RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SMIM6P0DI80 62 aa8.25□□□□□ -1.09
DDX41-212ENST00000511040 S100A12P80511 92 aa8.25□□□□□ -1.09
DDX41-212ENST00000511040 PAM16Q9Y3D7 125 aa8.25□□□□□ -1.09
DDX41-212ENST00000511040 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
DDX41-212ENST00000511040 KRTAP13-2Q52LG2 175 aa8.24□□□□□ -1.09
DDX41-212ENST00000511040 TYMSOSQ8TAI1 123 aa8.24□□□□□ -1.09
DDX41-212ENST00000511040 B5MCH6 92 aa8.23□□□□□ -1.09
DDX41-212ENST00000511040 SPATA45Q537H7 98 aa8.23□□□□□ -1.09
DDX41-212ENST00000511040 LINC00518Q8N0U6 118 aa8.23□□□□□ -1.09
DDX41-212ENST00000511040 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
DDX41-212ENST00000511040 VAMP8Q9BV40 100 aa8.23□□□□□ -1.09
DDX41-212ENST00000511040 TRAV23DV6A0A075B6W5 121 aa8.22□□□□□ -1.09
DDX41-212ENST00000511040 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
DDX41-212ENST00000511040 OR13C6PQ8NH95 151 aa8.22□□□□□ -1.09
DDX41-212ENST00000511040 SPRR4Q96PI1 79 aa8.22□□□□□ -1.09
DDX41-212ENST00000511040 SPANXCQ9NY87 97 aa8.22□□□□□ -1.09
DDX41-212ENST00000511040 TSPAN13O95857 204 aa8.21□□□□□ -1.1
DDX41-212ENST00000511040 C12orf57Q99622 126 aa8.21□□□□□ -1.1
DDX41-212ENST00000511040 SPANXDQ9BXN6 97 aa8.21□□□□□ -1.1
DDX41-212ENST00000511040 HSBP1L1C9JCN9 74 aa8.2□□□□□ -1.1
DDX41-212ENST00000511040 ERC2-IT1O76042 136 aa8.2□□□□□ -1.1
DDX41-212ENST00000511040 C14orf144Q96I85 54 aa8.2□□□□□ -1.1
DDX41-212ENST00000511040 PPDPFQ9H3Y8 114 aa8.2□□□□□ -1.1
DDX41-212ENST00000511040 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
DDX41-212ENST00000511040 C3orf22Q8N5N4 141 aa8.19□□□□□ -1.1
DDX41-212ENST00000511040 Q9BRP9 147 aa8.19□□□□□ -1.1
DDX41-212ENST00000511040 ZNF706Q9Y5V0 76 aaPredicted RBP8.19□□□□□ -1.1
DDX41-212ENST00000511040 COX8AP10176 69 aa8.18□□□□□ -1.1
DDX41-212ENST00000511040 Q6ZRX8 168 aa8.18□□□□□ -1.1
DDX41-212ENST00000511040 PRO1933Q9H354 126 aa8.18□□□□□ -1.1
DDX41-212ENST00000511040 MUSTN1Q8IVN3 82 aa8.17□□□□□ -1.1
DDX41-212ENST00000511040 GAGE2AQ6NT46 116 aa8.16□□□□□ -1.1
DDX41-212ENST00000511040 IFITM1P13164 125 aa8.15□□□□□ -1.1
DDX41-212ENST00000511040 LINC00304Q8N9R0 145 aa8.15□□□□□ -1.1
DDX41-212ENST00000511040 C2orf91Q6ZV80 131 aa8.14□□□□□ -1.11
DDX41-212ENST00000511040 Q6ZVH6 145 aa8.14□□□□□ -1.11
DDX41-212ENST00000511040 COPS9Q8WXC6 57 aa8.14□□□□□ -1.11
DDX41-212ENST00000511040 CBY1Q9Y3M2 126 aa8.14□□□□□ -1.11
DDX41-212ENST00000511040 DLEU1O43261 78 aa8.13□□□□□ -1.11
DDX41-212ENST00000511040 PRR4Q16378 134 aa8.13□□□□□ -1.11
DDX41-212ENST00000511040 LRP2P98164 4655 aa8.13□□□□□ -1.11
DDX41-212ENST00000511040 A6NDN8 102 aa8.12□□□□□ -1.11
DDX41-212ENST00000511040 HINT1P49773 126 aaPredicted RBP8.12□□□□□ -1.11
DDX41-212ENST00000511040 LINC00483Q53H64 154 aa8.12□□□□□ -1.11
DDX41-212ENST00000511040 ST20-AS1Q8NBB2 130 aa8.12□□□□□ -1.11
DDX41-212ENST00000511040 C6orf99Q4VX62 202 aa8.11□□□□□ -1.11
DDX41-212ENST00000511040 SLC25A34Q6PIV7 304 aa8.11□□□□□ -1.11
DDX41-212ENST00000511040 IGLV9-49A0A0B4J1Y8 123 aa8.09□□□□□ -1.11
DDX41-212ENST00000511040 COX7BP24311 80 aa8.09□□□□□ -1.11
DDX41-212ENST00000511040 Q8NBF4 154 aa8.09□□□□□ -1.11
DDX41-212ENST00000511040 MOBPQ13875 183 aa8.08□□□□□ -1.12
DDX41-212ENST00000511040 RETNLBQ9BQ08 111 aa8.08□□□□□ -1.12
DDX41-212ENST00000511040 UQCR10Q9UDW1 63 aa8.08□□□□□ -1.12
DDX41-212ENST00000511040 ELOF1P60002 83 aaKnown RBP8.07□□□□□ -1.12
DDX41-212ENST00000511040 RNF213Q63HN8 5207 aa8.07□□□□□ -1.12
DDX41-212ENST00000511040 A4D1N5 150 aa8.06□□□□□ -1.12
DDX41-212ENST00000511040 DHRS4-AS1Q9P1J3 65 aa8.06□□□□□ -1.12
DDX41-212ENST00000511040 HIGD1BQ9P298 99 aa8.06□□□□□ -1.12
DDX41-212ENST00000511040 LPAP08519 4548 aa8.05□□□□□ -1.12
DDX41-212ENST00000511040 TRAV13-2A0A0B4J235 113 aa8.05□□□□□ -1.12
DDX41-212ENST00000511040 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
DDX41-212ENST00000511040 HIST1H4GQ99525 98 aa8.05□□□□□ -1.12
DDX41-212ENST00000511040 SMIM11BQ8TCY0 68 aa8.04□□□□□ -1.12
DDX41-212ENST00000511040 C9orf153Q5TBE3 101 aa8.03□□□□□ -1.12
DDX41-212ENST00000511040 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
DDX41-212ENST00000511040 TRBV7-6A0A0J9YX20 115 aa8.02□□□□□ -1.13
DDX41-212ENST00000511040 A0A1B0GWB2 263 aa8.02□□□□□ -1.13
DDX41-212ENST00000511040 DEFB105AQ8NG35 78 aa8.02□□□□□ -1.13
DDX41-212ENST00000511040 TSTD3H0UI37 97 aa8.01□□□□□ -1.13
DDX41-212ENST00000511040 CTAG1AP78358 180 aa8□□□□□ -1.13
DDX41-212ENST00000511040 TAL2Q16559 108 aa8□□□□□ -1.13
DDX41-212ENST00000511040 SSBP3-AS1Q7Z2R9 100 aa8□□□□□ -1.13
DDX41-212ENST00000511040 SPRR1BP22528 89 aa7.99□□□□□ -1.13
DDX41-212ENST00000511040 FXYD2P54710 66 aa7.98□□□□□ -1.13
DDX41-212ENST00000511040 SPINK1P00995 79 aa7.97□□□□□ -1.13
DDX41-212ENST00000511040 HSD52Q0P140 79 aa7.97□□□□□ -1.13
DDX41-212ENST00000511040 Q1RN00 199 aa7.97□□□□□ -1.13
DDX41-212ENST00000511040 IGLV7-46A0A075B6I9 117 aa7.96□□□□□ -1.14
DDX41-212ENST00000511040 PCP4L1A6NKN8 68 aa7.96□□□□□ -1.14
DDX41-212ENST00000511040 CEND1Q8N111 149 aa7.96□□□□□ -1.14
DDX41-212ENST00000511040 LAMTOR3Q9UHA4 124 aa7.96□□□□□ -1.14
DDX41-212ENST00000511040 TEX49A0A1B0GTD5 131 aa7.95□□□□□ -1.14
DDX41-212ENST00000511040 H7C2G1 150 aa7.95□□□□□ -1.14
DDX41-212ENST00000511040 VAMP3Q15836 100 aa7.95□□□□□ -1.14
DDX41-212ENST00000511040 BVES-AS1Q5T3Y7 98 aa7.95□□□□□ -1.14
DDX41-212ENST00000511040 LINC01547P58512 204 aaPredicted RBP7.94□□□□□ -1.14
DDX41-212ENST00000511040 CFC1BP0CG36 223 aa7.93□□□□□ -1.14
DDX41-212ENST00000511040 CFC1P0CG37 223 aa7.93□□□□□ -1.14
DDX41-212ENST00000511040 HRCT1Q6UXD1 115 aa7.93□□□□□ -1.14
DDX41-212ENST00000511040 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
DDX41-212ENST00000511040 NHP2Q9NX24 153 aaKnown RBP7.93□□□□□ -1.14
DDX41-212ENST00000511040 IGLV5-48A0A075B6I7 105 aa7.92□□□□□ -1.14
DDX41-212ENST00000511040 SLC25A20O43772 301 aa7.92□□□□□ -1.14
DDX41-212ENST00000511040 SMIM29Q86T20 159 aa7.92□□□□□ -1.14
DDX41-212ENST00000511040 RAB37Q96AX2 223 aa7.92□□□□□ -1.14
DDX41-212ENST00000511040 Q8N377 158 aa7.91□□□□□ -1.14
DDX41-212ENST00000511040 K7ERJ3 54 aa7.9□□□□□ -1.14
DDX41-212ENST00000511040 SNHG12Q9BXW3 62 aa7.9□□□□□ -1.14
DDX41-212ENST00000511040 A0A0G2JQZ4 141 aa7.89□□□□□ -1.15
DDX41-212ENST00000511040 hADV29S1A0JD25 119 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms