RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	SMIM26	A0A096LP01	95 aa		4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340	SMIM1	B2RUZ4	78 aa		4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340	IGKC	P01834	107 aa		4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340	SMR3B	P02814	79 aa	Predicted RBP	4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340	TLX1NB	P0CAT3	122 aa		4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340	FXYD2	P54710	66 aa		4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340	HERVK_113	P61574	105 aa		4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340		Q5VSD8	79 aa		4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340	PLAC8	Q9NZF1	115 aa		4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340	SERP1	Q9Y6X1	66 aa		4.78	□□□□□ -1.64
NR1I3-231	ENST00000512340		A0A096LNI7	61 aa		4.77	□□□□□ -1.65
NR1I3-231	ENST00000512340		A0A0U1RQV1	116 aa		4.77	□□□□□ -1.65
NR1I3-231	ENST00000512340	ACYP1	P07311	99 aa		4.77	□□□□□ -1.65
NR1I3-231	ENST00000512340	KIAA0087	Q14695	138 aa		4.77	□□□□□ -1.65
NR1I3-231	ENST00000512340	MRPL55	Q7Z7F7	128 aa	Known RBP	4.77	□□□□□ -1.65
NR1I3-231	ENST00000512340	NHP2	Q9NX24	153 aa	Known RBP	4.77	□□□□□ -1.65
NR1I3-231	ENST00000512340	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.77	□□□□□ -1.65
NR1I3-231	ENST00000512340	LRP1B	Q9NZR2	4599 aa		4.76	□□□□□ -1.65
NR1I3-231	ENST00000512340	C11orf86	A6NJI1	115 aa		4.76	□□□□□ -1.65
NR1I3-231	ENST00000512340	CHTF8	P0CG12	524 aa		4.76	□□□□□ -1.65
NR1I3-231	ENST00000512340	ZNF22	P17026	224 aa	Predicted RBP	4.76	□□□□□ -1.65
NR1I3-231	ENST00000512340	RPL37A	P61513	92 aa	Known RBP	4.76	□□□□□ -1.65
NR1I3-231	ENST00000512340	HAMP	P81172	84 aa		4.76	□□□□□ -1.65
NR1I3-231	ENST00000512340	C2orf82	Q6UX34	121 aa		4.76	□□□□□ -1.65
NR1I3-231	ENST00000512340	C6orf48	Q9UBA6	75 aa		4.76	□□□□□ -1.65
NR1I3-231	ENST00000512340	INAFM2	P0DMQ5	153 aa		4.75	□□□□□ -1.65
NR1I3-231	ENST00000512340	NPC2	P61916	151 aa		4.75	□□□□□ -1.65
NR1I3-231	ENST00000512340	COX17	Q14061	63 aa		4.75	□□□□□ -1.65
NR1I3-231	ENST00000512340	APOB	P04114	4563 aa	Known RBP	4.75	□□□□□ -1.65
NR1I3-231	ENST00000512340	DNAH5	Q8TE73	4624 aa		4.74	□□□□□ -1.65
NR1I3-231	ENST00000512340	IGLV5-39	A0A0G2JS06	123 aa		4.74	□□□□□ -1.65
NR1I3-231	ENST00000512340	MYMX	A0A1B0GTQ4	84 aa		4.74	□□□□□ -1.65
NR1I3-231	ENST00000512340	C9orf116	Q5BN46	136 aa	Predicted RBP	4.74	□□□□□ -1.65
NR1I3-231	ENST00000512340	C10orf25	Q5T742	122 aa		4.74	□□□□□ -1.65
NR1I3-231	ENST00000512340	PRR15	Q8IV56	129 aa		4.74	□□□□□ -1.65
NR1I3-231	ENST00000512340	TMEM223	A0PJW6	202 aa		4.73	□□□□□ -1.65
NR1I3-231	ENST00000512340		H3BT86	120 aa		4.73	□□□□□ -1.65
NR1I3-231	ENST00000512340		K7ERJ3	54 aa		4.73	□□□□□ -1.65
NR1I3-231	ENST00000512340	TCL1B	O95988	128 aa		4.73	□□□□□ -1.65
NR1I3-231	ENST00000512340	LGALS3	P17931	250 aa	Known RBP	4.73	□□□□□ -1.65
NR1I3-231	ENST00000512340	UBE2B	P63146	152 aa		4.73	□□□□□ -1.65
NR1I3-231	ENST00000512340		Q6ZRP5	223 aa		4.73	□□□□□ -1.65
NR1I3-231	ENST00000512340	SRRM2	Q9UQ35	2752 aa	Known RBP	4.73	□□□□□ -1.65
NR1I3-231	ENST00000512340	PSMB2	P49721	201 aa		4.72	□□□□□ -1.65
NR1I3-231	ENST00000512340	LINC00158	P58513	81 aa		4.72	□□□□□ -1.65
NR1I3-231	ENST00000512340	HIST1H4A	P62805	103 aa	Known RBP	4.72	□□□□□ -1.65
NR1I3-231	ENST00000512340	LINC00643	Q86TS7	51 aa		4.72	□□□□□ -1.65
NR1I3-231	ENST00000512340	NKAPP1	Q8N9T2	125 aa		4.72	□□□□□ -1.65
NR1I3-231	ENST00000512340	TRBV7-6	A0A0J9YX20	115 aa		4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	hADV29S1	A0JD25	119 aa		4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	PANO1	I0J062	215 aa		4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	LEPROT	O15243	131 aa		4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	SLC25A20	O43772	301 aa		4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	SERTAD4-AS1	Q5TG53	156 aa		4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	SERP2	Q8N6R1	65 aa		4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	BRK1	Q8WUW1	75 aa		4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	DSCR8	Q96T75	97 aa		4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	NDUFA12	Q9UI09	145 aa		4.71	□□□□□ -1.66
NR1I3-231	ENST00000512340	XAGE1A	Q9HD64	81 aa		4.7	□□□□□ -1.66
NR1I3-231	ENST00000512340		A0A1W2PNN7	141 aa		4.69	□□□□□ -1.66
NR1I3-231	ENST00000512340		H3BS24	57 aa		4.69	□□□□□ -1.66
NR1I3-231	ENST00000512340	ATP5E	P56381	51 aa	Predicted RBP	4.69	□□□□□ -1.66
NR1I3-231	ENST00000512340	PCP2	Q8IVA1	136 aa		4.69	□□□□□ -1.66
NR1I3-231	ENST00000512340	ZNF625	Q96I27	306 aa	Predicted RBP	4.69	□□□□□ -1.66
NR1I3-231	ENST00000512340	PLA2G2D	Q9UNK4	145 aa		4.69	□□□□□ -1.66
NR1I3-231	ENST00000512340	PRR3	P79522	188 aa	Known RBP	4.68	□□□□□ -1.66
NR1I3-231	ENST00000512340	MYCBP2	O75592	4640 aa		4.68	□□□□□ -1.66
NR1I3-231	ENST00000512340	FLG2	Q5D862	2391 aa	Predicted RBP	4.68	□□□□□ -1.66
NR1I3-231	ENST00000512340	C9orf129	Q5T035	196 aa	Known RBP	4.67	□□□□□ -1.66
NR1I3-231	ENST00000512340	REG3G	Q6UW15	175 aa		4.67	□□□□□ -1.66
NR1I3-231	ENST00000512340	SPINK6	Q6UWN8	80 aa		4.67	□□□□□ -1.66
NR1I3-231	ENST00000512340	PHF5A	Q7RTV0	110 aa	Known RBP	4.67	□□□□□ -1.66
NR1I3-231	ENST00000512340	SND1-IT1	Q9HBX3	110 aa		4.67	□□□□□ -1.66
NR1I3-231	ENST00000512340	C22orf24	Q9Y442	160 aa		4.67	□□□□□ -1.66
NR1I3-231	ENST00000512340	IGLV5-37	A0A075B6J1	123 aa		4.66	□□□□□ -1.66
NR1I3-231	ENST00000512340	LOC107984156	A0A0G2JMH3	177 aa		4.66	□□□□□ -1.66
NR1I3-231	ENST00000512340	TRBV10-2	A0A0K0K1G8	114 aa		4.66	□□□□□ -1.66
NR1I3-231	ENST00000512340	LOC100996750	A0A140TA64	210 aa		4.66	□□□□□ -1.66
NR1I3-231	ENST00000512340	FAM168B	A1KXE4	195 aa		4.66	□□□□□ -1.66
NR1I3-231	ENST00000512340	C1orf137	Q5JT78	98 aa		4.66	□□□□□ -1.66
NR1I3-231	ENST00000512340	ARL17A	Q8IVW1	177 aa		4.66	□□□□□ -1.66
NR1I3-231	ENST00000512340	HIST1H4G	Q99525	98 aa		4.66	□□□□□ -1.66
NR1I3-231	ENST00000512340	KRTAP4-6	Q9BYQ5	205 aa		4.66	□□□□□ -1.66
NR1I3-231	ENST00000512340	DIRC1	Q969H9	104 aa		4.65	□□□□□ -1.67
NR1I3-231	ENST00000512340	PSORS1C2	Q9UIG4	136 aa		4.65	□□□□□ -1.67
NR1I3-231	ENST00000512340	IGKV2D-26	A0A0A0MRZ7	120 aa		4.64	□□□□□ -1.67
NR1I3-231	ENST00000512340	ZNF815P	A8K554	130 aa		4.64	□□□□□ -1.67
NR1I3-231	ENST00000512340		M0R378	163 aa		4.64	□□□□□ -1.67
NR1I3-231	ENST00000512340	RPL28	P46779	137 aa	Known RBP	4.64	□□□□□ -1.67
NR1I3-231	ENST00000512340	ATXN8	Q156A1	80 aa		4.64	□□□□□ -1.67
NR1I3-231	ENST00000512340	SCGB1D4	Q6XE38	83 aa		4.64	□□□□□ -1.67
NR1I3-231	ENST00000512340	MIR7-3HG	Q8N6C7	128 aa		4.64	□□□□□ -1.67
NR1I3-231	ENST00000512340	TIMM17B	O60830	172 aa		4.63	□□□□□ -1.67
NR1I3-231	ENST00000512340	IGLV7-43	P04211	117 aa		4.63	□□□□□ -1.67
NR1I3-231	ENST00000512340	UBE2A	P49459	152 aa		4.63	□□□□□ -1.67
NR1I3-231	ENST00000512340	FP248	Q71RG6	208 aa	Predicted RBP	4.63	□□□□□ -1.67
NR1I3-231	ENST00000512340	LINC00167	Q96N53	147 aa		4.63	□□□□□ -1.67
NR1I3-231	ENST00000512340	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.62	□□□□□ -1.67

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