RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 LINC00158P58513 81 aa4.54□□□□□ -1.68
SH3D19-208ENST00000508492 TMEM126AQ9H061 195 aa4.54□□□□□ -1.68
SH3D19-208ENST00000508492 NCR3O14931 201 aa4.53□□□□□ -1.68
SH3D19-208ENST00000508492 RPL13AP40429 203 aaKnown RBP4.53□□□□□ -1.68
SH3D19-208ENST00000508492 COX17Q14061 63 aa4.53□□□□□ -1.68
SH3D19-208ENST00000508492 FAM19A1Q7Z5A9 133 aa4.53□□□□□ -1.68
SH3D19-208ENST00000508492 FABP4P15090 132 aa4.52□□□□□ -1.69
SH3D19-208ENST00000508492 S100A1P23297 94 aa4.52□□□□□ -1.69
SH3D19-208ENST00000508492 PRR4Q16378 134 aa4.52□□□□□ -1.69
SH3D19-208ENST00000508492 MEIG1Q5JSS6 88 aa4.52□□□□□ -1.69
SH3D19-208ENST00000508492 MIR7-3HGQ8N6C7 128 aa4.52□□□□□ -1.69
SH3D19-208ENST00000508492 DAND5Q8N907 189 aa4.52□□□□□ -1.69
SH3D19-208ENST00000508492 TYMSOSQ8TAI1 123 aa4.52□□□□□ -1.69
SH3D19-208ENST00000508492 LEPROTL1O95214 131 aa4.51□□□□□ -1.69
SH3D19-208ENST00000508492 CRYGAP11844 174 aa4.51□□□□□ -1.69
SH3D19-208ENST00000508492 C3orf22Q8N5N4 141 aa4.51□□□□□ -1.69
SH3D19-208ENST00000508492 RETNLBQ9BQ08 111 aa4.51□□□□□ -1.69
SH3D19-208ENST00000508492 BOD1L2Q8IYS8 172 aa4.5□□□□□ -1.69
SH3D19-208ENST00000508492 HIGD2AQ9BW72 106 aa4.5□□□□□ -1.69
SH3D19-208ENST00000508492 NDUFA12Q9UI09 145 aa4.5□□□□□ -1.69
SH3D19-208ENST00000508492 Q8N377 158 aa4.49□□□□□ -1.69
SH3D19-208ENST00000508492 PLEKHB2Q96CS7 222 aa4.49□□□□□ -1.69
SH3D19-208ENST00000508492 TRBV10-3A0A0K0K1G6 114 aa4.48□□□□□ -1.69
SH3D19-208ENST00000508492 LEPROTO15243 131 aa4.48□□□□□ -1.69
SH3D19-208ENST00000508492 NPC2P61916 151 aa4.48□□□□□ -1.69
SH3D19-208ENST00000508492 SFTA2Q6UW10 78 aa4.48□□□□□ -1.69
SH3D19-208ENST00000508492 SOSTDC1Q6X4U4 206 aa4.48□□□□□ -1.69
SH3D19-208ENST00000508492 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 MYMXA0A1B0GTQ4 84 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 KRTAP4-16G5E9R7 235 aaPredicted RBP4.47□□□□□ -1.69
SH3D19-208ENST00000508492 J3QQQ9 107 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST1H2BKO60814 126 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 DPM2O94777 84 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 IGKCP01834 107 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST1H2BJP06899 126 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST1H2BOP23527 126 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST1H2BBP33778 126 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 SPRR1AP35321 89 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST1H2BDP58876 126 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST1H2BCP62807 126 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST2H2BEQ16778 126 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 FAM229BQ4G0N7 80 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.47□□□□□ -1.69
SH3D19-208ENST00000508492 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST1H2BHQ93079 126 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 SPRR4Q96PI1 79 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST1H2BNQ99877 126 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 HIST1H2BMQ99879 126 aa4.47□□□□□ -1.69
SH3D19-208ENST00000508492 SMCR5Q8TEV8 140 aa4.46□□□□□ -1.7
SH3D19-208ENST00000508492 PPDPFQ9H3Y8 114 aa4.46□□□□□ -1.7
SH3D19-208ENST00000508492 HSPB8Q9UJY1 196 aa4.46□□□□□ -1.7
SH3D19-208ENST00000508492 IGKV2D-26A0A0A0MRZ7 120 aa4.45□□□□□ -1.7
SH3D19-208ENST00000508492 ERC2-IT1O76042 136 aa4.45□□□□□ -1.7
SH3D19-208ENST00000508492 PLNP26678 52 aa4.45□□□□□ -1.7
SH3D19-208ENST00000508492 TTTY13Q9BZ97 58 aa4.45□□□□□ -1.7
SH3D19-208ENST00000508492 KCNQ1DNQ9H478 68 aa4.45□□□□□ -1.7
SH3D19-208ENST00000508492 A0A0J9YXY3 114 aa4.44□□□□□ -1.7
SH3D19-208ENST00000508492 SYS1-DBNDD2H3BUS1 97 aa4.44□□□□□ -1.7
SH3D19-208ENST00000508492 LGALS3P17931 250 aaKnown RBP4.44□□□□□ -1.7
SH3D19-208ENST00000508492 LINC00337Q8N6G1 96 aa4.44□□□□□ -1.7
SH3D19-208ENST00000508492 MAP1LC3CQ9BXW4 147 aa4.44□□□□□ -1.7
SH3D19-208ENST00000508492 LOC107984156A0A0G2JMH3 177 aa4.43□□□□□ -1.7
SH3D19-208ENST00000508492 ETDCA0A1B0GVM5 59 aa4.43□□□□□ -1.7
SH3D19-208ENST00000508492 E9PLD3 99 aa4.43□□□□□ -1.7
SH3D19-208ENST00000508492 DDTP30046 118 aa4.43□□□□□ -1.7
SH3D19-208ENST00000508492 HERVK_113P61574 105 aa4.43□□□□□ -1.7
SH3D19-208ENST00000508492 COA6Q5JTJ3 125 aaKnown RBP4.43□□□□□ -1.7
SH3D19-208ENST00000508492 ARL17AQ8IVW1 177 aa4.43□□□□□ -1.7
SH3D19-208ENST00000508492 Q9BRP9 147 aa4.43□□□□□ -1.7
SH3D19-208ENST00000508492 TRBV10-2A0A0K0K1G8 114 aa4.41□□□□□ -1.7
SH3D19-208ENST00000508492 KRTAP16-1A8MUX0 517 aa4.41□□□□□ -1.7
SH3D19-208ENST00000508492 LINC00587B1AMM8 73 aa4.41□□□□□ -1.7
SH3D19-208ENST00000508492 IGLV6-57P01721 117 aa4.41□□□□□ -1.7
SH3D19-208ENST00000508492 C3orf79P0CE67 100 aa4.41□□□□□ -1.7
SH3D19-208ENST00000508492 NMUP48645 174 aa4.41□□□□□ -1.7
SH3D19-208ENST00000508492 LINC01545Q5VT33 79 aa4.41□□□□□ -1.7
SH3D19-208ENST00000508492 SPANXB1Q9NS25 103 aaPredicted RBP4.41□□□□□ -1.7
SH3D19-208ENST00000508492 MUC2Q02817 5179 aa4.4□□□□□ -1.71
SH3D19-208ENST00000508492 LINC00483Q53H64 154 aa4.4□□□□□ -1.71
SH3D19-208ENST00000508492 MIEN1Q9BRT3 115 aa4.4□□□□□ -1.71
SH3D19-208ENST00000508492 TRAV23DV6A0A075B6W5 121 aa4.39□□□□□ -1.71
SH3D19-208ENST00000508492 NDUFC2O95298 119 aa4.39□□□□□ -1.71
SH3D19-208ENST00000508492 KRTDAPP60985 99 aa4.39□□□□□ -1.71
SH3D19-208ENST00000508492 MOBPQ13875 183 aa4.39□□□□□ -1.71
SH3D19-208ENST00000508492 S100A7L2Q5SY68 101 aa4.39□□□□□ -1.71
SH3D19-208ENST00000508492 Q6ZRX8 168 aa4.39□□□□□ -1.71
SH3D19-208ENST00000508492 ATOH7Q8N100 152 aa4.39□□□□□ -1.71
SH3D19-208ENST00000508492 ST20-AS1Q8NBB2 130 aa4.39□□□□□ -1.71
SH3D19-208ENST00000508492 LINC00308Q8TCZ7 52 aa4.39□□□□□ -1.71
SH3D19-208ENST00000508492 ZNF706Q9Y5V0 76 aaPredicted RBP4.39□□□□□ -1.71
SH3D19-208ENST00000508492 ZNF815PA8K554 130 aa4.38□□□□□ -1.71
SH3D19-208ENST00000508492 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
SH3D19-208ENST00000508492 TPRXLQ17RH7 258 aa4.37□□□□□ -1.71
SH3D19-208ENST00000508492 ZNF73O43830 326 aaPredicted RBP4.36□□□□□ -1.71
SH3D19-208ENST00000508492 HIST3H2BBQ8N257 126 aa4.36□□□□□ -1.71
SH3D19-208ENST00000508492 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
SH3D19-208ENST00000508492 TIMM17BO60830 172 aa4.35□□□□□ -1.71
SH3D19-208ENST00000508492 S100A12P80511 92 aa4.35□□□□□ -1.71
SH3D19-208ENST00000508492 SPAG11AQ6PDA7 123 aa4.35□□□□□ -1.71
SH3D19-208ENST00000508492 PCP2Q8IVA1 136 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms