RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 C9orf153Q5TBE3 101 aa4□□□□□ -1.77
HMGCR-211ENST00000512053 BAGE3Q86Y29 109 aa4□□□□□ -1.77
HMGCR-211ENST00000512053 TRAPPC1Q9Y5R8 145 aa4□□□□□ -1.77
HMGCR-211ENST00000512053 M0R2T5 61 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST1H2BKO60814 126 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST1H2BJP06899 126 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST1H2BOP23527 126 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST1H2BBP33778 126 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 SPRR1AP35321 89 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST1H2BDP58876 126 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST1H2BCP62807 126 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST2H2BEQ16778 126 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST1H2BHQ93079 126 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST1H2BNQ99877 126 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 HIST1H2BMQ99879 126 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 MAP1LC3CQ9BXW4 147 aa3.99□□□□□ -1.77
HMGCR-211ENST00000512053 IGLV8-61A0A075B6I0 122 aa3.98□□□□□ -1.77
HMGCR-211ENST00000512053 TRBV10-3A0A0K0K1G6 114 aa3.98□□□□□ -1.77
HMGCR-211ENST00000512053 C11orf86A6NJI1 115 aa3.98□□□□□ -1.77
HMGCR-211ENST00000512053 HBDP02042 147 aa3.98□□□□□ -1.77
HMGCR-211ENST00000512053 LINC00614P0C842 121 aa3.98□□□□□ -1.77
HMGCR-211ENST00000512053 SMIM13P0DJ93 91 aa3.98□□□□□ -1.77
HMGCR-211ENST00000512053 HERV-K104P63124 156 aa3.98□□□□□ -1.77
HMGCR-211ENST00000512053 JOSD1Q15040 202 aaPredicted RBP3.98□□□□□ -1.77
HMGCR-211ENST00000512053 PCOTHQ58A44 107 aa3.98□□□□□ -1.77
HMGCR-211ENST00000512053 B5MCH6 92 aa3.97□□□□□ -1.77
HMGCR-211ENST00000512053 MT1HP80294 61 aa3.97□□□□□ -1.77
HMGCR-211ENST00000512053 MIR7-3HGQ8N6C7 128 aa3.97□□□□□ -1.77
HMGCR-211ENST00000512053 LIMD2Q9BT23 127 aa3.97□□□□□ -1.77
HMGCR-211ENST00000512053 CHTOPQ9Y3Y2 248 aaKnown RBP3.97□□□□□ -1.77
HMGCR-211ENST00000512053 TMEM223A0PJW6 202 aa3.96□□□□□ -1.78
HMGCR-211ENST00000512053 C5orf52A6NGY3 159 aa3.96□□□□□ -1.78
HMGCR-211ENST00000512053 KRTAP4-16G5E9R7 235 aaPredicted RBP3.96□□□□□ -1.78
HMGCR-211ENST00000512053 DDTP30046 118 aa3.96□□□□□ -1.78
HMGCR-211ENST00000512053 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.78
HMGCR-211ENST00000512053 COA6Q5JTJ3 125 aaKnown RBP3.96□□□□□ -1.78
HMGCR-211ENST00000512053 S100A7L2Q5SY68 101 aa3.96□□□□□ -1.78
HMGCR-211ENST00000512053 MYMXA0A1B0GTQ4 84 aa3.95□□□□□ -1.78
HMGCR-211ENST00000512053 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
HMGCR-211ENST00000512053 ERC2-IT1O76042 136 aa3.95□□□□□ -1.78
HMGCR-211ENST00000512053 HINT1P49773 126 aaPredicted RBP3.95□□□□□ -1.78
HMGCR-211ENST00000512053 SNRPEP62304 92 aaKnown RBP3.95□□□□□ -1.78
HMGCR-211ENST00000512053 PMCHL1Q16048 86 aa3.95□□□□□ -1.78
HMGCR-211ENST00000512053 SLC25A34Q6PIV7 304 aa3.95□□□□□ -1.78
HMGCR-211ENST00000512053 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
HMGCR-211ENST00000512053 Q6ZRX8 168 aa3.95□□□□□ -1.78
HMGCR-211ENST00000512053 MIEN1Q9BRT3 115 aa3.95□□□□□ -1.78
HMGCR-211ENST00000512053 TRBV10-2A0A0K0K1G8 114 aa3.94□□□□□ -1.78
HMGCR-211ENST00000512053 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
HMGCR-211ENST00000512053 HIST3H2BBQ8N257 126 aa3.94□□□□□ -1.78
HMGCR-211ENST00000512053 C18orf32Q8TCD1 76 aa3.94□□□□□ -1.78
HMGCR-211ENST00000512053 FSIP2Q5CZC0 6907 aa3.93□□□□□ -1.78
HMGCR-211ENST00000512053 A0A096LNJ9 63 aa3.93□□□□□ -1.78
HMGCR-211ENST00000512053 IGLV6-57P01721 117 aa3.93□□□□□ -1.78
HMGCR-211ENST00000512053 S100A2P29034 98 aa3.93□□□□□ -1.78
HMGCR-211ENST00000512053 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
HMGCR-211ENST00000512053 HRCT1Q6UXD1 115 aa3.93□□□□□ -1.78
HMGCR-211ENST00000512053 Q9BRP9 147 aa3.93□□□□□ -1.78
HMGCR-211ENST00000512053 CBY1Q9Y3M2 126 aa3.93□□□□□ -1.78
HMGCR-211ENST00000512053 TRAV12-1A0A0B4J245 112 aa3.92□□□□□ -1.78
HMGCR-211ENST00000512053 SERF1AO75920 110 aa3.92□□□□□ -1.78
HMGCR-211ENST00000512053 AKR1D1P51857 326 aa3.92□□□□□ -1.78
HMGCR-211ENST00000512053 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
HMGCR-211ENST00000512053 SPANXB1Q9NS25 103 aaPredicted RBP3.92□□□□□ -1.78
HMGCR-211ENST00000512053 LAMTOR3Q9UHA4 124 aa3.92□□□□□ -1.78
HMGCR-211ENST00000512053 TRAV23DV6A0A075B6W5 121 aa3.91□□□□□ -1.78
HMGCR-211ENST00000512053 ZNF73O43830 326 aaPredicted RBP3.91□□□□□ -1.78
HMGCR-211ENST00000512053 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
HMGCR-211ENST00000512053 LINC00518Q8N0U6 118 aa3.91□□□□□ -1.78
HMGCR-211ENST00000512053 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
HMGCR-211ENST00000512053 CHCHD1Q96BP2 118 aaKnown RBP3.91□□□□□ -1.78
HMGCR-211ENST00000512053 URB1-AS1Q96HZ7 61 aa3.91□□□□□ -1.78
HMGCR-211ENST00000512053 HIST1H2BLQ99880 126 aa3.91□□□□□ -1.78
HMGCR-211ENST00000512053 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
HMGCR-211ENST00000512053 LOC107984156A0A0G2JMH3 177 aa3.9□□□□□ -1.79
HMGCR-211ENST00000512053 HSBP1O75506 76 aa3.9□□□□□ -1.79
HMGCR-211ENST00000512053 NDUFC2O95298 119 aa3.9□□□□□ -1.79
HMGCR-211ENST00000512053 FABP4P15090 132 aa3.9□□□□□ -1.79
HMGCR-211ENST00000512053 ARL17AQ8IVW1 177 aa3.9□□□□□ -1.79
HMGCR-211ENST00000512053 ST20-AS1Q8NBB2 130 aa3.9□□□□□ -1.79
HMGCR-211ENST00000512053 H0Y8G0 127 aa3.89□□□□□ -1.79
HMGCR-211ENST00000512053 LEPROTO15243 131 aa3.89□□□□□ -1.79
HMGCR-211ENST00000512053 SMIM6P0DI80 62 aa3.89□□□□□ -1.79
HMGCR-211ENST00000512053 H7C2G1 150 aa3.88□□□□□ -1.79
HMGCR-211ENST00000512053 LGALS3P17931 250 aaKnown RBP3.88□□□□□ -1.79
HMGCR-211ENST00000512053 NMUP48645 174 aa3.88□□□□□ -1.79
HMGCR-211ENST00000512053 HERVK_113P61574 105 aa3.88□□□□□ -1.79
HMGCR-211ENST00000512053 TAL2Q16559 108 aa3.88□□□□□ -1.79
HMGCR-211ENST00000512053 PRO1933Q9H354 126 aa3.88□□□□□ -1.79
HMGCR-211ENST00000512053 DHRS4-AS1Q9P1J3 65 aa3.88□□□□□ -1.79
HMGCR-211ENST00000512053 CD164Q04900 197 aa3.87□□□□□ -1.79
HMGCR-211ENST00000512053 OR13C6PQ8NH95 151 aa3.87□□□□□ -1.79
HMGCR-211ENST00000512053 J3QQQ9 107 aa3.86□□□□□ -1.79
HMGCR-211ENST00000512053 LEPROTL1O95214 131 aa3.86□□□□□ -1.79
HMGCR-211ENST00000512053 SPRR1BP22528 89 aa3.86□□□□□ -1.79
HMGCR-211ENST00000512053 PLNP26678 52 aa3.86□□□□□ -1.79
HMGCR-211ENST00000512053 NPC2P61916 151 aa3.86□□□□□ -1.79
HMGCR-211ENST00000512053 RPL37P61927 97 aaKnown RBP3.86□□□□□ -1.79
HMGCR-211ENST00000512053 PYY3Q5JQD4 70 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms