RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 SPANXCQ9NY87 97 aa10.37□□□□□ -0.75
DDR1-272ENST00000513243 ZNF706Q9Y5V0 76 aaPredicted RBP10.36□□□□□ -0.75
DDR1-272ENST00000513243 TRAV23DV6A0A075B6W5 121 aa10.35□□□□□ -0.75
DDR1-272ENST00000513243 SCGB1D4Q6XE38 83 aa10.35□□□□□ -0.75
DDR1-272ENST00000513243 PCP2Q8IVA1 136 aa10.35□□□□□ -0.75
DDR1-272ENST00000513243 ERC2-IT1O76042 136 aa10.34□□□□□ -0.75
DDR1-272ENST00000513243 S100A6P06703 90 aa10.34□□□□□ -0.75
DDR1-272ENST00000513243 Q6ZRX8 168 aa10.34□□□□□ -0.75
DDR1-272ENST00000513243 C3orf22Q8N5N4 141 aa10.34□□□□□ -0.75
DDR1-272ENST00000513243 Q9BRP9 147 aa10.34□□□□□ -0.75
DDR1-272ENST00000513243 ZNF73O43830 326 aaPredicted RBP10.32□□□□□ -0.76
DDR1-272ENST00000513243 SNRPEP62304 92 aaKnown RBP10.32□□□□□ -0.76
DDR1-272ENST00000513243 LINC00304Q8N9R0 145 aa10.32□□□□□ -0.76
DDR1-272ENST00000513243 SPANXDQ9BXN6 97 aa10.32□□□□□ -0.76
DDR1-272ENST00000513243 PRR4Q16378 134 aa10.31□□□□□ -0.76
DDR1-272ENST00000513243 OR13C6PQ8NH95 151 aa10.31□□□□□ -0.76
DDR1-272ENST00000513243 PPDPFQ9H3Y8 114 aa10.31□□□□□ -0.76
DDR1-272ENST00000513243 LINC00483Q53H64 154 aa10.29□□□□□ -0.76
DDR1-272ENST00000513243 GAGE2AQ6NT46 116 aa10.29□□□□□ -0.76
DDR1-272ENST00000513243 CBY1Q9Y3M2 126 aa10.29□□□□□ -0.76
DDR1-272ENST00000513243 JOSD1Q15040 202 aaPredicted RBP10.28□□□□□ -0.76
DDR1-272ENST00000513243 LINC00518Q8N0U6 118 aa10.28□□□□□ -0.76
DDR1-272ENST00000513243 IFITM1P13164 125 aa10.27□□□□□ -0.77
DDR1-272ENST00000513243 C5orf52A6NGY3 159 aa10.26□□□□□ -0.77
DDR1-272ENST00000513243 Q6ZVH6 145 aa10.26□□□□□ -0.77
DDR1-272ENST00000513243 LPAP08519 4548 aa10.26□□□□□ -0.77
DDR1-272ENST00000513243 HSBP1L1C9JCN9 74 aa10.25□□□□□ -0.77
DDR1-272ENST00000513243 HINT1P49773 126 aaPredicted RBP10.25□□□□□ -0.77
DDR1-272ENST00000513243 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
DDR1-272ENST00000513243 COPS9Q8WXC6 57 aa10.25□□□□□ -0.77
DDR1-272ENST00000513243 CTAG1AP78358 180 aa10.23□□□□□ -0.77
DDR1-272ENST00000513243 SPAG11AQ6PDA7 123 aa10.22□□□□□ -0.77
DDR1-272ENST00000513243 ST20-AS1Q8NBB2 130 aa10.22□□□□□ -0.77
DDR1-272ENST00000513243 Q8NBF4 154 aa10.22□□□□□ -0.77
DDR1-272ENST00000513243 RETNLBQ9BQ08 111 aa10.22□□□□□ -0.77
DDR1-272ENST00000513243 SCGB1D1O95968 90 aa10.21□□□□□ -0.77
DDR1-272ENST00000513243 C6orf99Q4VX62 202 aa10.21□□□□□ -0.77
DDR1-272ENST00000513243 IGLV9-49A0A0B4J1Y8 123 aa10.19□□□□□ -0.78
DDR1-272ENST00000513243 A6NDN8 102 aa10.19□□□□□ -0.78
DDR1-272ENST00000513243 COX7BP24311 80 aa10.18□□□□□ -0.78
DDR1-272ENST00000513243 ELOF1P60002 83 aaKnown RBP10.18□□□□□ -0.78
DDR1-272ENST00000513243 MOBPQ13875 183 aa10.18□□□□□ -0.78
DDR1-272ENST00000513243 C4orf48Q5BLP8 95 aa10.18□□□□□ -0.78
DDR1-272ENST00000513243 DHRS4-AS1Q9P1J3 65 aa10.18□□□□□ -0.78
DDR1-272ENST00000513243 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
DDR1-272ENST00000513243 TRAV13-2A0A0B4J235 113 aa10.14□□□□□ -0.79
DDR1-272ENST00000513243 TRBV7-6A0A0J9YX20 115 aa10.14□□□□□ -0.79
DDR1-272ENST00000513243 SPRR1BP22528 89 aa10.13□□□□□ -0.79
DDR1-272ENST00000513243 SPINK1P00995 79 aa10.12□□□□□ -0.79
DDR1-272ENST00000513243 COX8AP10176 69 aa10.12□□□□□ -0.79
DDR1-272ENST00000513243 IGLV7-46A0A075B6I9 117 aa10.11□□□□□ -0.79
DDR1-272ENST00000513243 A0A1B0GWB2 263 aa10.11□□□□□ -0.79
DDR1-272ENST00000513243 A4D1N5 150 aa10.11□□□□□ -0.79
DDR1-272ENST00000513243 C9orf153Q5TBE3 101 aa10.11□□□□□ -0.79
DDR1-272ENST00000513243 SMIM11BQ8TCY0 68 aa10.11□□□□□ -0.79
DDR1-272ENST00000513243 DLEU1O43261 78 aa10.08□□□□□ -0.8
DDR1-272ENST00000513243 RNF213Q63HN8 5207 aa10.08□□□□□ -0.8
DDR1-272ENST00000513243 TAL2Q16559 108 aa10.07□□□□□ -0.8
DDR1-272ENST00000513243 SLC25A34Q6PIV7 304 aa10.07□□□□□ -0.8
DDR1-272ENST00000513243 DEFB105AQ8NG35 78 aa10.07□□□□□ -0.8
DDR1-272ENST00000513243 C14orf144Q96I85 54 aa10.07□□□□□ -0.8
DDR1-272ENST00000513243 HIST1H4GQ99525 98 aa10.06□□□□□ -0.8
DDR1-272ENST00000513243 PAM16Q9Y3D7 125 aa10.06□□□□□ -0.8
DDR1-272ENST00000513243 RPS29P62273 56 aaKnown RBP10.05□□□□□ -0.8
DDR1-272ENST00000513243 TPRXLQ17RH7 258 aa10.05□□□□□ -0.8
DDR1-272ENST00000513243 SPATA45Q537H7 98 aa10.05□□□□□ -0.8
DDR1-272ENST00000513243 LAMTOR3Q9UHA4 124 aa10.05□□□□□ -0.8
DDR1-272ENST00000513243 TEX49A0A1B0GTD5 131 aa10.04□□□□□ -0.8
DDR1-272ENST00000513243 FP248Q71RG6 208 aaPredicted RBP10.04□□□□□ -0.8
DDR1-272ENST00000513243 LINC01547P58512 204 aaPredicted RBP10.03□□□□□ -0.8
DDR1-272ENST00000513243 Q1RN00 199 aa10.03□□□□□ -0.8
DDR1-272ENST00000513243 Q8N377 158 aa10.03□□□□□ -0.8
DDR1-272ENST00000513243 C12orf57Q99622 126 aa10.03□□□□□ -0.8
DDR1-272ENST00000513243 VAMP8Q9BV40 100 aa10.03□□□□□ -0.8
DDR1-272ENST00000513243 IGLV5-48A0A075B6I7 105 aa10.02□□□□□ -0.81
DDR1-272ENST00000513243 VAMP3Q15836 100 aa10.01□□□□□ -0.81
DDR1-272ENST00000513243 CDIP1Q9H305 208 aa10.01□□□□□ -0.81
DDR1-272ENST00000513243 SMIM29Q86T20 159 aa10□□□□□ -0.81
DDR1-272ENST00000513243 NHP2Q9NX24 153 aaKnown RBP10□□□□□ -0.81
DDR1-272ENST00000513243 HIGD1BQ9P298 99 aa10□□□□□ -0.81
DDR1-272ENST00000513243 SLC25A20O43772 301 aa9.99□□□□□ -0.81
DDR1-272ENST00000513243 LINC00575Q6W349 94 aa9.98□□□□□ -0.81
DDR1-272ENST00000513243 C2orf91Q6ZV80 131 aa9.98□□□□□ -0.81
DDR1-272ENST00000513243 HRCT1Q6UXD1 115 aa9.96□□□□□ -0.82
DDR1-272ENST00000513243 CFC1BP0CG36 223 aa9.95□□□□□ -0.82
DDR1-272ENST00000513243 CFC1P0CG37 223 aa9.95□□□□□ -0.82
DDR1-272ENST00000513243 KRTAP13-3Q3SY46 172 aa9.95□□□□□ -0.82
DDR1-272ENST00000513243 PYY3Q5JQD4 70 aa9.95□□□□□ -0.82
DDR1-272ENST00000513243 PRO1933Q9H354 126 aa9.95□□□□□ -0.82
DDR1-272ENST00000513243 TMA7Q9Y2S6 64 aaKnown RBP9.95□□□□□ -0.82
DDR1-272ENST00000513243 hADV29S1A0JD25 119 aa9.93□□□□□ -0.82
DDR1-272ENST00000513243 H7C2G1 150 aa9.92□□□□□ -0.82
DDR1-272ENST00000513243 A0A0G2JQZ4 141 aa9.91□□□□□ -0.82
DDR1-272ENST00000513243 CD164Q04900 197 aa9.91□□□□□ -0.82
DDR1-272ENST00000513243 BVES-AS1Q5T3Y7 98 aa9.91□□□□□ -0.82
DDR1-272ENST00000513243 Q6ZQY7 126 aa9.91□□□□□ -0.82
DDR1-272ENST00000513243 RAB37Q96AX2 223 aa9.91□□□□□ -0.82
DDR1-272ENST00000513243 CEND1Q8N111 149 aa9.9□□□□□ -0.82
DDR1-272ENST00000513243 LIMD2Q9BT23 127 aa9.9□□□□□ -0.82
DDR1-272ENST00000513243 A0A0B4J2C4 111 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms