RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 FSHBP01225 129 aa7.72□□□□□ -1.17
TCOF1-211ENST00000513346 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
TCOF1-211ENST00000513346 LYPD5Q6UWN5 251 aa7.72□□□□□ -1.17
TCOF1-211ENST00000513346 A0A1B0GW54 56 aa7.72□□□□□ -1.17
TCOF1-211ENST00000513346 ADGRG4Q8IZF6 3080 aa7.72□□□□□ -1.17
TCOF1-211ENST00000513346 NBEAQ8NFP9 2946 aa7.71□□□□□ -1.18
TCOF1-211ENST00000513346 ELOF1P60002 83 aaKnown RBP7.71□□□□□ -1.18
TCOF1-211ENST00000513346 KIAA0087Q14695 138 aa7.71□□□□□ -1.18
TCOF1-211ENST00000513346 ZNF706Q9Y5V0 76 aaPredicted RBP7.7□□□□□ -1.18
TCOF1-211ENST00000513346 A0A087WSZ3 146 aa7.69□□□□□ -1.18
TCOF1-211ENST00000513346 DEFB116Q30KQ4 102 aa7.68□□□□□ -1.18
TCOF1-211ENST00000513346 SPINK6Q6UWN8 80 aa7.68□□□□□ -1.18
TCOF1-211ENST00000513346 Q6ZRU5 148 aa7.68□□□□□ -1.18
TCOF1-211ENST00000513346 PCOTHQ58A44 107 aa7.67□□□□□ -1.18
TCOF1-211ENST00000513346 OBSCN-AS1Q96MR7 158 aa7.67□□□□□ -1.18
TCOF1-211ENST00000513346 ITPR1Q14643 2758 aa7.67□□□□□ -1.18
TCOF1-211ENST00000513346 C1orf64Q8NEQ6 169 aa7.67□□□□□ -1.18
TCOF1-211ENST00000513346 REG3GQ6UW15 175 aa7.66□□□□□ -1.18
TCOF1-211ENST00000513346 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
TCOF1-211ENST00000513346 IGLV9-49A0A0B4J1Y8 123 aa7.65□□□□□ -1.18
TCOF1-211ENST00000513346 IGLV6-57P01721 117 aa7.65□□□□□ -1.19
TCOF1-211ENST00000513346 IGLV5-52A0A0A0MRZ9 124 aa7.64□□□□□ -1.19
TCOF1-211ENST00000513346 Q5XG85 94 aa7.64□□□□□ -1.19
TCOF1-211ENST00000513346 A8MUN3 132 aa7.63□□□□□ -1.19
TCOF1-211ENST00000513346 Q8NBF4 154 aa7.63□□□□□ -1.19
TCOF1-211ENST00000513346 LINC00167Q96N53 147 aa7.63□□□□□ -1.19
TCOF1-211ENST00000513346 LOC400499M0QZD8 3231 aa7.63□□□□□ -1.19
TCOF1-211ENST00000513346 C1orf134Q5TEV5 83 aa7.63□□□□□ -1.19
TCOF1-211ENST00000513346 H3BPC8 53 aa7.62□□□□□ -1.19
TCOF1-211ENST00000513346 NSD1Q96L73 2696 aaPredicted RBP7.62□□□□□ -1.19
TCOF1-211ENST00000513346 CD164Q04900 197 aa7.61□□□□□ -1.19
TCOF1-211ENST00000513346 Q9BRP9 147 aa7.61□□□□□ -1.19
TCOF1-211ENST00000513346 A0A096LNT2 108 aa7.61□□□□□ -1.19
TCOF1-211ENST00000513346 CYSTM1Q9H1C7 97 aa7.61□□□□□ -1.19
TCOF1-211ENST00000513346 X6R8D5 127 aa7.61□□□□□ -1.19
TCOF1-211ENST00000513346 TRBV7-4A0A0J9YYF1 115 aa7.6□□□□□ -1.19
TCOF1-211ENST00000513346 GVQW2A0A096LPI5 108 aaPredicted RBP7.58□□□□□ -1.2
TCOF1-211ENST00000513346 LINC01556Q5JQF7 62 aa7.58□□□□□ -1.2
TCOF1-211ENST00000513346 WWC2-AS2Q96NR7 200 aa7.58□□□□□ -1.2
TCOF1-211ENST00000513346 FAM104AQ969W3 186 aa7.58□□□□□ -1.2
TCOF1-211ENST00000513346 CYP4F30PQ9H0H9 118 aa7.58□□□□□ -1.2
TCOF1-211ENST00000513346 TRAV22A0A0B4J277 110 aa7.57□□□□□ -1.2
TCOF1-211ENST00000513346 K7ERS5 55 aa7.56□□□□□ -1.2
TCOF1-211ENST00000513346 MDFIQ99750 246 aa7.56□□□□□ -1.2
TCOF1-211ENST00000513346 C22orf24Q9Y442 160 aa7.56□□□□□ -1.2
TCOF1-211ENST00000513346 SPAG11AQ6PDA7 123 aa7.56□□□□□ -1.2
TCOF1-211ENST00000513346 IGHV6-1A0A0B4J1U7 121 aa7.55□□□□□ -1.2
TCOF1-211ENST00000513346 VPREB1P12018 145 aa7.55□□□□□ -1.2
TCOF1-211ENST00000513346 Q6ZRX8 168 aa7.55□□□□□ -1.2
TCOF1-211ENST00000513346 HIVEP1P15822 2718 aa7.55□□□□□ -1.2
TCOF1-211ENST00000513346 H3BNG1 76 aa7.54□□□□□ -1.2
TCOF1-211ENST00000513346 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
TCOF1-211ENST00000513346 K7EQZ3 153 aa7.53□□□□□ -1.2
TCOF1-211ENST00000513346 PRR15Q8IV56 129 aa7.53□□□□□ -1.2
TCOF1-211ENST00000513346 CIRBP-AS1Q8TBR5 109 aa7.53□□□□□ -1.2
TCOF1-211ENST00000513346 TP53AIP1Q9HCN2 124 aa7.53□□□□□ -1.2
TCOF1-211ENST00000513346 CRYBG3Q68DQ2 2970 aa7.53□□□□□ -1.2
TCOF1-211ENST00000513346 Q8NAQ8 132 aa7.53□□□□□ -1.2
TCOF1-211ENST00000513346 LINC00476Q8WZB0 136 aa7.53□□□□□ -1.2
TCOF1-211ENST00000513346 UTP20O75691 2785 aaKnown RBP7.53□□□□□ -1.2
TCOF1-211ENST00000513346 PRLHP81277 87 aa7.52□□□□□ -1.21
TCOF1-211ENST00000513346 KRTAP1-3Q8IUG1 177 aa7.52□□□□□ -1.21
TCOF1-211ENST00000513346 ASPMQ8IZT6 3477 aa7.52□□□□□ -1.21
TCOF1-211ENST00000513346 OXTP01178 125 aa7.51□□□□□ -1.21
TCOF1-211ENST00000513346 ATP11AUNQ6ZP68 121 aa7.51□□□□□ -1.21
TCOF1-211ENST00000513346 FP248Q71RG6 208 aaPredicted RBP7.51□□□□□ -1.21
TCOF1-211ENST00000513346 ST20-AS1Q8NBB2 130 aa7.5□□□□□ -1.21
TCOF1-211ENST00000513346 LRBAP50851 2863 aa7.5□□□□□ -1.21
TCOF1-211ENST00000513346 KTN1-AS1Q86SY8 53 aa7.5□□□□□ -1.21
TCOF1-211ENST00000513346 NIPBLQ6KC79 2804 aaeCLIP7.48□□□□□ -1.213e-7■■■■■ 27.8
TCOF1-211ENST00000513346 COA5Q86WW8 74 aa7.48□□□□□ -1.21
TCOF1-211ENST00000513346 OCR1Q9BZK8 76 aa7.48□□□□□ -1.21
TCOF1-211ENST00000513346 Q1T7F1 81 aa7.47□□□□□ -1.21
TCOF1-211ENST00000513346 LOC101927531A0A1B0GV80 90 aa7.47□□□□□ -1.21
TCOF1-211ENST00000513346 RPL37AP61513 92 aaKnown RBP7.47□□□□□ -1.21
TCOF1-211ENST00000513346 TENM4Q6N022 2769 aa7.47□□□□□ -1.21
TCOF1-211ENST00000513346 KRTAP1-1Q07627 177 aa7.47□□□□□ -1.21
TCOF1-211ENST00000513346 ZANQ9Y493 2812 aa7.46□□□□□ -1.21
TCOF1-211ENST00000513346 Q6ZRP5 223 aa7.46□□□□□ -1.22
TCOF1-211ENST00000513346 KCNQ1DNQ9H478 68 aa7.46□□□□□ -1.22
TCOF1-211ENST00000513346 DCHS1Q96JQ0 3298 aa7.45□□□□□ -1.22
TCOF1-211ENST00000513346 A0A1B0GU69 56 aa7.45□□□□□ -1.22
TCOF1-211ENST00000513346 Q8N377 158 aa7.45□□□□□ -1.22
TCOF1-211ENST00000513346 CSNK1G2-AS1Q8NCQ2 148 aa7.45□□□□□ -1.22
TCOF1-211ENST00000513346 LINC00588Q9Y4M8 146 aa7.45□□□□□ -1.22
TCOF1-211ENST00000513346 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
TCOF1-211ENST00000513346 ACYP2P14621 99 aa7.44□□□□□ -1.22
TCOF1-211ENST00000513346 APCP25054 2843 aa7.44□□□□□ -1.22
TCOF1-211ENST00000513346 NBDYA0A0U1RRE5 68 aa7.43□□□□□ -1.22
TCOF1-211ENST00000513346 EPM2AB3EWF7 344 aa7.43□□□□□ -1.22
TCOF1-211ENST00000513346 C8orf87E5RJ46 101 aa7.43□□□□□ -1.22
TCOF1-211ENST00000513346 GIG44P09565 113 aaPredicted RBP7.43□□□□□ -1.22
TCOF1-211ENST00000513346 C7orf65Q6ZTY9 151 aa7.43□□□□□ -1.22
TCOF1-211ENST00000513346 NBEAL2Q6ZNJ1 2754 aa7.42□□□□□ -1.22
TCOF1-211ENST00000513346 K7EIL1 84 aa7.42□□□□□ -1.22
TCOF1-211ENST00000513346 C19orf73Q9NVV2 129 aa7.42□□□□□ -1.22
TCOF1-211ENST00000513346 A8MWP4 228 aa7.42□□□□□ -1.22
TCOF1-211ENST00000513346 PRR34Q9NV39 138 aa7.41□□□□□ -1.22
TCOF1-211ENST00000513346 FAM229BQ4G0N7 80 aa7.41□□□□□ -1.22
TCOF1-211ENST00000513346 KRTAP10-3P60369 221 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms