RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	CCL19	Q99731	98 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620	SPTBN5	Q9NRC6	3674 aa	Known RBP	2.19	□□□□□ -2.06
CAST-238	ENST00000512620	COL6A6	A6NMZ7	2263 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620	DCHS2	Q6V1P9	2916 aa		2.18	□□□□□ -2.06
CAST-238	ENST00000512620	NCOR1	O75376	2440 aa		2.18	□□□□□ -2.06
CAST-238	ENST00000512620	HRNR	Q86YZ3	2850 aa	Predicted RBP	2.18	□□□□□ -2.06
CAST-238	ENST00000512620	IGKV4-1	P06312	121 aa		2.18	□□□□□ -2.06
CAST-238	ENST00000512620	COX7B	P24311	80 aa		2.18	□□□□□ -2.06
CAST-238	ENST00000512620		Q6ZQY7	126 aa		2.18	□□□□□ -2.06
CAST-238	ENST00000512620	DIRC1	Q969H9	104 aa		2.18	□□□□□ -2.06
CAST-238	ENST00000512620	TACC2	O95359	2948 aa		2.18	□□□□□ -2.06
CAST-238	ENST00000512620	WDFY4	Q6ZS81	3184 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	OTOGL	Q3ZCN5	2332 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	ANKHD1	Q8IWZ3	2542 aa	Known RBP	2.17	□□□□□ -2.06
CAST-238	ENST00000512620	LCE6A	A0A183	80 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	KRTAP12-2	P59991	146 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	C9orf116	Q5BN46	136 aa	Predicted RBP	2.17	□□□□□ -2.06
CAST-238	ENST00000512620	CLPSL2	Q6UWE3	100 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	LCA10	Q71F78	164 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	LINC00269	Q8N2A0	174 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	HIGD2A	Q9BW72	106 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	CYP4F30P	Q9H0H9	118 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	KLK12	Q9UKR0	248 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	DCHS1	Q96JQ0	3298 aa		2.17	□□□□□ -2.06
CAST-238	ENST00000512620	PTPRZ1	P23471	2315 aa	Predicted RBP	2.17	□□□□□ -2.06
CAST-238	ENST00000512620	LRBA	P50851	2863 aa		2.16	□□□□□ -2.06
CAST-238	ENST00000512620	ACACA	Q13085	2346 aa		2.16	□□□□□ -2.06
CAST-238	ENST00000512620	GVQW2	A0A096LPI5	108 aa	Predicted RBP	2.16	□□□□□ -2.06
CAST-238	ENST00000512620	TRAV22	A0A0B4J277	110 aa		2.16	□□□□□ -2.06
CAST-238	ENST00000512620	C8orf87	E5RJ46	101 aa		2.16	□□□□□ -2.06
CAST-238	ENST00000512620	ZNF73	O43830	326 aa	Predicted RBP	2.16	□□□□□ -2.06
CAST-238	ENST00000512620	ELOF1	P60002	83 aa	Known RBP	2.16	□□□□□ -2.06
CAST-238	ENST00000512620	SPAG11B	Q08648	103 aa		2.16	□□□□□ -2.06
CAST-238	ENST00000512620	LUZP6	Q538Z0	58 aa		2.16	□□□□□ -2.06
CAST-238	ENST00000512620	UNQ6190/PRO20217	Q6UXQ8	127 aa		2.16	□□□□□ -2.06
CAST-238	ENST00000512620	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	2.16	□□□□□ -2.06	5e-7	■■■■■ 33.7
CAST-238	ENST00000512620	MGA	Q8IWI9	3026 aa		2.15	□□□□□ -2.06
CAST-238	ENST00000512620	CACNA1H	O95180	2353 aa		2.15	□□□□□ -2.06
CAST-238	ENST00000512620	IGLV10-54	A0A075B6I4	117 aa		2.15	□□□□□ -2.07
CAST-238	ENST00000512620		A6NN06	94 aa		2.15	□□□□□ -2.07
CAST-238	ENST00000512620	ANG	P03950	147 aa	Known RBP	2.15	□□□□□ -2.07
CAST-238	ENST00000512620	DEFB130B	P0DP73	79 aa		2.15	□□□□□ -2.07
CAST-238	ENST00000512620	DEFB130A	P0DP74	79 aa		2.15	□□□□□ -2.07
CAST-238	ENST00000512620	C7orf65	Q6ZTY9	151 aa		2.15	□□□□□ -2.07
CAST-238	ENST00000512620	C1orf64	Q8NEQ6	169 aa		2.15	□□□□□ -2.07
CAST-238	ENST00000512620	ZCCHC13	Q8WW36	166 aa	Known RBP	2.15	□□□□□ -2.07
CAST-238	ENST00000512620	LIMD2	Q9BT23	127 aa		2.15	□□□□□ -2.07
CAST-238	ENST00000512620	MAP1B	P46821	2468 aa	Known RBP	2.15	□□□□□ -2.07
CAST-238	ENST00000512620	IGKV2D-24	A0A075B6R9	120 aa		2.14	□□□□□ -2.07
CAST-238	ENST00000512620		A0A1B0GW54	56 aa		2.14	□□□□□ -2.07
CAST-238	ENST00000512620	PSCA	O43653	123 aa		2.14	□□□□□ -2.07
CAST-238	ENST00000512620	LINC00483	Q53H64	154 aa		2.14	□□□□□ -2.07
CAST-238	ENST00000512620	SPANXA2-OT1	Q8N9U9	137 aa		2.14	□□□□□ -2.07
CAST-238	ENST00000512620	PRO0255	Q9UI72	69 aa		2.14	□□□□□ -2.07
CAST-238	ENST00000512620	LOC400499	M0QZD8	3231 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	AKAP13	Q12802	2813 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620		A0A096LPF7	62 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	ETDC	A0A1B0GVM5	59 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	LRCOL1	A6NCL2	159 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	C16orf90	A8MZG2	172 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	IGLV1-51	P01701	117 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	ASB16-AS1	Q495Z4	193 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620		Q5VV11	94 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	WFDC10A	Q9H1F0	79 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	XAGE1A	Q9HD64	81 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	C6orf48	Q9UBA6	75 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	MYO15A	Q9UKN7	3530 aa		2.13	□□□□□ -2.07
CAST-238	ENST00000512620	SPTA1	P02549	2419 aa		2.12	□□□□□ -2.07
CAST-238	ENST00000512620	IGLV5-48	A0A075B6I7	105 aa		2.12	□□□□□ -2.07
CAST-238	ENST00000512620	LOC101927531	A0A1B0GV80	90 aa		2.12	□□□□□ -2.07
CAST-238	ENST00000512620		A8MUN3	132 aa		2.12	□□□□□ -2.07
CAST-238	ENST00000512620	HCG22	E2RYF7	251 aa		2.12	□□□□□ -2.07
CAST-238	ENST00000512620	C3orf84	H3BNL1	204 aa		2.12	□□□□□ -2.07
CAST-238	ENST00000512620	NDUFB1	O75438	58 aa		2.12	□□□□□ -2.07
CAST-238	ENST00000512620	PRB1	P04280	392 aa		2.12	□□□□□ -2.07
CAST-238	ENST00000512620	KPRP	Q5T749	579 aa	Predicted RBP	2.12	□□□□□ -2.07
CAST-238	ENST00000512620	ZNF706	Q9Y5V0	76 aa	Predicted RBP	2.12	□□□□□ -2.07
CAST-238	ENST00000512620	SPTAN1	Q13813	2472 aa	Known RBP	2.12	□□□□□ -2.07
CAST-238	ENST00000512620	ANKRD11	Q6UB99	2663 aa	Predicted RBP	2.12	□□□□□ -2.07
CAST-238	ENST00000512620		A0A1W2PNM2	257 aa		2.11	□□□□□ -2.07
CAST-238	ENST00000512620	LELP1	Q5T871	98 aa		2.11	□□□□□ -2.07
CAST-238	ENST00000512620	DEFB105A	Q8NG35	78 aa		2.11	□□□□□ -2.07
CAST-238	ENST00000512620	CDC42SE1	Q9NRR8	79 aa		2.11	□□□□□ -2.07
CAST-238	ENST00000512620	HIVEP3	Q5T1R4	2406 aa		2.11	□□□□□ -2.07
CAST-238	ENST00000512620	DMXL1	Q9Y485	3027 aa		2.11	□□□□□ -2.07
CAST-238	ENST00000512620	CSMD1	Q96PZ7	3565 aa		2.1	□□□□□ -2.07
CAST-238	ENST00000512620	CHKB-CPT1B	H3BT56	60 aa		2.1	□□□□□ -2.07
CAST-238	ENST00000512620	ST20-AS1	Q8NBB2	130 aa		2.1	□□□□□ -2.07
CAST-238	ENST00000512620	SPRR4	Q96PI1	79 aa		2.1	□□□□□ -2.07
CAST-238	ENST00000512620	B9D2	Q9BPU9	175 aa		2.1	□□□□□ -2.07
CAST-238	ENST00000512620		Q9BRP9	147 aa		2.1	□□□□□ -2.07
CAST-238	ENST00000512620	KCNQ1DN	Q9H478	68 aa		2.1	□□□□□ -2.07
CAST-238	ENST00000512620	ADGRG4	Q8IZF6	3080 aa		2.1	□□□□□ -2.07
CAST-238	ENST00000512620	AKAP6	Q13023	2319 aa		2.09	□□□□□ -2.07
CAST-238	ENST00000512620	BOD1L1	Q8NFC6	3051 aa		2.09	□□□□□ -2.07
CAST-238	ENST00000512620		H3BPC8	53 aa		2.09	□□□□□ -2.07
CAST-238	ENST00000512620		K7EQZ3	153 aa		2.09	□□□□□ -2.07
CAST-238	ENST00000512620		K7ERS5	55 aa		2.09	□□□□□ -2.07
CAST-238	ENST00000512620	MP68	P56378	58 aa		2.09	□□□□□ -2.07
CAST-238	ENST00000512620	C1orf137	Q5JT78	98 aa		2.09	□□□□□ -2.07

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms