RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 JOSD1Q15040 202 aaPredicted RBP8.68□□□□□ -1.02
TPM3-219ENST00000509409 KRTAP13-3Q3SY46 172 aa8.68□□□□□ -1.02
TPM3-219ENST00000509409 Q9BRP9 147 aa8.68□□□□□ -1.02
TPM3-219ENST00000509409 KRTAP9-2Q9BYQ4 174 aa8.68□□□□□ -1.02
TPM3-219ENST00000509409 TRAV23DV6A0A075B6W5 121 aa8.67□□□□□ -1.02
TPM3-219ENST00000509409 Q6ZRX8 168 aa8.67□□□□□ -1.02
TPM3-219ENST00000509409 IGLV6-57P01721 117 aa8.66□□□□□ -1.02
TPM3-219ENST00000509409 C9orf153Q5TBE3 101 aa8.66□□□□□ -1.02
TPM3-219ENST00000509409 KRTAP4-8Q9BYQ9 185 aa8.66□□□□□ -1.02
TPM3-219ENST00000509409 HINT1P49773 126 aaPredicted RBP8.65□□□□□ -1.02
TPM3-219ENST00000509409 A0A0J9YXY3 114 aa8.64□□□□□ -1.03
TPM3-219ENST00000509409 SLC25A20O43772 301 aa8.64□□□□□ -1.03
TPM3-219ENST00000509409 ZNF73O43830 326 aaPredicted RBP8.63□□□□□ -1.03
TPM3-219ENST00000509409 RPS29P62273 56 aaKnown RBP8.63□□□□□ -1.03
TPM3-219ENST00000509409 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
TPM3-219ENST00000509409 ADAMTSL4-AS1Q5T5F5 129 aa8.63□□□□□ -1.03
TPM3-219ENST00000509409 SOSTDC1Q6X4U4 206 aa8.63□□□□□ -1.03
TPM3-219ENST00000509409 Q8N377 158 aa8.63□□□□□ -1.03
TPM3-219ENST00000509409 SEC61BP60468 96 aaKnown RBP8.62□□□□□ -1.03
TPM3-219ENST00000509409 CBY1Q9Y3M2 126 aa8.62□□□□□ -1.03
TPM3-219ENST00000509409 COLCA2A8K830 154 aa8.61□□□□□ -1.03
TPM3-219ENST00000509409 E9PLD3 99 aa8.61□□□□□ -1.03
TPM3-219ENST00000509409 EIF4EBP3O60516 100 aaPredicted RBP8.61□□□□□ -1.03
TPM3-219ENST00000509409 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
TPM3-219ENST00000509409 OR13C6PQ8NH95 151 aa8.61□□□□□ -1.03
TPM3-219ENST00000509409 SLC7A5P1Q8MH63 180 aa8.59□□□□□ -1.03
TPM3-219ENST00000509409 LINC00308Q8TCZ7 52 aa8.57□□□□□ -1.04
TPM3-219ENST00000509409 C5orf52A6NGY3 159 aa8.56□□□□□ -1.04
TPM3-219ENST00000509409 SYS1-DBNDD2H3BUS1 97 aa8.56□□□□□ -1.04
TPM3-219ENST00000509409 LINC01547P58512 204 aaPredicted RBP8.56□□□□□ -1.04
TPM3-219ENST00000509409 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
TPM3-219ENST00000509409 HRCT1Q6UXD1 115 aa8.55□□□□□ -1.04
TPM3-219ENST00000509409 SLC25A34Q6PIV7 304 aa8.54□□□□□ -1.04
TPM3-219ENST00000509409 KRTAP4-1Q9BYQ7 146 aa8.54□□□□□ -1.04
TPM3-219ENST00000509409 DHRS4-AS1Q9P1J3 65 aa8.54□□□□□ -1.04
TPM3-219ENST00000509409 ZNF815PA8K554 130 aa8.53□□□□□ -1.04
TPM3-219ENST00000509409 TIMM17BO60830 172 aa8.53□□□□□ -1.04
TPM3-219ENST00000509409 LITAFQ99732 161 aa8.53□□□□□ -1.04
TPM3-219ENST00000509409 LAMTOR3Q9UHA4 124 aa8.53□□□□□ -1.04
TPM3-219ENST00000509409 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
TPM3-219ENST00000509409 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
TPM3-219ENST00000509409 COX7BP24311 80 aa8.51□□□□□ -1.05
TPM3-219ENST00000509409 LINC01545Q5VT33 79 aa8.51□□□□□ -1.05
TPM3-219ENST00000509409 PET117Q6UWS5 81 aa8.51□□□□□ -1.05
TPM3-219ENST00000509409 LINC00518Q8N0U6 118 aa8.51□□□□□ -1.05
TPM3-219ENST00000509409 HIST1H2BKO60814 126 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 HIST1H2BJP06899 126 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 SPRR1BP22528 89 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 HIST1H2BOP23527 126 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 HIST1H2BBP33778 126 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 HIST1H2BDP58876 126 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 HIST1H2BCP62807 126 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 TAL2Q16559 108 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 HIST2H2BEQ16778 126 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.5□□□□□ -1.05
TPM3-219ENST00000509409 DEFB105AQ8NG35 78 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 HIST1H2BHQ93079 126 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 HIST1H2BNQ99877 126 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 HIST1H2BMQ99879 126 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
TPM3-219ENST00000509409 TTTY13Q9BZ97 58 aa8.49□□□□□ -1.05
TPM3-219ENST00000509409 C6orf99Q4VX62 202 aa8.48□□□□□ -1.05
TPM3-219ENST00000509409 KRTAP9-6A0A140TA67 174 aa8.47□□□□□ -1.05
TPM3-219ENST00000509409 ELOF1P60002 83 aaKnown RBP8.47□□□□□ -1.05
TPM3-219ENST00000509409 Q1RN00 199 aa8.46□□□□□ -1.06
TPM3-219ENST00000509409 SCGB1D4Q6XE38 83 aa8.46□□□□□ -1.06
TPM3-219ENST00000509409 C3orf79P0CE67 100 aa8.45□□□□□ -1.06
TPM3-219ENST00000509409 KRTDAPP60985 99 aa8.45□□□□□ -1.06
TPM3-219ENST00000509409 TEX49A0A1B0GTD5 131 aa8.44□□□□□ -1.06
TPM3-219ENST00000509409 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
TPM3-219ENST00000509409 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
TPM3-219ENST00000509409 PRO1933Q9H354 126 aa8.44□□□□□ -1.06
TPM3-219ENST00000509409 A6NDN8 102 aa8.42□□□□□ -1.06
TPM3-219ENST00000509409 H7C2G1 150 aa8.42□□□□□ -1.06
TPM3-219ENST00000509409 TRBV7-6A0A0J9YX20 115 aa8.41□□□□□ -1.06
TPM3-219ENST00000509409 C20orf202A1L168 122 aa8.41□□□□□ -1.06
TPM3-219ENST00000509409 CD164Q04900 197 aa8.41□□□□□ -1.06
TPM3-219ENST00000509409 PCOTHQ58A44 107 aa8.41□□□□□ -1.06
TPM3-219ENST00000509409 A0A1B0GWB2 263 aa8.4□□□□□ -1.06
TPM3-219ENST00000509409 IFITM1P13164 125 aa8.4□□□□□ -1.06
TPM3-219ENST00000509409 AKR1D1P51857 326 aa8.4□□□□□ -1.06
TPM3-219ENST00000509409 IGLV8-61A0A075B6I0 122 aa8.39□□□□□ -1.07
TPM3-219ENST00000509409 ANKRD39Q53RE8 183 aa8.38□□□□□ -1.07
TPM3-219ENST00000509409 MUSTN1Q8IVN3 82 aa8.38□□□□□ -1.07
TPM3-219ENST00000509409 Q6ZVH6 145 aa8.37□□□□□ -1.07
TPM3-219ENST00000509409 ATOH7Q8N100 152 aa8.37□□□□□ -1.07
TPM3-219ENST00000509409 SMIM29Q86T20 159 aa8.36□□□□□ -1.07
TPM3-219ENST00000509409 COA6Q5JTJ3 125 aaKnown RBP8.35□□□□□ -1.07
TPM3-219ENST00000509409 TRAV13-2A0A0B4J235 113 aa8.34□□□□□ -1.07
TPM3-219ENST00000509409 A0A0G2JQZ4 141 aa8.34□□□□□ -1.07
TPM3-219ENST00000509409 A4D1N5 150 aa8.34□□□□□ -1.07
TPM3-219ENST00000509409 PCP2Q8IVA1 136 aa8.34□□□□□ -1.07
TPM3-219ENST00000509409 NHP2Q9NX24 153 aaKnown RBP8.34□□□□□ -1.07
TPM3-219ENST00000509409 C1orf195Q5TG92 126 aa8.33□□□□□ -1.08
TPM3-219ENST00000509409 IGLV5-48A0A075B6I7 105 aa8.32□□□□□ -1.08
TPM3-219ENST00000509409 Q5XG85 94 aa8.32□□□□□ -1.08
TPM3-219ENST00000509409 SMIM11BQ8TCY0 68 aa8.31□□□□□ -1.08
TPM3-219ENST00000509409 VAMP3Q15836 100 aa8.3□□□□□ -1.08
TPM3-219ENST00000509409 TCL1BO95988 128 aa8.29□□□□□ -1.08
TPM3-219ENST00000509409 F8WEM9 126 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms