RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 C3orf22Q8N5N4 141 aa3.95□□□□□ -1.78
RFC1-215ENST00000512881 IGLV7-46A0A075B6I9 117 aa3.94□□□□□ -1.78
RFC1-215ENST00000512881 LINC00587B1AMM8 73 aa3.94□□□□□ -1.78
RFC1-215ENST00000512881 HSBP1O75506 76 aa3.94□□□□□ -1.78
RFC1-215ENST00000512881 LINC01547P58512 204 aaPredicted RBP3.94□□□□□ -1.78
RFC1-215ENST00000512881 HERV-K104P63124 156 aa3.94□□□□□ -1.78
RFC1-215ENST00000512881 MEIG1Q5JSS6 88 aa3.94□□□□□ -1.78
RFC1-215ENST00000512881 MIR7-3HGQ8N6C7 128 aa3.94□□□□□ -1.78
RFC1-215ENST00000512881 SPRR4Q96PI1 79 aa3.94□□□□□ -1.78
RFC1-215ENST00000512881 KCNQ1DNQ9H478 68 aa3.94□□□□□ -1.78
RFC1-215ENST00000512881 NDUFA12Q9UI09 145 aa3.94□□□□□ -1.78
RFC1-215ENST00000512881 A0A0U1RQV1 116 aa3.93□□□□□ -1.78
RFC1-215ENST00000512881 MYMXA0A1B0GTQ4 84 aa3.93□□□□□ -1.78
RFC1-215ENST00000512881 NCR3O14931 201 aa3.93□□□□□ -1.78
RFC1-215ENST00000512881 SPAG11AQ6PDA7 123 aa3.93□□□□□ -1.78
RFC1-215ENST00000512881 LINC00337Q8N6G1 96 aa3.93□□□□□ -1.78
RFC1-215ENST00000512881 SMCR5Q8TEV8 140 aa3.93□□□□□ -1.78
RFC1-215ENST00000512881 ZNF706Q9Y5V0 76 aaPredicted RBP3.93□□□□□ -1.78
RFC1-215ENST00000512881 TRBV10-3A0A0K0K1G6 114 aa3.92□□□□□ -1.78
RFC1-215ENST00000512881 ETDCA0A1B0GVM5 59 aa3.92□□□□□ -1.78
RFC1-215ENST00000512881 H0Y8G0 127 aa3.92□□□□□ -1.78
RFC1-215ENST00000512881 TRGC2P03986 189 aa3.92□□□□□ -1.78
RFC1-215ENST00000512881 SPRR1AP35321 89 aa3.92□□□□□ -1.78
RFC1-215ENST00000512881 TPRXLQ17RH7 258 aa3.92□□□□□ -1.78
RFC1-215ENST00000512881 MAP1LC3CQ9BXW4 147 aa3.92□□□□□ -1.78
RFC1-215ENST00000512881 KRTAP4-16G5E9R7 235 aaPredicted RBP3.91□□□□□ -1.78
RFC1-215ENST00000512881 LEPROTO15243 131 aa3.91□□□□□ -1.78
RFC1-215ENST00000512881 LEPROTL1O95214 131 aa3.91□□□□□ -1.78
RFC1-215ENST00000512881 TSPEAR-AS2P59090 65 aa3.91□□□□□ -1.78
RFC1-215ENST00000512881 PPDPFQ9H3Y8 114 aa3.91□□□□□ -1.78
RFC1-215ENST00000512881 LOC107984156A0A0G2JMH3 177 aa3.9□□□□□ -1.79
RFC1-215ENST00000512881 J3QQQ9 107 aa3.9□□□□□ -1.79
RFC1-215ENST00000512881 SERF1AO75920 110 aa3.9□□□□□ -1.79
RFC1-215ENST00000512881 FABP4P15090 132 aa3.9□□□□□ -1.79
RFC1-215ENST00000512881 PLNP26678 52 aa3.9□□□□□ -1.79
RFC1-215ENST00000512881 S100A12P80511 92 aa3.9□□□□□ -1.79
RFC1-215ENST00000512881 ARL17AQ8IVW1 177 aa3.9□□□□□ -1.79
RFC1-215ENST00000512881 DAND5Q8N907 189 aa3.9□□□□□ -1.79
RFC1-215ENST00000512881 Q8NBF4 154 aa3.9□□□□□ -1.79
RFC1-215ENST00000512881 HSPB8Q9UJY1 196 aa3.9□□□□□ -1.79
RFC1-215ENST00000512881 TRBV10-2A0A0K0K1G8 114 aa3.89□□□□□ -1.79
RFC1-215ENST00000512881 ERC2-IT1O76042 136 aa3.89□□□□□ -1.79
RFC1-215ENST00000512881 DPM2O94777 84 aa3.89□□□□□ -1.79
RFC1-215ENST00000512881 DDTP30046 118 aa3.89□□□□□ -1.79
RFC1-215ENST00000512881 LINC00483Q53H64 154 aa3.89□□□□□ -1.79
RFC1-215ENST00000512881 GAGE2AQ6NT46 116 aa3.89□□□□□ -1.79
RFC1-215ENST00000512881 PMCHL2Q9BQD1 86 aa3.89□□□□□ -1.79
RFC1-215ENST00000512881 SPINK1P00995 79 aa3.88□□□□□ -1.79
RFC1-215ENST00000512881 IGKCP01834 107 aa3.88□□□□□ -1.79
RFC1-215ENST00000512881 LGALS3P17931 250 aaKnown RBP3.88□□□□□ -1.79
RFC1-215ENST00000512881 NMUP48645 174 aa3.88□□□□□ -1.79
RFC1-215ENST00000512881 HERVK_113P61574 105 aa3.88□□□□□ -1.79
RFC1-215ENST00000512881 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
RFC1-215ENST00000512881 FP248Q71RG6 208 aaPredicted RBP3.88□□□□□ -1.79
RFC1-215ENST00000512881 SPANXB1Q9NS25 103 aaPredicted RBP3.88□□□□□ -1.79
RFC1-215ENST00000512881 COLCA2A8K830 154 aa3.87□□□□□ -1.79
RFC1-215ENST00000512881 NDUFC2O95298 119 aa3.87□□□□□ -1.79
RFC1-215ENST00000512881 IGLV6-57P01721 117 aa3.87□□□□□ -1.79
RFC1-215ENST00000512881 S100A7L2Q5SY68 101 aa3.87□□□□□ -1.79
RFC1-215ENST00000512881 SSBP3-AS1Q7Z2R9 100 aa3.87□□□□□ -1.79
RFC1-215ENST00000512881 LITAFQ99732 161 aa3.87□□□□□ -1.79
RFC1-215ENST00000512881 Q9BRP9 147 aa3.87□□□□□ -1.79
RFC1-215ENST00000512881 MIEN1Q9BRT3 115 aa3.87□□□□□ -1.79
RFC1-215ENST00000512881 IGLV9-49A0A0B4J1Y8 123 aa3.86□□□□□ -1.79
RFC1-215ENST00000512881 MOBPQ13875 183 aa3.86□□□□□ -1.79
RFC1-215ENST00000512881 KRTAP13-3Q3SY46 172 aa3.86□□□□□ -1.79
RFC1-215ENST00000512881 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
RFC1-215ENST00000512881 Q6ZRX8 168 aa3.86□□□□□ -1.79
RFC1-215ENST00000512881 SLC7A5P1Q8MH63 180 aa3.86□□□□□ -1.79
RFC1-215ENST00000512881 TRAV23DV6A0A075B6W5 121 aa3.85□□□□□ -1.79
RFC1-215ENST00000512881 A0A0J9YXY3 114 aa3.85□□□□□ -1.79
RFC1-215ENST00000512881 E9PLD3 99 aa3.85□□□□□ -1.79
RFC1-215ENST00000512881 NPC2P61916 151 aa3.85□□□□□ -1.79
RFC1-215ENST00000512881 JOSD1Q15040 202 aaPredicted RBP3.85□□□□□ -1.79
RFC1-215ENST00000512881 SOSTDC1Q6X4U4 206 aa3.85□□□□□ -1.79
RFC1-215ENST00000512881 ZNF73O43830 326 aaPredicted RBP3.84□□□□□ -1.79
RFC1-215ENST00000512881 RPS29P62273 56 aaKnown RBP3.84□□□□□ -1.79
RFC1-215ENST00000512881 Q8N377 158 aa3.84□□□□□ -1.79
RFC1-215ENST00000512881 SYS1-DBNDD2H3BUS1 97 aa3.83□□□□□ -1.8
RFC1-215ENST00000512881 SLC25A20O43772 301 aa3.83□□□□□ -1.8
RFC1-215ENST00000512881 ASB16-AS1Q495Z4 193 aa3.83□□□□□ -1.8
RFC1-215ENST00000512881 ST20-AS1Q8NBB2 130 aa3.83□□□□□ -1.8
RFC1-215ENST00000512881 C5orf52A6NGY3 159 aa3.82□□□□□ -1.8
RFC1-215ENST00000512881 HINT1P49773 126 aaPredicted RBP3.82□□□□□ -1.8
RFC1-215ENST00000512881 C9orf153Q5TBE3 101 aa3.82□□□□□ -1.8
RFC1-215ENST00000512881 OR13C6PQ8NH95 151 aa3.82□□□□□ -1.8
RFC1-215ENST00000512881 LINC00308Q8TCZ7 52 aa3.82□□□□□ -1.8
RFC1-215ENST00000512881 CBY1Q9Y3M2 126 aa3.82□□□□□ -1.8
RFC1-215ENST00000512881 HIST1H2BKO60814 126 aa3.81□□□□□ -1.8
RFC1-215ENST00000512881 TIMM17BO60830 172 aa3.81□□□□□ -1.8
RFC1-215ENST00000512881 HIST1H2BJP06899 126 aa3.81□□□□□ -1.8
RFC1-215ENST00000512881 HIST1H2BOP23527 126 aa3.81□□□□□ -1.8
RFC1-215ENST00000512881 HIST1H2BBP33778 126 aa3.81□□□□□ -1.8
RFC1-215ENST00000512881 HIST1H2BDP58876 126 aa3.81□□□□□ -1.8
RFC1-215ENST00000512881 HIST1H2BCP62807 126 aa3.81□□□□□ -1.8
RFC1-215ENST00000512881 HIST2H2BEQ16778 126 aa3.81□□□□□ -1.8
RFC1-215ENST00000512881 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.81□□□□□ -1.8
RFC1-215ENST00000512881 LINC01545Q5VT33 79 aa3.81□□□□□ -1.8
RFC1-215ENST00000512881 PET117Q6UWS5 81 aa3.81□□□□□ -1.8
RFC1-215ENST00000512881 HIST1H2BHQ93079 126 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms