RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 KCNQ1DNQ9H478 68 aa5.31□□□□□ -1.56
CPNE4-211ENST00000514439 DNAH9Q9NYC9 4486 aa5.3□□□□□ -1.56
CPNE4-211ENST00000514439 FAM168BA1KXE4 195 aa5.3□□□□□ -1.56
CPNE4-211ENST00000514439 PLA2G2DQ9UNK4 145 aa5.3□□□□□ -1.56
CPNE4-211ENST00000514439 COL7A1Q02388 2944 aa5.3□□□□□ -1.56
CPNE4-211ENST00000514439 B9D2Q9BPU9 175 aa5.3□□□□□ -1.56
CPNE4-211ENST00000514439 IGLV5-37A0A075B6J1 123 aa5.29□□□□□ -1.56
CPNE4-211ENST00000514439 DSCR8Q96T75 97 aa5.29□□□□□ -1.56
CPNE4-211ENST00000514439 APLNQ9ULZ1 77 aa5.29□□□□□ -1.56
CPNE4-211ENST00000514439 CCDC179H3BU77 68 aa5.29□□□□□ -1.56
CPNE4-211ENST00000514439 M0R2N4 97 aa5.29□□□□□ -1.56
CPNE4-211ENST00000514439 GHRHP01286 108 aa5.29□□□□□ -1.56
CPNE4-211ENST00000514439 KRTAP7-1Q8IUC3 87 aa5.29□□□□□ -1.56
CPNE4-211ENST00000514439 UBE2DNLQ8IWF7 75 aa5.29□□□□□ -1.56
CPNE4-211ENST00000514439 LOC107984640A0A0U1RRK4 108 aa5.28□□□□□ -1.56
CPNE4-211ENST00000514439 RPL37AP8A6NKH3 93 aa5.28□□□□□ -1.56
CPNE4-211ENST00000514439 LYSTQ99698 3801 aa5.28□□□□□ -1.56
CPNE4-211ENST00000514439 PDE6GP18545 87 aa5.28□□□□□ -1.56
CPNE4-211ENST00000514439 IGLV1-50A0A075B6I6 118 aa5.27□□□□□ -1.57
CPNE4-211ENST00000514439 TRBV7-4A0A0J9YYF1 115 aa5.27□□□□□ -1.57
CPNE4-211ENST00000514439 FAM19A5Q7Z5A7 132 aaPredicted RBP5.27□□□□□ -1.57
CPNE4-211ENST00000514439 UBL5Q9BZL1 73 aa5.27□□□□□ -1.57
CPNE4-211ENST00000514439 PRYO14603 147 aa5.26□□□□□ -1.57
CPNE4-211ENST00000514439 HIST1H4AP62805 103 aaKnown RBP5.26□□□□□ -1.57
CPNE4-211ENST00000514439 ATP5EP2Q5VTU8 51 aa5.26□□□□□ -1.57
CPNE4-211ENST00000514439 A0A087WVE0 104 aa5.26□□□□□ -1.57
CPNE4-211ENST00000514439 KRTAP4-16G5E9R7 235 aaPredicted RBP5.26□□□□□ -1.57
CPNE4-211ENST00000514439 PSCAO43653 123 aa5.26□□□□□ -1.57
CPNE4-211ENST00000514439 Q6ZRX8 168 aa5.26□□□□□ -1.57
CPNE4-211ENST00000514439 MRPL55Q7Z7F7 128 aaKnown RBP5.26□□□□□ -1.57
CPNE4-211ENST00000514439 SPRR1AP35321 89 aa5.25□□□□□ -1.57
CPNE4-211ENST00000514439 DYNC2H1Q8NCM8 4307 aaKnown RBP5.25□□□□□ -1.57
CPNE4-211ENST00000514439 B5MCH6 92 aa5.25□□□□□ -1.57
CPNE4-211ENST00000514439 CNBPP62633 177 aaKnown RBP5.25□□□□□ -1.57
CPNE4-211ENST00000514439 DNAH10Q8IVF4 4471 aa5.24□□□□□ -1.57
CPNE4-211ENST00000514439 ETDCA0A1B0GVM5 59 aa5.24□□□□□ -1.57
CPNE4-211ENST00000514439 Q9BRP9 147 aa5.24□□□□□ -1.57
CPNE4-211ENST00000514439 DHRS4-AS1Q9P1J3 65 aa5.24□□□□□ -1.57
CPNE4-211ENST00000514439 A0A096LNI7 61 aa5.24□□□□□ -1.57
CPNE4-211ENST00000514439 DEFB105AQ8NG35 78 aa5.24□□□□□ -1.57
CPNE4-211ENST00000514439 Q6ZVQ6 151 aa5.23□□□□□ -1.57
CPNE4-211ENST00000514439 Q8N377 158 aa5.23□□□□□ -1.57
CPNE4-211ENST00000514439 IGKV2-24A0A0C4DH68 120 aa5.23□□□□□ -1.57
CPNE4-211ENST00000514439 NUPR2A6NF83 97 aa5.23□□□□□ -1.57
CPNE4-211ENST00000514439 C16orf90A8MZG2 172 aa5.23□□□□□ -1.57
CPNE4-211ENST00000514439 ATOX1O00244 68 aa5.23□□□□□ -1.57
CPNE4-211ENST00000514439 LINC01547P58512 204 aaPredicted RBP5.23□□□□□ -1.57
CPNE4-211ENST00000514439 FAM19A1Q7Z5A9 133 aa5.23□□□□□ -1.57
CPNE4-211ENST00000514439 CSMD3Q7Z407 3707 aa5.23□□□□□ -1.57
CPNE4-211ENST00000514439 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.22□□□□□ -1.57
CPNE4-211ENST00000514439 HAMPP81172 84 aa5.21□□□□□ -1.58
CPNE4-211ENST00000514439 C14orf177Q52M58 125 aa5.21□□□□□ -1.58
CPNE4-211ENST00000514439 REG3GQ6UW15 175 aa5.21□□□□□ -1.58
CPNE4-211ENST00000514439 DNAH7Q8WXX0 4024 aa5.2□□□□□ -1.58
CPNE4-211ENST00000514439 NBDYA0A0U1RRE5 68 aa5.2□□□□□ -1.58
CPNE4-211ENST00000514439 A0A1W2PNN7 141 aa5.2□□□□□ -1.58
CPNE4-211ENST00000514439 C3orf22Q8N5N4 141 aa5.2□□□□□ -1.58
CPNE4-211ENST00000514439 ST20-AS1Q8NBB2 130 aa5.2□□□□□ -1.58
CPNE4-211ENST00000514439 ERC2-IT1O76042 136 aa5.2□□□□□ -1.58
CPNE4-211ENST00000514439 TENM2Q9NT68 2774 aa5.2□□□□□ -1.58
CPNE4-211ENST00000514439 IGLV5-48A0A075B6I7 105 aa5.19□□□□□ -1.58
CPNE4-211ENST00000514439 UQCRQO14949 82 aa5.19□□□□□ -1.58
CPNE4-211ENST00000514439 COX7CP15954 63 aa5.19□□□□□ -1.58
CPNE4-211ENST00000514439 UBE2BP63146 152 aa5.19□□□□□ -1.58
CPNE4-211ENST00000514439 SS18L2Q9UHA2 77 aa5.19□□□□□ -1.58
CPNE4-211ENST00000514439 PLECQ15149 4684 aaKnown RBP5.19□□□□□ -1.58
CPNE4-211ENST00000514439 LRCOL1A6NCL2 159 aa5.19□□□□□ -1.58
CPNE4-211ENST00000514439 CHTF8P0CG12 524 aa5.18□□□□□ -1.58
CPNE4-211ENST00000514439 CXCL6P80162 114 aa5.18□□□□□ -1.58
CPNE4-211ENST00000514439 PRKDCP78527 4128 aaKnown RBP5.18□□□□□ -1.58
CPNE4-211ENST00000514439 TNP2Q05952 138 aa5.18□□□□□ -1.58
CPNE4-211ENST00000514439 C9orf153Q5TBE3 101 aa5.18□□□□□ -1.58
CPNE4-211ENST00000514439 Q6ZRN7 208 aaPredicted RBP5.18□□□□□ -1.58
CPNE4-211ENST00000514439 SCXQ7RTU7 201 aa5.17□□□□□ -1.58
CPNE4-211ENST00000514439 PRLHP81277 87 aa5.17□□□□□ -1.58
CPNE4-211ENST00000514439 SERP2Q8N6R1 65 aa5.17□□□□□ -1.58
CPNE4-211ENST00000514439 C9orf163Q8N9P6 203 aa5.17□□□□□ -1.58
CPNE4-211ENST00000514439 C3orf84H3BNL1 204 aa5.16□□□□□ -1.58
CPNE4-211ENST00000514439 C1orf137Q5JT78 98 aa5.15□□□□□ -1.58
CPNE4-211ENST00000514439 PHF5AQ7RTV0 110 aaKnown RBP5.15□□□□□ -1.58
CPNE4-211ENST00000514439 STARD9Q9P2P6 4700 aa5.15□□□□□ -1.59
CPNE4-211ENST00000514439 KRTAP11-1Q8IUC1 163 aa5.15□□□□□ -1.59
CPNE4-211ENST00000514439 A0A1W2PNM2 257 aa5.14□□□□□ -1.59
CPNE4-211ENST00000514439 FUSP35637 526 aaKnown RBP eCLIP5.14□□□□□ -1.59
CPNE4-211ENST00000514439 NREPQ16612 68 aa5.14□□□□□ -1.59
CPNE4-211ENST00000514439 CRYGAP11844 174 aa5.14□□□□□ -1.59
CPNE4-211ENST00000514439 SMIM29Q86T20 159 aa5.14□□□□□ -1.59
CPNE4-211ENST00000514439 MEGF8Q7Z7M0 2845 aa5.13□□□□□ -1.59
CPNE4-211ENST00000514439 Q8NBF4 154 aa5.13□□□□□ -1.59
CPNE4-211ENST00000514439 HIGD2AQ9BW72 106 aa5.13□□□□□ -1.59
CPNE4-211ENST00000514439 PKIGQ9Y2B9 76 aa5.13□□□□□ -1.59
CPNE4-211ENST00000514439 VPS13DQ5THJ4 4388 aa5.13□□□□□ -1.59
CPNE4-211ENST00000514439 PANO1I0J062 215 aa5.13□□□□□ -1.59
CPNE4-211ENST00000514439 A0A1B0GW54 56 aa5.12□□□□□ -1.59
CPNE4-211ENST00000514439 Q8N9L7 120 aa5.12□□□□□ -1.59
CPNE4-211ENST00000514439 CYSTM1Q9H1C7 97 aa5.12□□□□□ -1.59
CPNE4-211ENST00000514439 LINC00474Q9P2X8 69 aa5.12□□□□□ -1.59
CPNE4-211ENST00000514439 EPM2AB3EWF7 344 aa5.11□□□□□ -1.59
CPNE4-211ENST00000514439 F8WEM9 126 aa5.11□□□□□ -1.59
CPNE4-211ENST00000514439 LINC00476Q8WZB0 136 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms