RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 V9GYY9 64 aa6.22□□□□□ -1.41
POLR2J3-215ENST00000511313 MOBPQ13875 183 aa6.22□□□□□ -1.41
POLR2J3-215ENST00000511313 ELOF1P60002 83 aaKnown RBP6.22□□□□□ -1.41
POLR2J3-215ENST00000511313 NSD1Q96L73 2696 aaPredicted RBP6.22□□□□□ -1.41
POLR2J3-215ENST00000511313 CCKP06307 115 aa6.21□□□□□ -1.42
POLR2J3-215ENST00000511313 ATMQ13315 3056 aa6.21□□□□□ -1.42
POLR2J3-215ENST00000511313 LINC00575Q6W349 94 aa6.21□□□□□ -1.42
POLR2J3-215ENST00000511313 KIAA0087Q14695 138 aa6.21□□□□□ -1.42
POLR2J3-215ENST00000511313 SPTSSBQ8NFR3 76 aa6.21□□□□□ -1.42
POLR2J3-215ENST00000511313 SEC61BP60468 96 aaKnown RBP6.2□□□□□ -1.42
POLR2J3-215ENST00000511313 BOD1L1Q8NFC6 3051 aa6.19□□□□□ -1.42
POLR2J3-215ENST00000511313 NBEAQ8NFP9 2946 aa6.18□□□□□ -1.42
POLR2J3-215ENST00000511313 CENPEQ02224 2701 aa6.17□□□□□ -1.42
POLR2J3-215ENST00000511313 A0A1W2PPM0 123 aa6.17□□□□□ -1.42
POLR2J3-215ENST00000511313 RELNP78509 3460 aa6.17□□□□□ -1.42
POLR2J3-215ENST00000511313 HIST1H4AP62805 103 aaKnown RBP6.17□□□□□ -1.42
POLR2J3-215ENST00000511313 ASH1LQ9NR48 2969 aaKnown RBP6.17□□□□□ -1.42
POLR2J3-215ENST00000511313 Q8N3U1 123 aa6.17□□□□□ -1.42
POLR2J3-215ENST00000511313 IGLV6-57P01721 117 aa6.16□□□□□ -1.42
POLR2J3-215ENST00000511313 KRTAP10-1P60331 282 aa6.16□□□□□ -1.42
POLR2J3-215ENST00000511313 SPRR4Q96PI1 79 aa6.16□□□□□ -1.42
POLR2J3-215ENST00000511313 DMXL2Q8TDJ6 3036 aa6.16□□□□□ -1.42
POLR2J3-215ENST00000511313 HRCT1Q6UXD1 115 aa6.15□□□□□ -1.43
POLR2J3-215ENST00000511313 TTTY13Q9BZ97 58 aa6.15□□□□□ -1.43
POLR2J3-215ENST00000511313 A0A096LNJ9 63 aa6.14□□□□□ -1.43
POLR2J3-215ENST00000511313 COX6B2Q6YFQ2 88 aa6.14□□□□□ -1.43
POLR2J3-215ENST00000511313 ZFHX3Q15911 3703 aa6.14□□□□□ -1.43
POLR2J3-215ENST00000511313 VPS13CQ709C8 3753 aa6.14□□□□□ -1.43
POLR2J3-215ENST00000511313 K7EP34 96 aa6.14□□□□□ -1.43
POLR2J3-215ENST00000511313 IGLV7-46A0A075B6I9 117 aa6.14□□□□□ -1.43
POLR2J3-215ENST00000511313 TEX15Q9BXT5 2789 aa6.13□□□□□ -1.43
POLR2J3-215ENST00000511313 TENM4Q6N022 2769 aa6.13□□□□□ -1.43
POLR2J3-215ENST00000511313 CASC2Q6XLA1 102 aa6.13□□□□□ -1.43
POLR2J3-215ENST00000511313 FLNCQ14315 2725 aa6.12□□□□□ -1.43
POLR2J3-215ENST00000511313 IGKV4-1P06312 121 aa6.12□□□□□ -1.43
POLR2J3-215ENST00000511313 Q9UF83 564 aa6.12□□□□□ -1.43
POLR2J3-215ENST00000511313 Q6ZRN7 208 aaPredicted RBP6.12□□□□□ -1.43
POLR2J3-215ENST00000511313 K7ERJ3 54 aa6.11□□□□□ -1.43
POLR2J3-215ENST00000511313 APCP25054 2843 aa6.11□□□□□ -1.43
POLR2J3-215ENST00000511313 C9orf129Q5T035 196 aaKnown RBP6.11□□□□□ -1.43
POLR2J3-215ENST00000511313 FXYD2P54710 66 aa6.11□□□□□ -1.43
POLR2J3-215ENST00000511313 A0A1W2PNN7 141 aa6.1□□□□□ -1.43
POLR2J3-215ENST00000511313 RPS29P62273 56 aaKnown RBP6.1□□□□□ -1.43
POLR2J3-215ENST00000511313 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.1□□□□□ -1.43
POLR2J3-215ENST00000511313 KRTAP10-2P60368 255 aa6.1□□□□□ -1.43
POLR2J3-215ENST00000511313 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
POLR2J3-215ENST00000511313 ATOX1O00244 68 aa6.09□□□□□ -1.43
POLR2J3-215ENST00000511313 KRTAP1-5Q9BYS1 174 aa6.09□□□□□ -1.43
POLR2J3-215ENST00000511313 TP53AIP1Q9HCN2 124 aa6.09□□□□□ -1.43
POLR2J3-215ENST00000511313 TRIAP1O43715 76 aa6.08□□□□□ -1.44
POLR2J3-215ENST00000511313 TRBV7-4A0A0J9YYF1 115 aa6.08□□□□□ -1.44
POLR2J3-215ENST00000511313 KALRNO60229 2985 aa6.08□□□□□ -1.44
POLR2J3-215ENST00000511313 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
POLR2J3-215ENST00000511313 LINC00313P59037 77 aa6.08□□□□□ -1.44
POLR2J3-215ENST00000511313 TAX1BP3O14907 124 aa6.07□□□□□ -1.44
POLR2J3-215ENST00000511313 ST20-AS1Q8NBB2 130 aa6.07□□□□□ -1.44
POLR2J3-215ENST00000511313 ANAPC13Q9BS18 74 aa6.07□□□□□ -1.44
POLR2J3-215ENST00000511313 A0A087WSZ3 146 aa6.07□□□□□ -1.44
POLR2J3-215ENST00000511313 C2orf91Q6ZV80 131 aa6.07□□□□□ -1.44
POLR2J3-215ENST00000511313 TSPEAR-AS2P59090 65 aa6.06□□□□□ -1.44
POLR2J3-215ENST00000511313 CSMD1Q96PZ7 3565 aa6.06□□□□□ -1.44
POLR2J3-215ENST00000511313 ADAMTSL4-AS1Q5T5F5 129 aa6.04□□□□□ -1.44
POLR2J3-215ENST00000511313 KRTAP26-1Q6PEX3 210 aa6.04□□□□□ -1.44
POLR2J3-215ENST00000511313 IGHV6-1A0A0B4J1U7 121 aa6.03□□□□□ -1.44
POLR2J3-215ENST00000511313 FAM168BA1KXE4 195 aa6.03□□□□□ -1.44
POLR2J3-215ENST00000511313 WFDC2Q14508 124 aa6.03□□□□□ -1.44
POLR2J3-215ENST00000511313 LINC00643Q86TS7 51 aa6.03□□□□□ -1.44
POLR2J3-215ENST00000511313 TRBV7-7A0A0K0K1E9 115 aa6.03□□□□□ -1.44
POLR2J3-215ENST00000511313 Q6ZSA8 131 aa6.02□□□□□ -1.45
POLR2J3-215ENST00000511313 PRR26Q8N8Z3 221 aa6.01□□□□□ -1.45
POLR2J3-215ENST00000511313 SPRR1BP22528 89 aa6.01□□□□□ -1.45
POLR2J3-215ENST00000511313 CXCL6P80162 114 aa6.01□□□□□ -1.45
POLR2J3-215ENST00000511313 C14orf132Q9NPU4 83 aa6.01□□□□□ -1.45
POLR2J3-215ENST00000511313 SLPIP03973 132 aa6□□□□□ -1.45
POLR2J3-215ENST00000511313 ITPR1Q14643 2758 aa6□□□□□ -1.45
POLR2J3-215ENST00000511313 Q6ZVQ6 151 aa5.99□□□□□ -1.45
POLR2J3-215ENST00000511313 KRTAP29-1A8MX34 341 aaPredicted RBP5.98□□□□□ -1.45
POLR2J3-215ENST00000511313 CSMD2Q7Z408 3487 aa5.98□□□□□ -1.45
POLR2J3-215ENST00000511313 MAP1AP78559 2803 aaPredicted RBP5.98□□□□□ -1.45
POLR2J3-215ENST00000511313 SPRR1AP35321 89 aa5.97□□□□□ -1.45
POLR2J3-215ENST00000511313 LINC01600Q96MT4 127 aa5.97□□□□□ -1.45
POLR2J3-215ENST00000511313 LOC110117498A0A087WWA1 95 aa5.97□□□□□ -1.45
POLR2J3-215ENST00000511313 Q96NJ1 140 aa5.97□□□□□ -1.45
POLR2J3-215ENST00000511313 ETDBQ3ZM63 59 aa5.96□□□□□ -1.45
POLR2J3-215ENST00000511313 Q6Q795 121 aa5.96□□□□□ -1.45
POLR2J3-215ENST00000511313 LINC00846Q9NV44 126 aa5.96□□□□□ -1.46
POLR2J3-215ENST00000511313 NBPF19A0A087WUL8 3843 aa5.96□□□□□ -1.46
POLR2J3-215ENST00000511313 SVEP1Q4LDE5 3571 aa5.95□□□□□ -1.46
POLR2J3-215ENST00000511313 C1orf195Q5TG92 126 aa5.95□□□□□ -1.46
POLR2J3-215ENST00000511313 NOTCH1P46531 2555 aa5.94□□□□□ -1.46
POLR2J3-215ENST00000511313 FAM240AA0A1B0GVK7 77 aa5.94□□□□□ -1.46
POLR2J3-215ENST00000511313 H3BPC8 53 aa5.94□□□□□ -1.46
POLR2J3-215ENST00000511313 IGLV5-48A0A075B6I7 105 aa5.93□□□□□ -1.46
POLR2J3-215ENST00000511313 DCHS2Q6V1P9 2916 aa5.93□□□□□ -1.46
POLR2J3-215ENST00000511313 LINC01547P58512 204 aaPredicted RBP5.93□□□□□ -1.46
POLR2J3-215ENST00000511313 A0A1B0GVY2 172 aa5.92□□□□□ -1.46
POLR2J3-215ENST00000511313 SOSTDC1Q6X4U4 206 aa5.92□□□□□ -1.46
POLR2J3-215ENST00000511313 UTP20O75691 2785 aaKnown RBP5.92□□□□□ -1.46
POLR2J3-215ENST00000511313 hDV103S1A0JD37 113 aa5.92□□□□□ -1.46
POLR2J3-215ENST00000511313 C20orf197Q8N268 126 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms