RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 NDUFC2-KCTD14E9PQ53 114 aa5.96□□□□□ -1.46
NEDD9-215ENST00000514660 TIMM17BO60830 172 aa5.96□□□□□ -1.46
NEDD9-215ENST00000514660 UBE2BP63146 152 aa5.96□□□□□ -1.46
NEDD9-215ENST00000514660 COX17Q14061 63 aa5.96□□□□□ -1.46
NEDD9-215ENST00000514660 GAGE2EQ4V326 116 aa5.96□□□□□ -1.46
NEDD9-215ENST00000514660 MEIG1Q5JSS6 88 aa5.96□□□□□ -1.46
NEDD9-215ENST00000514660 C2orf91Q6ZV80 131 aa5.96□□□□□ -1.46
NEDD9-215ENST00000514660 LINC00304Q8N9R0 145 aa5.96□□□□□ -1.46
NEDD9-215ENST00000514660 GAGE2DQ9UEU5 116 aa5.96□□□□□ -1.46
NEDD9-215ENST00000514660 LINC00587B1AMM8 73 aa5.95□□□□□ -1.46
NEDD9-215ENST00000514660 C9orf129Q5T035 196 aaKnown RBP5.95□□□□□ -1.46
NEDD9-215ENST00000514660 SCGB1D4Q6XE38 83 aa5.95□□□□□ -1.46
NEDD9-215ENST00000514660 DAND5Q8N907 189 aa5.95□□□□□ -1.46
NEDD9-215ENST00000514660 MIEN1Q9BRT3 115 aa5.95□□□□□ -1.46
NEDD9-215ENST00000514660 SOSTDC1Q6X4U4 206 aa5.94□□□□□ -1.46
NEDD9-215ENST00000514660 MIR7-3HGQ8N6C7 128 aa5.94□□□□□ -1.46
NEDD9-215ENST00000514660 SND1-IT1Q9HBX3 110 aa5.94□□□□□ -1.46
NEDD9-215ENST00000514660 HIGD1BQ9P298 99 aa5.94□□□□□ -1.46
NEDD9-215ENST00000514660 UQCR10Q9UDW1 63 aa5.94□□□□□ -1.46
NEDD9-215ENST00000514660 SSPOA2VEC9 5147 aa5.94□□□□□ -1.46
NEDD9-215ENST00000514660 LOC107984156A0A0G2JMH3 177 aa5.93□□□□□ -1.46
NEDD9-215ENST00000514660 CFC1BP0CG36 223 aa5.93□□□□□ -1.46
NEDD9-215ENST00000514660 ARL17AQ8IVW1 177 aa5.93□□□□□ -1.46
NEDD9-215ENST00000514660 XAGE1AQ9HD64 81 aa5.93□□□□□ -1.46
NEDD9-215ENST00000514660 SPANXB1Q9NS25 103 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-215ENST00000514660 MUSTN1Q8IVN3 82 aa5.92□□□□□ -1.46
NEDD9-215ENST00000514660 LINC00308Q8TCZ7 52 aa5.92□□□□□ -1.46
NEDD9-215ENST00000514660 SPANXDQ9BXN6 97 aa5.92□□□□□ -1.46
NEDD9-215ENST00000514660 SPANXCQ9NY87 97 aa5.92□□□□□ -1.46
NEDD9-215ENST00000514660 TMEM238C9JI98 176 aa5.91□□□□□ -1.46
NEDD9-215ENST00000514660 NPC2P61916 151 aa5.91□□□□□ -1.46
NEDD9-215ENST00000514660 Q8NDZ9 215 aa5.91□□□□□ -1.46
NEDD9-215ENST00000514660 Q6ZVH6 145 aa5.9□□□□□ -1.46
NEDD9-215ENST00000514660 TSTD3H0UI37 97 aa5.89□□□□□ -1.47
NEDD9-215ENST00000514660 IFITM1P13164 125 aa5.89□□□□□ -1.47
NEDD9-215ENST00000514660 SEC61BP60468 96 aaKnown RBP5.89□□□□□ -1.47
NEDD9-215ENST00000514660 HIST1H4GQ99525 98 aa5.89□□□□□ -1.47
NEDD9-215ENST00000514660 CTAG1AP78358 180 aa5.88□□□□□ -1.47
NEDD9-215ENST00000514660 TAL2Q16559 108 aa5.88□□□□□ -1.47
NEDD9-215ENST00000514660 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
NEDD9-215ENST00000514660 VPREB1P12018 145 aa5.87□□□□□ -1.47
NEDD9-215ENST00000514660 KRTAP13-1Q8IUC0 172 aa5.87□□□□□ -1.47
NEDD9-215ENST00000514660 CEND1Q8N111 149 aa5.87□□□□□ -1.47
NEDD9-215ENST00000514660 C3orf22Q8N5N4 141 aa5.87□□□□□ -1.47
NEDD9-215ENST00000514660 LINC00337Q8N6G1 96 aa5.87□□□□□ -1.47
NEDD9-215ENST00000514660 C22orf24Q9Y442 160 aa5.87□□□□□ -1.47
NEDD9-215ENST00000514660 USH2AO75445 5202 aa5.86□□□□□ -1.47
NEDD9-215ENST00000514660 IGLV5-37A0A075B6J1 123 aa5.86□□□□□ -1.47
NEDD9-215ENST00000514660 A4D1N5 150 aa5.86□□□□□ -1.47
NEDD9-215ENST00000514660 DDTP30046 118 aa5.86□□□□□ -1.47
NEDD9-215ENST00000514660 HSD52Q0P140 79 aa5.86□□□□□ -1.47
NEDD9-215ENST00000514660 IGKV2-28A0A075B6P5 120 aa5.85□□□□□ -1.47
NEDD9-215ENST00000514660 BCE1O60756 84 aa5.85□□□□□ -1.47
NEDD9-215ENST00000514660 NDUFC2O95298 119 aa5.85□□□□□ -1.47
NEDD9-215ENST00000514660 IGKV2D-28P01615 120 aa5.85□□□□□ -1.47
NEDD9-215ENST00000514660 RPL28P46779 137 aaKnown RBP5.85□□□□□ -1.47
NEDD9-215ENST00000514660 FXYD2P54710 66 aa5.85□□□□□ -1.47
NEDD9-215ENST00000514660 RPL24P83731 157 aaKnown RBP5.85□□□□□ -1.47
NEDD9-215ENST00000514660 FAM229BQ4G0N7 80 aa5.85□□□□□ -1.47
NEDD9-215ENST00000514660 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
NEDD9-215ENST00000514660 BVES-AS1Q5T3Y7 98 aa5.84□□□□□ -1.47
NEDD9-215ENST00000514660 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.47
NEDD9-215ENST00000514660 COPS9Q8WXC6 57 aa5.84□□□□□ -1.47
NEDD9-215ENST00000514660 M0R378 163 aa5.83□□□□□ -1.48
NEDD9-215ENST00000514660 NCR3O14931 201 aa5.83□□□□□ -1.48
NEDD9-215ENST00000514660 CFC1P0CG37 223 aa5.83□□□□□ -1.48
NEDD9-215ENST00000514660 LINC00167Q96N53 147 aa5.83□□□□□ -1.48
NEDD9-215ENST00000514660 TRBV10-2A0A0K0K1G8 114 aa5.82□□□□□ -1.48
NEDD9-215ENST00000514660 PCP4L1A6NKN8 68 aa5.82□□□□□ -1.48
NEDD9-215ENST00000514660 HINT1P49773 126 aaPredicted RBP5.82□□□□□ -1.48
NEDD9-215ENST00000514660 XP32Q5T750 250 aa5.82□□□□□ -1.48
NEDD9-215ENST00000514660 GAGE10A6NGK3 116 aa5.81□□□□□ -1.48
NEDD9-215ENST00000514660 KRTAP4-16G5E9R7 235 aaPredicted RBP5.81□□□□□ -1.48
NEDD9-215ENST00000514660 MRPL55Q7Z7F7 128 aaKnown RBP5.81□□□□□ -1.48
NEDD9-215ENST00000514660 NKAPP1Q8N9T2 125 aa5.81□□□□□ -1.48
NEDD9-215ENST00000514660 TRBV10-3A0A0K0K1G6 114 aa5.8□□□□□ -1.48
NEDD9-215ENST00000514660 C9orf118A6NHY6 69 aa5.8□□□□□ -1.48
NEDD9-215ENST00000514660 RPL37AP8A6NKH3 93 aa5.8□□□□□ -1.48
NEDD9-215ENST00000514660 IGLV6-57P01721 117 aa5.8□□□□□ -1.48
NEDD9-215ENST00000514660 LBHQ53QV2 105 aaPredicted RBP5.8□□□□□ -1.48
NEDD9-215ENST00000514660 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
NEDD9-215ENST00000514660 A0A1B0GWB2 263 aa5.79□□□□□ -1.48
NEDD9-215ENST00000514660 TRAV13-2A0A0B4J235 113 aa5.78□□□□□ -1.48
NEDD9-215ENST00000514660 A0A0B4J2C4 111 aa5.78□□□□□ -1.48
NEDD9-215ENST00000514660 A6NDN8 102 aa5.78□□□□□ -1.48
NEDD9-215ENST00000514660 M0R143 59 aa5.78□□□□□ -1.48
NEDD9-215ENST00000514660 OR13C6PQ8NH95 151 aa5.78□□□□□ -1.48
NEDD9-215ENST00000514660 NHP2Q9NX24 153 aaKnown RBP5.78□□□□□ -1.48
NEDD9-215ENST00000514660 K7ERJ3 54 aa5.77□□□□□ -1.49
NEDD9-215ENST00000514660 S100A7L2Q5SY68 101 aa5.77□□□□□ -1.49
NEDD9-215ENST00000514660 SNHG12Q9BXW3 62 aa5.77□□□□□ -1.49
NEDD9-215ENST00000514660 TMEM126AQ9H061 195 aa5.77□□□□□ -1.49
NEDD9-215ENST00000514660 KCNQ1DNQ9H478 68 aa5.77□□□□□ -1.49
NEDD9-215ENST00000514660 PRO1854Q9UHT4 67 aa5.77□□□□□ -1.49
NEDD9-215ENST00000514660 M0R2T5 61 aa5.76□□□□□ -1.49
NEDD9-215ENST00000514660 BATFQ16520 125 aa5.76□□□□□ -1.49
NEDD9-215ENST00000514660 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
NEDD9-215ENST00000514660 RAB37Q96AX2 223 aa5.76□□□□□ -1.49
NEDD9-215ENST00000514660 PRLHP81277 87 aa5.75□□□□□ -1.49
NEDD9-215ENST00000514660 PCOTHQ58A44 107 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms