RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 SOSTDC1Q6X4U4 206 aa15.06■□□□□ 0
SNF8-208ENST00000510195 C5orf52A6NGY3 159 aa15.05■□□□□ -0
SNF8-208ENST00000510195 ZNF73O43830 326 aaPredicted RBP15.05■□□□□ -0
SNF8-208ENST00000510195 KRTAP13-3Q3SY46 172 aa15.05■□□□□ -0
SNF8-208ENST00000510195 LCE2AQ5TA79 106 aaPredicted RBP15.05■□□□□ -0
SNF8-208ENST00000510195 SYS1-DBNDD2H3BUS1 97 aa15.03■□□□□ -0
SNF8-208ENST00000510195 EIF4EBP3O60516 100 aaPredicted RBP15.02■□□□□ -0
SNF8-208ENST00000510195 HINT1P49773 126 aaPredicted RBP15.02■□□□□ -0
SNF8-208ENST00000510195 NPC2P61916 151 aa15.02■□□□□ -0
SNF8-208ENST00000510195 Q8N377 158 aa15□□□□□ -0.01
SNF8-208ENST00000510195 SPANXCQ9NY87 97 aa15□□□□□ -0.01
SNF8-208ENST00000510195 TIMM17BO60830 172 aa14.99□□□□□ -0.01
SNF8-208ENST00000510195 SLC25A20O43772 301 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST1H2BKO60814 126 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST1H2BJP06899 126 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST1H2BOP23527 126 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST1H2BBP33778 126 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST1H2BDP58876 126 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST1H2BCP62807 126 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST2H2BEQ16778 126 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST1H2BHQ93079 126 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST1H2BNQ99877 126 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 HIST1H2BMQ99879 126 aa14.98□□□□□ -0.01
SNF8-208ENST00000510195 LINC01545Q5VT33 79 aa14.97□□□□□ -0.01
SNF8-208ENST00000510195 LINC00308Q8TCZ7 52 aa14.97□□□□□ -0.01
SNF8-208ENST00000510195 LITAFQ99732 161 aa14.97□□□□□ -0.01
SNF8-208ENST00000510195 PET117Q6UWS5 81 aa14.96□□□□□ -0.01
SNF8-208ENST00000510195 ASB16-AS1Q495Z4 193 aa14.95□□□□□ -0.02
SNF8-208ENST00000510195 C9orf153Q5TBE3 101 aa14.93□□□□□ -0.02
SNF8-208ENST00000510195 OR13C6PQ8NH95 151 aa14.91□□□□□ -0.02
SNF8-208ENST00000510195 SPANXDQ9BXN6 97 aa14.91□□□□□ -0.02
SNF8-208ENST00000510195 DHRS4-AS1Q9P1J3 65 aa14.91□□□□□ -0.02
SNF8-208ENST00000510195 SLC25A34Q6PIV7 304 aa14.9□□□□□ -0.02
SNF8-208ENST00000510195 ST20-AS1Q8NBB2 130 aa14.9□□□□□ -0.02
SNF8-208ENST00000510195 ZNF815PA8K554 130 aa14.89□□□□□ -0.03
SNF8-208ENST00000510195 LINC00518Q8N0U6 118 aa14.89□□□□□ -0.03
SNF8-208ENST00000510195 SPRR1BP22528 89 aa14.88□□□□□ -0.03
SNF8-208ENST00000510195 SEC61BP60468 96 aaKnown RBP14.88□□□□□ -0.03
SNF8-208ENST00000510195 KRTAP9-2Q9BYQ4 174 aa14.84□□□□□ -0.03
SNF8-208ENST00000510195 C3orf79P0CE67 100 aa14.83□□□□□ -0.04
SNF8-208ENST00000510195 ELOF1P60002 83 aaKnown RBP14.81□□□□□ -0.04
SNF8-208ENST00000510195 COA6Q5JTJ3 125 aaKnown RBP14.81□□□□□ -0.04
SNF8-208ENST00000510195 LAMTOR3Q9UHA4 124 aa14.8□□□□□ -0.04
SNF8-208ENST00000510195 COX7BP24311 80 aa14.79□□□□□ -0.04
SNF8-208ENST00000510195 XP32Q5T750 250 aa14.79□□□□□ -0.04
SNF8-208ENST00000510195 COPS9Q8WXC6 57 aa14.79□□□□□ -0.04
SNF8-208ENST00000510195 TTTY13Q9BZ97 58 aa14.79□□□□□ -0.04
SNF8-208ENST00000510195 LIMD2Q9BT23 127 aa14.78□□□□□ -0.04
SNF8-208ENST00000510195 TRBV7-6A0A0J9YX20 115 aa14.77□□□□□ -0.05
SNF8-208ENST00000510195 C6orf99Q4VX62 202 aa14.77□□□□□ -0.05
SNF8-208ENST00000510195 KRTDAPP60985 99 aa14.75□□□□□ -0.05
SNF8-208ENST00000510195 SCGB1D4Q6XE38 83 aa14.75□□□□□ -0.05
SNF8-208ENST00000510195 C20orf202A1L168 122 aa14.74□□□□□ -0.05
SNF8-208ENST00000510195 IFITM1P13164 125 aa14.74□□□□□ -0.05
SNF8-208ENST00000510195 Q6ZVH6 145 aa14.74□□□□□ -0.05
SNF8-208ENST00000510195 AKR1D1P51857 326 aa14.72□□□□□ -0.05
SNF8-208ENST00000510195 TAL2Q16559 108 aa14.72□□□□□ -0.05
SNF8-208ENST00000510195 KRTAP4-1Q9BYQ7 146 aa14.71□□□□□ -0.05
SNF8-208ENST00000510195 TEX49A0A1B0GTD5 131 aa14.7□□□□□ -0.06
SNF8-208ENST00000510195 CD164Q04900 197 aa14.7□□□□□ -0.06
SNF8-208ENST00000510195 A0A1B0GWB2 263 aa14.68□□□□□ -0.06
SNF8-208ENST00000510195 LINC01547P58512 204 aaPredicted RBP14.68□□□□□ -0.06
SNF8-208ENST00000510195 PRO1933Q9H354 126 aa14.67□□□□□ -0.06
SNF8-208ENST00000510195 ANKRD39Q53RE8 183 aa14.66□□□□□ -0.06
SNF8-208ENST00000510195 HRCT1Q6UXD1 115 aa14.66□□□□□ -0.06
SNF8-208ENST00000510195 DEFB105AQ8NG35 78 aa14.65□□□□□ -0.06
SNF8-208ENST00000510195 A4D1N5 150 aa14.63□□□□□ -0.07
SNF8-208ENST00000510195 A6NDN8 102 aa14.63□□□□□ -0.07
SNF8-208ENST00000510195 Q1RN00 199 aa14.63□□□□□ -0.07
SNF8-208ENST00000510195 IGLV5-48A0A075B6I7 105 aa14.61□□□□□ -0.07
SNF8-208ENST00000510195 MUSTN1Q8IVN3 82 aa14.61□□□□□ -0.07
SNF8-208ENST00000510195 SNRPEP62304 92 aaKnown RBP14.6□□□□□ -0.07
SNF8-208ENST00000510195 Q5XG85 94 aa14.6□□□□□ -0.07
SNF8-208ENST00000510195 TRAV13-2A0A0B4J235 113 aa14.59□□□□□ -0.07
SNF8-208ENST00000510195 H7C2G1 150 aa14.59□□□□□ -0.07
SNF8-208ENST00000510195 SMIM29Q86T20 159 aa14.59□□□□□ -0.07
SNF8-208ENST00000510195 PCP2Q8IVA1 136 aa14.58□□□□□ -0.08
SNF8-208ENST00000510195 ATOH7Q8N100 152 aa14.58□□□□□ -0.08
SNF8-208ENST00000510195 NHP2Q9NX24 153 aaKnown RBP14.58□□□□□ -0.08
SNF8-208ENST00000510195 C9orf92A6NGG3 77 aa14.5□□□□□ -0.09
SNF8-208ENST00000510195 SMIM11BQ8TCY0 68 aa14.5□□□□□ -0.09
SNF8-208ENST00000510195 PCOTHQ58A44 107 aa14.47□□□□□ -0.09
SNF8-208ENST00000510195 VAMP3Q15836 100 aa14.46□□□□□ -0.09
SNF8-208ENST00000510195 C1orf195Q5TG92 126 aa14.46□□□□□ -0.09
SNF8-208ENST00000510195 IGLV8-61A0A075B6I0 122 aa14.42□□□□□ -0.1
SNF8-208ENST00000510195 HSBP1L1C9JCN9 74 aa14.41□□□□□ -0.1
SNF8-208ENST00000510195 LCE2CQ5TA81 110 aa14.41□□□□□ -0.1
SNF8-208ENST00000510195 KRTAP9-6A0A140TA67 174 aa14.4□□□□□ -0.1
SNF8-208ENST00000510195 TCL1BO95988 128 aa14.4□□□□□ -0.1
SNF8-208ENST00000510195 HIST3H2BBQ8N257 126 aa14.4□□□□□ -0.1
SNF8-208ENST00000510195 S100A2P29034 98 aa14.39□□□□□ -0.11
SNF8-208ENST00000510195 HIST1H2BLQ99880 126 aa14.39□□□□□ -0.11
SNF8-208ENST00000510195 A0A0G2JQZ4 141 aa14.38□□□□□ -0.11
SNF8-208ENST00000510195 F8WEM9 126 aa14.38□□□□□ -0.11
SNF8-208ENST00000510195 LINC00575Q6W349 94 aa14.38□□□□□ -0.11
SNF8-208ENST00000510195 KRTAP19-2Q3LHN2 52 aa14.36□□□□□ -0.11
SNF8-208ENST00000510195 hADV29S1A0JD25 119 aa14.34□□□□□ -0.11
SNF8-208ENST00000510195 LCE2DQ5TA82 110 aaPredicted RBP14.34□□□□□ -0.11
SNF8-208ENST00000510195 Q6JHZ5 121 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms