RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 UBE2D1P51668 147 aa6.36□□□□□ -1.39
USP53-207ENST00000510852 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
USP53-207ENST00000510852 CHKB-CPT1BH3BT56 60 aa6.36□□□□□ -1.39
USP53-207ENST00000510852 DEFB130BP0DP73 79 aa6.36□□□□□ -1.39
USP53-207ENST00000510852 DEFB130AP0DP74 79 aa6.36□□□□□ -1.39
USP53-207ENST00000510852 LINC00612Q8N6U2 182 aa6.36□□□□□ -1.39
USP53-207ENST00000510852 KIF25-AS1Q9Y6Z4 181 aa6.36□□□□□ -1.39
USP53-207ENST00000510852 TRGV2A0A075B6R0 118 aa6.35□□□□□ -1.39
USP53-207ENST00000510852 FAM74A4Q5TZK3 123 aa6.35□□□□□ -1.39
USP53-207ENST00000510852 IGHV3-73A0A0B4J1V6 119 aa6.35□□□□□ -1.39
USP53-207ENST00000510852 A0A0J9YWU9 116 aa6.35□□□□□ -1.39
USP53-207ENST00000510852 SPART-AS1P0CW21 52 aa6.35□□□□□ -1.39
USP53-207ENST00000510852 LINC00315P59091 139 aa6.35□□□□□ -1.39
USP53-207ENST00000510852 CHCHD7Q9BUK0 85 aa6.35□□□□□ -1.39
USP53-207ENST00000510852 IGLV1-50A0A075B6I6 118 aa6.34□□□□□ -1.39
USP53-207ENST00000510852 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
USP53-207ENST00000510852 IGHV3-53P01767 116 aa6.34□□□□□ -1.39
USP53-207ENST00000510852 MGPP08493 103 aa6.34□□□□□ -1.39
USP53-207ENST00000510852 C2orf82Q6UX34 121 aa6.34□□□□□ -1.39
USP53-207ENST00000510852 Q8NBF4 154 aa6.34□□□□□ -1.39
USP53-207ENST00000510852 Q6ZQT0 140 aa6.34□□□□□ -1.4
USP53-207ENST00000510852 COL7A1Q02388 2944 aa6.33□□□□□ -1.4
USP53-207ENST00000510852 TLX1NBP0CAT3 122 aa6.33□□□□□ -1.4
USP53-207ENST00000510852 GAS8-AS1O95177 125 aa6.32□□□□□ -1.4
USP53-207ENST00000510852 ZNF815PA8K554 130 aa6.31□□□□□ -1.4
USP53-207ENST00000510852 D6R8Y8 96 aa6.31□□□□□ -1.4
USP53-207ENST00000510852 K7EMI3 77 aa6.31□□□□□ -1.4
USP53-207ENST00000510852 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
USP53-207ENST00000510852 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
USP53-207ENST00000510852 FBN3Q75N90 2809 aa6.31□□□□□ -1.4
USP53-207ENST00000510852 DNAH7Q8WXX0 4024 aa6.3□□□□□ -1.4
USP53-207ENST00000510852 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
USP53-207ENST00000510852 M0QY20 66 aa6.3□□□□□ -1.4
USP53-207ENST00000510852 Q6ZTC4 211 aa6.3□□□□□ -1.4
USP53-207ENST00000510852 BPY2O14599 106 aa6.29□□□□□ -1.4
USP53-207ENST00000510852 RPL39LQ96EH5 51 aaKnown RBP6.29□□□□□ -1.4
USP53-207ENST00000510852 HTN3P15516 51 aa6.29□□□□□ -1.4
USP53-207ENST00000510852 STAB2Q8WWQ8 2551 aa6.29□□□□□ -1.4
USP53-207ENST00000510852 DYNC2H1Q8NCM8 4307 aaKnown RBP6.29□□□□□ -1.4
USP53-207ENST00000510852 BAALC-AS2P0C853 105 aa6.28□□□□□ -1.4
USP53-207ENST00000510852 LIMD2Q9BT23 127 aa6.28□□□□□ -1.4
USP53-207ENST00000510852 TRBV6-4A0A1B0GX49 114 aa6.28□□□□□ -1.4
USP53-207ENST00000510852 PRO0255Q9UI72 69 aa6.27□□□□□ -1.41
USP53-207ENST00000510852 A0A087WVE0 104 aa6.27□□□□□ -1.41
USP53-207ENST00000510852 PPP1R17O96001 155 aa6.27□□□□□ -1.41
USP53-207ENST00000510852 NTM-AS1Q6ZSK4 140 aa6.27□□□□□ -1.41
USP53-207ENST00000510852 C15orf56Q8N910 161 aa6.27□□□□□ -1.41
USP53-207ENST00000510852 SNURFQ9Y675 71 aa6.27□□□□□ -1.41
USP53-207ENST00000510852 TRBV10-1A0A0K0K1A3 114 aa6.26□□□□□ -1.41
USP53-207ENST00000510852 P0C880 135 aa6.26□□□□□ -1.41
USP53-207ENST00000510852 A0A0J9YY99 117 aa6.26□□□□□ -1.41
USP53-207ENST00000510852 TRBV6-5A0A0K0K1A5 114 aa6.26□□□□□ -1.41
USP53-207ENST00000510852 DEFB131BA0A096LNP1 70 aa6.25□□□□□ -1.41
USP53-207ENST00000510852 CDC42SE2Q9NRR3 84 aa6.25□□□□□ -1.41
USP53-207ENST00000510852 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
USP53-207ENST00000510852 ICOSQ9Y6W8 199 aa6.25□□□□□ -1.41
USP53-207ENST00000510852 TRAV10A0A0B4J240 114 aa6.24□□□□□ -1.41
USP53-207ENST00000510852 A8MUU9 505 aa6.24□□□□□ -1.41
USP53-207ENST00000510852 H7C423 109 aa6.24□□□□□ -1.41
USP53-207ENST00000510852 FCER1GP30273 86 aa6.24□□□□□ -1.41
USP53-207ENST00000510852 POLR2KP53803 58 aaKnown RBP6.24□□□□□ -1.41
USP53-207ENST00000510852 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
USP53-207ENST00000510852 PLECQ15149 4684 aaKnown RBP6.24□□□□□ -1.41
USP53-207ENST00000510852 SMIM2Q9BVW6 85 aa6.24□□□□□ -1.41
USP53-207ENST00000510852 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
USP53-207ENST00000510852 DNAH10OSP0CZ25 163 aa6.23□□□□□ -1.41
USP53-207ENST00000510852 ATP5EP2Q5VTU8 51 aa6.23□□□□□ -1.41
USP53-207ENST00000510852 MUC7Q8TAX7 377 aa6.23□□□□□ -1.41
USP53-207ENST00000510852 DEFB104AQ8WTQ1 72 aa6.23□□□□□ -1.41
USP53-207ENST00000510852 I3L3M4 83 aa6.22□□□□□ -1.41
USP53-207ENST00000510852 ERC2-IT1O76042 136 aa6.22□□□□□ -1.41
USP53-207ENST00000510852 COX6CP09669 75 aa6.22□□□□□ -1.41
USP53-207ENST00000510852 STARD9Q9P2P6 4700 aa6.22□□□□□ -1.41
USP53-207ENST00000510852 PSCAO43653 123 aa6.21□□□□□ -1.41
USP53-207ENST00000510852 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.41
USP53-207ENST00000510852 CSMD3Q7Z407 3707 aa6.21□□□□□ -1.41
USP53-207ENST00000510852 A0A096LPF7 62 aa6.21□□□□□ -1.42
USP53-207ENST00000510852 H3BNG1 76 aa6.21□□□□□ -1.42
USP53-207ENST00000510852 TGP01266 2768 aa6.21□□□□□ -1.42
USP53-207ENST00000510852 LINC01546A6NGU7 62 aa6.2□□□□□ -1.42
USP53-207ENST00000510852 IGKV3D-7A0A0C4DH55 119 aa6.19□□□□□ -1.42
USP53-207ENST00000510852 MIR7-3HGQ8N6C7 128 aa6.19□□□□□ -1.42
USP53-207ENST00000510852 TRBV6-8A0A0A6YYG3 113 aa6.19□□□□□ -1.42
USP53-207ENST00000510852 H7C2G1 150 aa6.19□□□□□ -1.42
USP53-207ENST00000510852 TRAV23DV6A0A075B6W5 121 aa6.18□□□□□ -1.42
USP53-207ENST00000510852 A0A096LNJ9 63 aa6.17□□□□□ -1.42
USP53-207ENST00000510852 TRBV7-4A0A0J9YYF1 115 aa6.17□□□□□ -1.42
USP53-207ENST00000510852 LOC101927531A0A1B0GV80 90 aa6.17□□□□□ -1.42
USP53-207ENST00000510852 LYSTQ99698 3801 aa6.17□□□□□ -1.42
USP53-207ENST00000510852 NUPR2A6NF83 97 aa6.16□□□□□ -1.42
USP53-207ENST00000510852 MUSTN1Q8IVN3 82 aa6.16□□□□□ -1.42
USP53-207ENST00000510852 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.15□□□□□ -1.42
USP53-207ENST00000510852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.15□□□□□ -1.42
USP53-207ENST00000510852 TRBV30A0A0K0K1B3 111 aa6.15□□□□□ -1.42
USP53-207ENST00000510852 IGKV2-29A2NJV5 120 aaPredicted RBP6.15□□□□□ -1.42
USP53-207ENST00000510852 C11orf86A6NJI1 115 aa6.15□□□□□ -1.42
USP53-207ENST00000510852 RPL39P62891 51 aaKnown RBP6.15□□□□□ -1.42
USP53-207ENST00000510852 CSAG1Q6PB30 78 aa6.15□□□□□ -1.42
USP53-207ENST00000510852 C14orf132Q9NPU4 83 aa6.15□□□□□ -1.42
USP53-207ENST00000510852 RTL8CO15255 209 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms