RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 C9orf153Q5TBE3 101 aa5.78□□□□□ -1.48
SCARB2-204ENST00000509994 TRBV10-2A0A0K0K1G8 114 aa5.77□□□□□ -1.49
SCARB2-204ENST00000509994 JOSD1Q15040 202 aaPredicted RBP5.77□□□□□ -1.49
SCARB2-204ENST00000509994 TRAV23DV6A0A075B6W5 121 aa5.76□□□□□ -1.49
SCARB2-204ENST00000509994 KRTAP4-16G5E9R7 235 aaPredicted RBP5.76□□□□□ -1.49
SCARB2-204ENST00000509994 ERC2-IT1O76042 136 aa5.76□□□□□ -1.49
SCARB2-204ENST00000509994 Q6ZRX8 168 aa5.76□□□□□ -1.49
SCARB2-204ENST00000509994 HINT1P49773 126 aaPredicted RBP5.75□□□□□ -1.49
SCARB2-204ENST00000509994 LINC00483Q53H64 154 aa5.75□□□□□ -1.49
SCARB2-204ENST00000509994 LINC00310P59036 64 aa5.74□□□□□ -1.49
SCARB2-204ENST00000509994 OR13C6PQ8NH95 151 aa5.74□□□□□ -1.49
SCARB2-204ENST00000509994 Q9BRP9 147 aa5.74□□□□□ -1.49
SCARB2-204ENST00000509994 LOC107984156A0A0G2JMH3 177 aa5.73□□□□□ -1.49
SCARB2-204ENST00000509994 ZNF73O43830 326 aaPredicted RBP5.73□□□□□ -1.49
SCARB2-204ENST00000509994 NDUFC2O95298 119 aa5.73□□□□□ -1.49
SCARB2-204ENST00000509994 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
SCARB2-204ENST00000509994 SSBP3-AS1Q7Z2R9 100 aa5.73□□□□□ -1.49
SCARB2-204ENST00000509994 ARL17AQ8IVW1 177 aa5.73□□□□□ -1.49
SCARB2-204ENST00000509994 CBY1Q9Y3M2 126 aa5.73□□□□□ -1.49
SCARB2-204ENST00000509994 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
SCARB2-204ENST00000509994 A0A0J9YXY3 114 aa5.72□□□□□ -1.49
SCARB2-204ENST00000509994 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
SCARB2-204ENST00000509994 SLC25A20O43772 301 aa5.72□□□□□ -1.49
SCARB2-204ENST00000509994 IGLV6-57P01721 117 aa5.72□□□□□ -1.49
SCARB2-204ENST00000509994 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
SCARB2-204ENST00000509994 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
SCARB2-204ENST00000509994 E9PLD3 99 aa5.7□□□□□ -1.5
SCARB2-204ENST00000509994 ADAMTSL4-AS1Q5T5F5 129 aa5.7□□□□□ -1.5
SCARB2-204ENST00000509994 SOSTDC1Q6X4U4 206 aa5.7□□□□□ -1.5
SCARB2-204ENST00000509994 SLC7A5P1Q8MH63 180 aa5.7□□□□□ -1.5
SCARB2-204ENST00000509994 Q8N377 158 aa5.7□□□□□ -1.5
SCARB2-204ENST00000509994 ST20-AS1Q8NBB2 130 aa5.7□□□□□ -1.5
SCARB2-204ENST00000509994 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
SCARB2-204ENST00000509994 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
SCARB2-204ENST00000509994 HRCT1Q6UXD1 115 aa5.69□□□□□ -1.5
SCARB2-204ENST00000509994 ZNF815PA8K554 130 aa5.68□□□□□ -1.5
SCARB2-204ENST00000509994 SYS1-DBNDD2H3BUS1 97 aa5.68□□□□□ -1.5
SCARB2-204ENST00000509994 LINC01547P58512 204 aaPredicted RBP5.68□□□□□ -1.5
SCARB2-204ENST00000509994 ASB16-AS1Q495Z4 193 aa5.68□□□□□ -1.5
SCARB2-204ENST00000509994 SLC25A34Q6PIV7 304 aa5.68□□□□□ -1.5
SCARB2-204ENST00000509994 SPANXCQ9NY87 97 aa5.68□□□□□ -1.5
SCARB2-204ENST00000509994 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
SCARB2-204ENST00000509994 COLCA2A8K830 154 aa5.67□□□□□ -1.5
SCARB2-204ENST00000509994 LINC00308Q8TCZ7 52 aa5.67□□□□□ -1.5
SCARB2-204ENST00000509994 LIMD2Q9BT23 127 aa5.67□□□□□ -1.5
SCARB2-204ENST00000509994 DHRS4-AS1Q9P1J3 65 aa5.67□□□□□ -1.5
SCARB2-204ENST00000509994 DEFB105AQ8NG35 78 aa5.66□□□□□ -1.5
SCARB2-204ENST00000509994 LAMTOR3Q9UHA4 124 aa5.66□□□□□ -1.5
SCARB2-204ENST00000509994 TIMM17BO60830 172 aa5.65□□□□□ -1.5
SCARB2-204ENST00000509994 COX7BP24311 80 aa5.65□□□□□ -1.5
SCARB2-204ENST00000509994 TAL2Q16559 108 aa5.65□□□□□ -1.5
SCARB2-204ENST00000509994 SCGB1D4Q6XE38 83 aa5.65□□□□□ -1.5
SCARB2-204ENST00000509994 SPANXDQ9BXN6 97 aa5.65□□□□□ -1.5
SCARB2-204ENST00000509994 C5orf52A6NGY3 159 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST1H2BKO60814 126 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST1H2BJP06899 126 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST1H2BOP23527 126 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST1H2BBP33778 126 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST1H2BDP58876 126 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST1H2BCP62807 126 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST2H2BEQ16778 126 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 Q1RN00 199 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.64□□□□□ -1.51
SCARB2-204ENST00000509994 PET117Q6UWS5 81 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST1H2BHQ93079 126 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST1H2BNQ99877 126 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 HIST1H2BMQ99879 126 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 TTTY13Q9BZ97 58 aa5.64□□□□□ -1.51
SCARB2-204ENST00000509994 KRTDAPP60985 99 aa5.63□□□□□ -1.51
SCARB2-204ENST00000509994 C6orf99Q4VX62 202 aa5.63□□□□□ -1.51
SCARB2-204ENST00000509994 LINC01545Q5VT33 79 aa5.63□□□□□ -1.51
SCARB2-204ENST00000509994 LINC00518Q8N0U6 118 aa5.63□□□□□ -1.51
SCARB2-204ENST00000509994 LITAFQ99732 161 aa5.63□□□□□ -1.51
SCARB2-204ENST00000509994 C20orf202A1L168 122 aa5.62□□□□□ -1.51
SCARB2-204ENST00000509994 C9orf92A6NGG3 77 aa5.62□□□□□ -1.51
SCARB2-204ENST00000509994 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
SCARB2-204ENST00000509994 COPS9Q8WXC6 57 aa5.62□□□□□ -1.51
SCARB2-204ENST00000509994 A6NDN8 102 aa5.61□□□□□ -1.51
SCARB2-204ENST00000509994 C3orf79P0CE67 100 aa5.61□□□□□ -1.51
SCARB2-204ENST00000509994 ELOF1P60002 83 aaKnown RBP5.61□□□□□ -1.51
SCARB2-204ENST00000509994 H7C2G1 150 aa5.6□□□□□ -1.51
SCARB2-204ENST00000509994 TEX49A0A1B0GTD5 131 aa5.59□□□□□ -1.51
SCARB2-204ENST00000509994 SPRR1BP22528 89 aa5.59□□□□□ -1.51
SCARB2-204ENST00000509994 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.51
SCARB2-204ENST00000509994 PRO1933Q9H354 126 aa5.59□□□□□ -1.51
SCARB2-204ENST00000509994 ATOH7Q8N100 152 aa5.58□□□□□ -1.52
SCARB2-204ENST00000509994 A0A1B0GWB2 263 aa5.57□□□□□ -1.52
SCARB2-204ENST00000509994 PCOTHQ58A44 107 aa5.57□□□□□ -1.52
SCARB2-204ENST00000509994 IGLV8-61A0A075B6I0 122 aa5.56□□□□□ -1.52
SCARB2-204ENST00000509994 IFITM1P13164 125 aa5.56□□□□□ -1.52
SCARB2-204ENST00000509994 PCP4P48539 62 aa5.56□□□□□ -1.52
SCARB2-204ENST00000509994 AKR1D1P51857 326 aa5.56□□□□□ -1.52
SCARB2-204ENST00000509994 TRBV7-6A0A0J9YX20 115 aa5.55□□□□□ -1.52
SCARB2-204ENST00000509994 CD164Q04900 197 aa5.55□□□□□ -1.52
SCARB2-204ENST00000509994 KRTAP4-12Q9BQ66 201 aa5.55□□□□□ -1.52
SCARB2-204ENST00000509994 NHP2Q9NX24 153 aaKnown RBP5.55□□□□□ -1.52
SCARB2-204ENST00000509994 TRAV13-2A0A0B4J235 113 aa5.54□□□□□ -1.52
SCARB2-204ENST00000509994 F8WEM9 126 aa5.54□□□□□ -1.52
SCARB2-204ENST00000509994 Q6ZVH6 145 aa5.54□□□□□ -1.52
SCARB2-204ENST00000509994 MUSTN1Q8IVN3 82 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms