RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SPANXDQ9BXN6 97 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 TTTY13Q9BZ97 58 aa5.6□□□□□ -1.51
NUP54-207ENST00000508583 H0Y9J4 135 aa5.59□□□□□ -1.51
NUP54-207ENST00000508583 JOSD1Q15040 202 aaPredicted RBP5.59□□□□□ -1.51
NUP54-207ENST00000508583 KRTAP11-1Q8IUC1 163 aa5.59□□□□□ -1.51
NUP54-207ENST00000508583 PCP2Q8IVA1 136 aa5.59□□□□□ -1.51
NUP54-207ENST00000508583 LINC00518Q8N0U6 118 aa5.59□□□□□ -1.51
NUP54-207ENST00000508583 VAMP8Q9BV40 100 aa5.59□□□□□ -1.51
NUP54-207ENST00000508583 TMEM126AQ9H061 195 aa5.59□□□□□ -1.51
NUP54-207ENST00000508583 DDTP30046 118 aa5.58□□□□□ -1.52
NUP54-207ENST00000508583 NPC2P61916 151 aa5.58□□□□□ -1.52
NUP54-207ENST00000508583 Q8NDZ9 215 aa5.58□□□□□ -1.52
NUP54-207ENST00000508583 KCNQ1DNQ9H478 68 aa5.58□□□□□ -1.52
NUP54-207ENST00000508583 TRBV10-3A0A0K0K1G6 114 aa5.57□□□□□ -1.52
NUP54-207ENST00000508583 ETDCA0A1B0GVM5 59 aa5.57□□□□□ -1.52
NUP54-207ENST00000508583 COX8AP10176 69 aa5.57□□□□□ -1.52
NUP54-207ENST00000508583 HINT1P49773 126 aaPredicted RBP5.57□□□□□ -1.52
NUP54-207ENST00000508583 FAM19A1Q7Z5A9 133 aa5.57□□□□□ -1.52
NUP54-207ENST00000508583 DMBT1Q9UGM3 2413 aaPredicted RBP5.56□□□□□ -1.52
NUP54-207ENST00000508583 PKHD1L1Q86WI1 4243 aa5.56□□□□□ -1.52
NUP54-207ENST00000508583 DLEU1O43261 78 aa5.56□□□□□ -1.52
NUP54-207ENST00000508583 IGLV6-57P01721 117 aa5.56□□□□□ -1.52
NUP54-207ENST00000508583 SPATA45Q537H7 98 aa5.56□□□□□ -1.52
NUP54-207ENST00000508583 SOSTDC1Q6X4U4 206 aa5.56□□□□□ -1.52
NUP54-207ENST00000508583 LINC00337Q8N6G1 96 aa5.56□□□□□ -1.52
NUP54-207ENST00000508583 LINC01600Q96MT4 127 aa5.56□□□□□ -1.52
NUP54-207ENST00000508583 PAM16Q9Y3D7 125 aa5.56□□□□□ -1.52
NUP54-207ENST00000508583 OR13C6PQ8NH95 151 aa5.55□□□□□ -1.52
NUP54-207ENST00000508583 TRAV23DV6A0A075B6W5 121 aa5.54□□□□□ -1.52
NUP54-207ENST00000508583 SPRR1AP35321 89 aa5.54□□□□□ -1.52
NUP54-207ENST00000508583 RPL13AP40429 203 aaKnown RBP5.54□□□□□ -1.52
NUP54-207ENST00000508583 KRTAP13-1Q8IUC0 172 aa5.54□□□□□ -1.52
NUP54-207ENST00000508583 ZNF706Q9Y5V0 76 aaPredicted RBP5.54□□□□□ -1.52
NUP54-207ENST00000508583 TRAV13-2A0A0B4J235 113 aa5.53□□□□□ -1.52
NUP54-207ENST00000508583 PRLHP81277 87 aa5.53□□□□□ -1.52
NUP54-207ENST00000508583 SLC25A34Q6PIV7 304 aa5.53□□□□□ -1.52
NUP54-207ENST00000508583 MUSTN1Q8IVN3 82 aa5.53□□□□□ -1.52
NUP54-207ENST00000508583 HIST1H4GQ99525 98 aa5.53□□□□□ -1.52
NUP54-207ENST00000508583 LRP1Q07954 4544 aaKnown RBP5.53□□□□□ -1.52
NUP54-207ENST00000508583 ZNF73O43830 326 aaPredicted RBP5.52□□□□□ -1.53
NUP54-207ENST00000508583 PYY3Q5JQD4 70 aa5.52□□□□□ -1.53
NUP54-207ENST00000508583 HIGD2AQ9BW72 106 aa5.52□□□□□ -1.53
NUP54-207ENST00000508583 HIGD1BQ9P298 99 aa5.52□□□□□ -1.53
NUP54-207ENST00000508583 A6NDN8 102 aa5.51□□□□□ -1.53
NUP54-207ENST00000508583 KRTAP5-3Q6L8H2 238 aa5.51□□□□□ -1.53
NUP54-207ENST00000508583 Q6ZRX8 168 aa5.51□□□□□ -1.53
NUP54-207ENST00000508583 C14orf144Q96I85 54 aa5.51□□□□□ -1.53
NUP54-207ENST00000508583 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
NUP54-207ENST00000508583 KRTAP4-16G5E9R7 235 aaPredicted RBP5.5□□□□□ -1.53
NUP54-207ENST00000508583 B5MCH6 92 aa5.49□□□□□ -1.53
NUP54-207ENST00000508583 CRYGAP11844 174 aa5.49□□□□□ -1.53
NUP54-207ENST00000508583 TAL2Q16559 108 aa5.49□□□□□ -1.53
NUP54-207ENST00000508583 FAM229BQ4G0N7 80 aa5.49□□□□□ -1.53
NUP54-207ENST00000508583 TRBV7-6A0A0J9YX20 115 aa5.48□□□□□ -1.53
NUP54-207ENST00000508583 A4D1N5 150 aa5.48□□□□□ -1.53
NUP54-207ENST00000508583 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
NUP54-207ENST00000508583 DHRS4-AS1Q9P1J3 65 aa5.48□□□□□ -1.53
NUP54-207ENST00000508583 HERC1Q15751 4861 aa5.48□□□□□ -1.53
NUP54-207ENST00000508583 A0A1B0GWB2 263 aa5.47□□□□□ -1.53
NUP54-207ENST00000508583 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
NUP54-207ENST00000508583 KRTAP10-8P60410 259 aa5.47□□□□□ -1.53
NUP54-207ENST00000508583 VAMP3Q15836 100 aa5.47□□□□□ -1.53
NUP54-207ENST00000508583 UQCR10Q9UDW1 63 aa5.47□□□□□ -1.53
NUP54-207ENST00000508583 SMIM6P0DI80 62 aa5.46□□□□□ -1.54
NUP54-207ENST00000508583 COX7BP24311 80 aa5.46□□□□□ -1.54
NUP54-207ENST00000508583 ELOF1P60002 83 aaKnown RBP5.46□□□□□ -1.54
NUP54-207ENST00000508583 C6orf99Q4VX62 202 aa5.46□□□□□ -1.54
NUP54-207ENST00000508583 PRR26Q8N8Z3 221 aa5.46□□□□□ -1.54
NUP54-207ENST00000508583 SMCR5Q8TEV8 140 aa5.46□□□□□ -1.54
NUP54-207ENST00000508583 NHP2Q9NX24 153 aaKnown RBP5.46□□□□□ -1.54
NUP54-207ENST00000508583 TYMSOSQ8TAI1 123 aa5.45□□□□□ -1.54
NUP54-207ENST00000508583 RAB37Q96AX2 223 aa5.45□□□□□ -1.54
NUP54-207ENST00000508583 SPRR4Q96PI1 79 aa5.45□□□□□ -1.54
NUP54-207ENST00000508583 A0A0B4J2C4 111 aa5.44□□□□□ -1.54
NUP54-207ENST00000508583 SLC25A20O43772 301 aa5.44□□□□□ -1.54
NUP54-207ENST00000508583 HSD52Q0P140 79 aa5.44□□□□□ -1.54
NUP54-207ENST00000508583 C2orf91Q6ZV80 131 aa5.44□□□□□ -1.54
NUP54-207ENST00000508583 CEND1Q8N111 149 aa5.44□□□□□ -1.54
NUP54-207ENST00000508583 Q9BRP9 147 aa5.44□□□□□ -1.54
NUP54-207ENST00000508583 SNCGO76070 127 aa5.43□□□□□ -1.54
NUP54-207ENST00000508583 LINC00483Q53H64 154 aa5.43□□□□□ -1.54
NUP54-207ENST00000508583 BVES-AS1Q5T3Y7 98 aa5.43□□□□□ -1.54
NUP54-207ENST00000508583 SMIM11BQ8TCY0 68 aa5.43□□□□□ -1.54
NUP54-207ENST00000508583 A0A087X002 238 aa5.42□□□□□ -1.54
NUP54-207ENST00000508583 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
NUP54-207ENST00000508583 GAGE2AQ6NT46 116 aa5.42□□□□□ -1.54
NUP54-207ENST00000508583 CFC1BP0CG36 223 aa5.41□□□□□ -1.54
NUP54-207ENST00000508583 CFC1P0CG37 223 aa5.41□□□□□ -1.54
NUP54-207ENST00000508583 CTAG1AP78358 180 aa5.41□□□□□ -1.54
NUP54-207ENST00000508583 C12orf57Q99622 126 aa5.41□□□□□ -1.54
NUP54-207ENST00000508583 ANAPC11Q9NYG5 84 aa5.41□□□□□ -1.54
NUP54-207ENST00000508583 ERC2-IT1O76042 136 aa5.4□□□□□ -1.54
NUP54-207ENST00000508583 Q1RN00 199 aa5.4□□□□□ -1.54
NUP54-207ENST00000508583 SPAG11AQ6PDA7 123 aa5.39□□□□□ -1.55
NUP54-207ENST00000508583 PRO1854Q9UHT4 67 aa5.39□□□□□ -1.55
NUP54-207ENST00000508583 TNXBP22105 4242 aa5.38□□□□□ -1.55
NUP54-207ENST00000508583 TEX49A0A1B0GTD5 131 aa5.38□□□□□ -1.55
NUP54-207ENST00000508583 TSTD3H0UI37 97 aa5.38□□□□□ -1.55
NUP54-207ENST00000508583 H7C2G1 150 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms