RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 SMCR5Q8TEV8 140 aa8.77□□□□□ -1.01
PCDHA4-202ENST00000512229 APCP25054 2843 aa8.77□□□□□ -1.01
PCDHA4-202ENST00000512229 TRBV7-6A0A0J9YX20 115 aa8.77□□□□□ -1.01
PCDHA4-202ENST00000512229 COX7CP15954 63 aa8.76□□□□□ -1.01
PCDHA4-202ENST00000512229 ELOF1P60002 83 aaKnown RBP8.76□□□□□ -1.01
PCDHA4-202ENST00000512229 FBN2P35556 2912 aa8.75□□□□□ -1.01
PCDHA4-202ENST00000512229 VPREB1P12018 145 aa8.75□□□□□ -1.01
PCDHA4-202ENST00000512229 WIPF1O43516 503 aa8.75□□□□□ -1.01
PCDHA4-202ENST00000512229 IGKV4-1P06312 121 aa8.75□□□□□ -1.01
PCDHA4-202ENST00000512229 Q6ZVQ6 151 aa8.75□□□□□ -1.01
PCDHA4-202ENST00000512229 A0A087WSZ3 146 aa8.74□□□□□ -1.01
PCDHA4-202ENST00000512229 NSD1Q96L73 2696 aaPredicted RBP8.74□□□□□ -1.01
PCDHA4-202ENST00000512229 HRNRQ86YZ3 2850 aaPredicted RBP8.73□□□□□ -1.01
PCDHA4-202ENST00000512229 J3KT08 172 aa8.73□□□□□ -1.01
PCDHA4-202ENST00000512229 C16orf90A8MZG2 172 aa8.72□□□□□ -1.01
PCDHA4-202ENST00000512229 IGLV6-57P01721 117 aa8.72□□□□□ -1.01
PCDHA4-202ENST00000512229 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
PCDHA4-202ENST00000512229 HIVEP1P15822 2718 aa8.72□□□□□ -1.01
PCDHA4-202ENST00000512229 Q6ZRX8 168 aa8.71□□□□□ -1.02
PCDHA4-202ENST00000512229 C15orf56Q8N910 161 aa8.71□□□□□ -1.02
PCDHA4-202ENST00000512229 CUBNO60494 3623 aa8.71□□□□□ -1.02
PCDHA4-202ENST00000512229 NIPBLQ6KC79 2804 aaeCLIP8.7□□□□□ -1.02
PCDHA4-202ENST00000512229 CIRBP-AS1Q8TBR5 109 aa8.69□□□□□ -1.02
PCDHA4-202ENST00000512229 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
PCDHA4-202ENST00000512229 FAM104AQ969W3 186 aa8.69□□□□□ -1.02
PCDHA4-202ENST00000512229 SNURFQ9Y675 71 aa8.69□□□□□ -1.02
PCDHA4-202ENST00000512229 SVEP1Q4LDE5 3571 aa8.69□□□□□ -1.02
PCDHA4-202ENST00000512229 PHF5AQ7RTV0 110 aaKnown RBP8.69□□□□□ -1.02
PCDHA4-202ENST00000512229 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
PCDHA4-202ENST00000512229 TRBV7-7A0A0K0K1E9 115 aa8.68□□□□□ -1.02
PCDHA4-202ENST00000512229 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
PCDHA4-202ENST00000512229 FAM236DA0A1B0GTK5 79 aa8.67□□□□□ -1.02
PCDHA4-202ENST00000512229 FAM236CP0DP71 79 aa8.67□□□□□ -1.02
PCDHA4-202ENST00000512229 CELSR1Q9NYQ6 3014 aa8.67□□□□□ -1.02
PCDHA4-202ENST00000512229 NDUFC1O43677 76 aa8.66□□□□□ -1.02
PCDHA4-202ENST00000512229 WWC2-AS2Q96NR7 200 aa8.66□□□□□ -1.02
PCDHA4-202ENST00000512229 SERTAD4-AS1Q5TG53 156 aa8.66□□□□□ -1.02
PCDHA4-202ENST00000512229 FAM168BA1KXE4 195 aa8.65□□□□□ -1.02
PCDHA4-202ENST00000512229 CHKB-CPT1BH3BT56 60 aa8.65□□□□□ -1.02
PCDHA4-202ENST00000512229 CSMD1Q96PZ7 3565 aa8.65□□□□□ -1.02
PCDHA4-202ENST00000512229 DEFB116Q30KQ4 102 aa8.65□□□□□ -1.02
PCDHA4-202ENST00000512229 RTL8CO15255 209 aa8.65□□□□□ -1.03
PCDHA4-202ENST00000512229 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.03
PCDHA4-202ENST00000512229 Q6ZQT0 140 aa8.64□□□□□ -1.03
PCDHA4-202ENST00000512229 KCNQ1DNQ9H478 68 aa8.64□□□□□ -1.03
PCDHA4-202ENST00000512229 CXCL6P80162 114 aa8.63□□□□□ -1.03
PCDHA4-202ENST00000512229 ST20-AS1Q8NBB2 130 aa8.63□□□□□ -1.03
PCDHA4-202ENST00000512229 LOC110117498A0A087WWA1 95 aa8.62□□□□□ -1.03
PCDHA4-202ENST00000512229 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
PCDHA4-202ENST00000512229 LINC00528Q8N1L1 170 aa8.62□□□□□ -1.03
PCDHA4-202ENST00000512229 Q8N9L7 120 aa8.61□□□□□ -1.03
PCDHA4-202ENST00000512229 IGLV1-50A0A075B6I6 118 aa8.61□□□□□ -1.03
PCDHA4-202ENST00000512229 Q8NBF4 154 aa8.6□□□□□ -1.03
PCDHA4-202ENST00000512229 A0A1B0GW54 56 aa8.6□□□□□ -1.03
PCDHA4-202ENST00000512229 C9orf129Q5T035 196 aaKnown RBP8.6□□□□□ -1.03
PCDHA4-202ENST00000512229 SPENQ96T58 3664 aaKnown RBP8.59□□□□□ -1.03
PCDHA4-202ENST00000512229 TLX1NBP0CAT3 122 aa8.59□□□□□ -1.03
PCDHA4-202ENST00000512229 CASC2Q6XLA1 102 aa8.59□□□□□ -1.03
PCDHA4-202ENST00000512229 CASC10Q5T4H9 136 aa8.58□□□□□ -1.04
PCDHA4-202ENST00000512229 LINC00476Q8WZB0 136 aa8.58□□□□□ -1.04
PCDHA4-202ENST00000512229 APLNQ9ULZ1 77 aa8.58□□□□□ -1.04
PCDHA4-202ENST00000512229 IGHV6-1A0A0B4J1U7 121 aa8.58□□□□□ -1.04
PCDHA4-202ENST00000512229 C9orf163Q8N9P6 203 aa8.58□□□□□ -1.04
PCDHA4-202ENST00000512229 LINC00208Q96KT6 92 aa8.57□□□□□ -1.04
PCDHA4-202ENST00000512229 BCE1O60756 84 aa8.57□□□□□ -1.04
PCDHA4-202ENST00000512229 PRR4Q16378 134 aa8.57□□□□□ -1.04
PCDHA4-202ENST00000512229 C5orf47Q569G3 176 aa8.56□□□□□ -1.04
PCDHA4-202ENST00000512229 MOBPQ13875 183 aa8.56□□□□□ -1.04
PCDHA4-202ENST00000512229 MXRA5Q9NR99 2828 aa8.56□□□□□ -1.04
PCDHA4-202ENST00000512229 ATP5EP56381 51 aaPredicted RBP8.55□□□□□ -1.04
PCDHA4-202ENST00000512229 HCG22E2RYF7 251 aa8.54□□□□□ -1.04
PCDHA4-202ENST00000512229 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
PCDHA4-202ENST00000512229 A0A087WTM6 91 aa8.53□□□□□ -1.04
PCDHA4-202ENST00000512229 TMEM254Q8TBM7 123 aa8.52□□□□□ -1.05
PCDHA4-202ENST00000512229 CNBPP62633 177 aaKnown RBP8.5□□□□□ -1.05
PCDHA4-202ENST00000512229 MPLKIPQ8TAP9 179 aa8.49□□□□□ -1.05
PCDHA4-202ENST00000512229 TRBV7-4A0A0J9YYF1 115 aa8.49□□□□□ -1.05
PCDHA4-202ENST00000512229 Q8N377 158 aa8.49□□□□□ -1.05
PCDHA4-202ENST00000512229 A0A1W2PNN7 141 aa8.47□□□□□ -1.05
PCDHA4-202ENST00000512229 SMIM29Q86T20 159 aa8.47□□□□□ -1.05
PCDHA4-202ENST00000512229 LIMD2Q9BT23 127 aa8.47□□□□□ -1.05
PCDHA4-202ENST00000512229 KMT2BQ9UMN6 2715 aaPredicted RBP8.46□□□□□ -1.05
PCDHA4-202ENST00000512229 CRYGAP11844 174 aa8.45□□□□□ -1.06
PCDHA4-202ENST00000512229 STAB2Q8WWQ8 2551 aa8.45□□□□□ -1.06
PCDHA4-202ENST00000512229 H0Y9P7 68 aa8.45□□□□□ -1.06
PCDHA4-202ENST00000512229 SPACA4Q8TDM5 124 aa8.42□□□□□ -1.06
PCDHA4-202ENST00000512229 CSMD2Q7Z408 3487 aa8.41□□□□□ -1.06
PCDHA4-202ENST00000512229 ERC2-IT1O76042 136 aa8.41□□□□□ -1.06
PCDHA4-202ENST00000512229 SEC61GP60059 68 aa8.41□□□□□ -1.06
PCDHA4-202ENST00000512229 ZNF861PO60384 105 aa8.41□□□□□ -1.06
PCDHA4-202ENST00000512229 IGFL1Q6UW32 110 aa8.41□□□□□ -1.06
PCDHA4-202ENST00000512229 IGLV5-37A0A075B6J1 123 aa8.4□□□□□ -1.06
PCDHA4-202ENST00000512229 hDV103S1A0JD37 113 aa8.4□□□□□ -1.06
PCDHA4-202ENST00000512229 PCOTHQ58A44 107 aa8.4□□□□□ -1.06
PCDHA4-202ENST00000512229 LINC01600Q96MT4 127 aa8.4□□□□□ -1.07
PCDHA4-202ENST00000512229 TENM4Q6N022 2769 aa8.39□□□□□ -1.07
PCDHA4-202ENST00000512229 SMIM26A0A096LP01 95 aa8.39□□□□□ -1.07
PCDHA4-202ENST00000512229 SERP1Q9Y6X1 66 aa8.39□□□□□ -1.07
PCDHA4-202ENST00000512229 RPL37AP61513 92 aaKnown RBP8.38□□□□□ -1.07
PCDHA4-202ENST00000512229 V9GYY9 64 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms