RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 LINC00474Q9P2X8 69 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 TRBV20OR9-2A0A075B6H5 130 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 GVQW2A0A096LPI5 108 aaPredicted RBP0.71□□□□□ -2.3
SNX2-208ENST00000509281 IGHV1-58A0A0C4DH39 117 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 NAP1L6A6NFF2 107 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 M0QY20 66 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 MGPP08493 103 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 SMIM17P0DL12 118 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 TMBIM6P55061 237 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 FOXA3P55318 350 aaPredicted RBP0.71□□□□□ -2.3
SNX2-208ENST00000509281 UBE2BP63146 152 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 MT1HP80294 61 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 KHDC3LQ587J8 217 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 BAGE2Q86Y30 109 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 STX12Q86Y82 276 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 C5orf17Q8NAS9 161 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 NUP35Q8NFH5 326 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 MBD3L1Q8WWY6 194 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 CARD19Q96LW7 228 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 NIT2Q9NQR4 276 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 ZFP30Q9Y2G7 519 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 ARL2-SNX15V9GYD0 113 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 V9GYH0 126 aa0.71□□□□□ -2.3
SNX2-208ENST00000509281 IGKV2D-26A0A0A0MRZ7 120 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 TRAV13-1A0A0B4J241 112 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 CCDC160A6NGH7 325 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 M0R2T5 61 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 MPC2O95563 127 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 S100A5P33763 92 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 FXYD2P54710 66 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 UBE2G1P62253 170 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 ZNF345Q14585 488 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 ASB16-AS1Q495Z4 193 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 Q5BKY6 102 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 TRIQKQ629K1 86 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 TSKUQ8WUA8 353 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 RPL39LQ96EH5 51 aaKnown RBP0.7□□□□□ -2.3
SNX2-208ENST00000509281 BTF3L4Q96K17 158 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 MRPS26Q9BYN8 205 aaKnown RBP0.7□□□□□ -2.3
SNX2-208ENST00000509281 CDC42SE2Q9NRR3 84 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 TMEM167BQ9NRX6 74 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 PKIGQ9Y2B9 76 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 C22orf24Q9Y442 160 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 HSPB11Q9Y547 144 aa0.7□□□□□ -2.3
SNX2-208ENST00000509281 A0A1B0GV50 99 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 A0A1W2PRE2 83 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 ZNF727A8MUV8 499 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 C1orf196B1AJZ1 125 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 LYRM1O43325 122 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 IFNA1P01562 189 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 IL7P13232 177 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 RPS20P60866 119 aaKnown RBP0.69□□□□□ -2.3
SNX2-208ENST00000509281 SERF2P84101 59 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 KRTAP19-2Q3LHN2 52 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 C2orf82Q6UX34 121 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 Q86TA4 180 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 SFT2D1Q8WV19 159 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 PPP1R1CQ8WVI7 109 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 TMEM242Q9NWH2 141 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 C6orf48Q9UBA6 75 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 TNFSF18Q9UNG2 199 aa0.69□□□□□ -2.3
SNX2-208ENST00000509281 CTXND1A0A1B0GTU2 59 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 F2Z2F3 143 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 I3L3M4 83 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 NDUFA1O15239 70 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 NUPR1O60356 82 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 BCE1O60756 84 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 NCR2O95944 276 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 CXCL1P09341 107 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 IGLC6P0CF74 106 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 FCER1GP30273 86 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 POLR2KP53803 58 aaKnown RBP0.68□□□□□ -2.3
SNX2-208ENST00000509281 SPAG11BQ08648 103 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 AKR1C8PQ5T2L2 129 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 RPL7L1Q6DKI1 246 aaKnown RBP0.68□□□□□ -2.3
SNX2-208ENST00000509281 SPAG11AQ6PDA7 123 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 Q6Q795 121 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 COX6B2Q6YFQ2 88 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 Q6ZQT0 140 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 C9orf62Q8N4C0 152 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 PLEKHB2Q96CS7 222 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 AP1S3Q96PC3 154 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 RNASE7Q9H1E1 156 aaKnown RBP0.68□□□□□ -2.3
SNX2-208ENST00000509281 CST9LQ9H4G1 147 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 ST20Q9HBF5 79 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 MED9Q9NWA0 146 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 MRPL35Q9NZE8 188 aaKnown RBP0.68□□□□□ -2.3
SNX2-208ENST00000509281 TOMM7Q9P0U1 55 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 SYNE2Q8WXH0 6885 aaKnown RBP0.68□□□□□ -2.3
SNX2-208ENST00000509281 SSPOA2VEC9 5147 aa0.68□□□□□ -2.3
SNX2-208ENST00000509281 BORCS7-ASMTA0A0B4J1R7 106 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 MAP1LC3B2A6NCE7 125 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 C9orf92A6NGG3 77 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 TMEM238C9JI98 176 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 F8W036 122 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 ZNF25P17030 456 aaPredicted RBP0.67□□□□□ -2.3
SNX2-208ENST00000509281 RPL35P42766 123 aaKnown RBP0.67□□□□□ -2.3
SNX2-208ENST00000509281 CKS1BP61024 79 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 RPL39P62891 51 aaKnown RBP0.67□□□□□ -2.3
SNX2-208ENST00000509281 PRLHP81277 87 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms