2 1556 aaPredicted RBP-4.86□□□□□ -3.19
RNU6-542P-201ENST00000516405 RPS27P42677 84 aaKnown RBP-4.86□□□□□ -3.19
RNU6-542P-201ENST00000516405 GNG11P61952 73 aa-4.86□□□□□ -3.19
RNU6-542P-201ENST00000516405 TPM4P67936 248 aa-4.86□□□□□ -3.19
RNU6-542P-201ENST00000516405 RPS27LQ71UM5 84 aaKnown RBP-4.86□□□□□ -3.19
RNU6-542P-201ENST00000516405 PPP3R2Q96LZ3 170 aa-4.86□□□□□ -3.19
Retrieved 100 of 20,778 RNA–protein pairs in 270.8 ms