RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
SGCA-211ENST00000514934 ARL17AQ8IVW1 177 aa8.48□□□□□ -1.05
SGCA-211ENST00000514934 NDUFA12Q9UI09 145 aa8.48□□□□□ -1.05
SGCA-211ENST00000514934 HERV-K104P63124 156 aa8.47□□□□□ -1.05
SGCA-211ENST00000514934 BVES-AS1Q5T3Y7 98 aa8.47□□□□□ -1.05
SGCA-211ENST00000514934 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
SGCA-211ENST00000514934 KCNQ1DNQ9H478 68 aa8.46□□□□□ -1.06
SGCA-211ENST00000514934 PRYO14603 147 aa8.45□□□□□ -1.06
SGCA-211ENST00000514934 LEPROTO15243 131 aa8.45□□□□□ -1.06
SGCA-211ENST00000514934 NMUP48645 174 aa8.45□□□□□ -1.06
SGCA-211ENST00000514934 HSD52Q0P140 79 aa8.45□□□□□ -1.06
SGCA-211ENST00000514934 TAL2Q16559 108 aa8.45□□□□□ -1.06
SGCA-211ENST00000514934 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
SGCA-211ENST00000514934 SPRR4Q96PI1 79 aa8.45□□□□□ -1.06
SGCA-211ENST00000514934 IGKV2D-26A0A0A0MRZ7 120 aa8.44□□□□□ -1.06
SGCA-211ENST00000514934 NCR3O14931 201 aa8.44□□□□□ -1.06
SGCA-211ENST00000514934 C2orf91Q6ZV80 131 aa8.44□□□□□ -1.06
SGCA-211ENST00000514934 LINC00337Q8N6G1 96 aa8.44□□□□□ -1.06
SGCA-211ENST00000514934 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
SGCA-211ENST00000514934 MYMXA0A1B0GTQ4 84 aa8.43□□□□□ -1.06
SGCA-211ENST00000514934 A6NDN8 102 aa8.43□□□□□ -1.06
SGCA-211ENST00000514934 EIF4EBP3O60516 100 aaPredicted RBP8.43□□□□□ -1.06
SGCA-211ENST00000514934 MEIG1Q5JSS6 88 aa8.43□□□□□ -1.06
SGCA-211ENST00000514934 DAND5Q8N907 189 aa8.43□□□□□ -1.06
SGCA-211ENST00000514934 J3QQQ9 107 aa8.42□□□□□ -1.06
SGCA-211ENST00000514934 SMCR5Q8TEV8 140 aa8.42□□□□□ -1.06
SGCA-211ENST00000514934 RETNLBQ9BQ08 111 aa8.42□□□□□ -1.06
SGCA-211ENST00000514934 HIGD2AQ9BW72 106 aa8.42□□□□□ -1.06
SGCA-211ENST00000514934 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
SGCA-211ENST00000514934 SOSTDC1Q6X4U4 206 aa8.41□□□□□ -1.06
SGCA-211ENST00000514934 TAX1BP3O14907 124 aa8.4□□□□□ -1.06
SGCA-211ENST00000514934 UBE2V1Q13404 147 aa8.4□□□□□ -1.06
SGCA-211ENST00000514934 PCP2Q8IVA1 136 aa8.4□□□□□ -1.06
SGCA-211ENST00000514934 TRBV10-2A0A0K0K1G8 114 aa8.39□□□□□ -1.07
SGCA-211ENST00000514934 LGALS3P17931 250 aaKnown RBP8.39□□□□□ -1.07
SGCA-211ENST00000514934 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
SGCA-211ENST00000514934 KRTAP9-6A0A140TA67 174 aa8.38□□□□□ -1.07
SGCA-211ENST00000514934 B5MCH6 92 aa8.38□□□□□ -1.07
SGCA-211ENST00000514934 ERC2-IT1O76042 136 aa8.38□□□□□ -1.07
SGCA-211ENST00000514934 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
SGCA-211ENST00000514934 Q6ZVH6 145 aa8.38□□□□□ -1.07
SGCA-211ENST00000514934 ZNF815PA8K554 130 aa8.37□□□□□ -1.07
SGCA-211ENST00000514934 VAMP3Q15836 100 aa8.37□□□□□ -1.07
SGCA-211ENST00000514934 Q9BRP9 147 aa8.37□□□□□ -1.07
SGCA-211ENST00000514934 SPANXB1Q9NS25 103 aaPredicted RBP8.37□□□□□ -1.07
SGCA-211ENST00000514934 TIMM17BO60830 172 aa8.36□□□□□ -1.07
SGCA-211ENST00000514934 IGLV6-57P01721 117 aa8.36□□□□□ -1.07
SGCA-211ENST00000514934 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
SGCA-211ENST00000514934 LITAFQ99732 161 aa8.36□□□□□ -1.07
SGCA-211ENST00000514934 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
SGCA-211ENST00000514934 NDUFC2O95298 119 aa8.35□□□□□ -1.07
SGCA-211ENST00000514934 SCGB1D4Q6XE38 83 aa8.35□□□□□ -1.07
SGCA-211ENST00000514934 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
SGCA-211ENST00000514934 PPDPFQ9H3Y8 114 aa8.35□□□□□ -1.07
SGCA-211ENST00000514934 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
SGCA-211ENST00000514934 C9orf118A6NHY6 69 aa8.34□□□□□ -1.07
SGCA-211ENST00000514934 A6NJY4 79 aa8.34□□□□□ -1.07
SGCA-211ENST00000514934 ETDCA0A1B0GVM5 59 aa8.33□□□□□ -1.08
SGCA-211ENST00000514934 Q6ZRX8 168 aa8.33□□□□□ -1.08
SGCA-211ENST00000514934 ZNF706Q9Y5V0 76 aaPredicted RBP8.33□□□□□ -1.08
SGCA-211ENST00000514934 GTF2H5Q6ZYL4 71 aa8.32□□□□□ -1.08
SGCA-211ENST00000514934 Q8NBF4 154 aa8.32□□□□□ -1.08
SGCA-211ENST00000514934 HIST1H4GQ99525 98 aa8.32□□□□□ -1.08
SGCA-211ENST00000514934 IFITM1P13164 125 aa8.31□□□□□ -1.08
SGCA-211ENST00000514934 SPAG11AQ6PDA7 123 aa8.31□□□□□ -1.08
SGCA-211ENST00000514934 CEND1Q8N111 149 aa8.31□□□□□ -1.08
SGCA-211ENST00000514934 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
SGCA-211ENST00000514934 SPANXDQ9BXN6 97 aa8.29□□□□□ -1.08
SGCA-211ENST00000514934 TTTY13Q9BZ97 58 aa8.29□□□□□ -1.08
SGCA-211ENST00000514934 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
SGCA-211ENST00000514934 NPC2P61916 151 aa8.28□□□□□ -1.08
SGCA-211ENST00000514934 LCE2AQ5TA79 106 aaPredicted RBP8.28□□□□□ -1.08
SGCA-211ENST00000514934 A0A1B0GWB2 263 aa8.27□□□□□ -1.09
SGCA-211ENST00000514934 GAGE2AQ6NT46 116 aa8.27□□□□□ -1.09
SGCA-211ENST00000514934 TRAV23DV6A0A075B6W5 121 aa8.26□□□□□ -1.09
SGCA-211ENST00000514934 K7EP34 96 aa8.26□□□□□ -1.09
SGCA-211ENST00000514934 FABP2P12104 132 aa8.26□□□□□ -1.09
SGCA-211ENST00000514934 FXYD2P54710 66 aa8.26□□□□□ -1.09
SGCA-211ENST00000514934 KRTAP13-3Q3SY46 172 aa8.26□□□□□ -1.09
SGCA-211ENST00000514934 LINC00308Q8TCZ7 52 aa8.26□□□□□ -1.09
SGCA-211ENST00000514934 A0A1W2PPM0 123 aa8.25□□□□□ -1.09
SGCA-211ENST00000514934 H3BUT2 72 aa8.25□□□□□ -1.09
SGCA-211ENST00000514934 ZNF73O43830 326 aaPredicted RBP8.25□□□□□ -1.09
SGCA-211ENST00000514934 FP248Q71RG6 208 aaPredicted RBP8.25□□□□□ -1.09
SGCA-211ENST00000514934 MOBPQ13875 183 aa8.24□□□□□ -1.09
SGCA-211ENST00000514934 SPINK1P00995 79 aa8.23□□□□□ -1.09
SGCA-211ENST00000514934 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
SGCA-211ENST00000514934 S100A7L2Q5SY68 101 aa8.23□□□□□ -1.09
SGCA-211ENST00000514934 Q8N377 158 aa8.23□□□□□ -1.09
SGCA-211ENST00000514934 ST20-AS1Q8NBB2 130 aa8.23□□□□□ -1.09
SGCA-211ENST00000514934 RAB37Q96AX2 223 aa8.23□□□□□ -1.09
SGCA-211ENST00000514934 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
SGCA-211ENST00000514934 SSBP3-AS1Q7Z2R9 100 aa8.22□□□□□ -1.09
SGCA-211ENST00000514934 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
SGCA-211ENST00000514934 SPCS1Q9Y6A9 102 aa8.22□□□□□ -1.09
SGCA-211ENST00000514934 IGLV9-49A0A0B4J1Y8 123 aa8.21□□□□□ -1.1
SGCA-211ENST00000514934 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
SGCA-211ENST00000514934 SPRR1BP22528 89 aa8.2□□□□□ -1.1
SGCA-211ENST00000514934 CBY1Q9Y3M2 126 aa8.2□□□□□ -1.1
SGCA-211ENST00000514934 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms